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Volumn 6, Issue 7, 2011, Pages

MRNA levels in control rat liver display strain-specific, Hereditary, and AHR-dependent components

Author keywords

[No Author keywords available]

Indexed keywords

AROMATIC HYDROCARBON RECEPTOR; DNA BINDING PROTEIN; MESSENGER RNA; TRANSCRIPTION FACTOR;

EID: 79960088990     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0018337     Document Type: Article
Times cited : (7)

References (58)
  • 1
    • 0037184855 scopus 로고    scopus 로고
    • Genomic interrogation of mechanism(s) underlying cellular responses to toxicants
    • Amin RP, Hamadeh HK, Bushel PR, Bennett L, Afshari CA, et al. (2002) Genomic interrogation of mechanism(s) underlying cellular responses to toxicants. Toxicology 181-182: 555-563.
    • (2002) Toxicology , vol.181-182 , pp. 555-563
    • Amin, R.P.1    Hamadeh, H.K.2    Bushel, P.R.3    Bennett, L.4    Afshari, C.A.5
  • 2
    • 33645124061 scopus 로고    scopus 로고
    • dbZach: A MIAME-compliant toxicogenomic supportive relational database
    • Burgoon LD, Boutros PC, Dere E, Zacharewski TR, (2006) dbZach: A MIAME-compliant toxicogenomic supportive relational database. Toxicol Sci 90: 558-568.
    • (2006) Toxicol Sci , vol.90 , pp. 558-568
    • Burgoon, L.D.1    Boutros, P.C.2    Dere, E.3    Zacharewski, T.R.4
  • 3
    • 33748495591 scopus 로고    scopus 로고
    • Rat toxicogenomic study reveals analytical consistency across microarray platforms
    • Guo L, Lobenhofer EK, Wang C, Shippy R, Harris SC, et al. (2006) Rat toxicogenomic study reveals analytical consistency across microarray platforms. Nat Biotechnol 24: 1162-1169.
    • (2006) Nat Biotechnol , vol.24 , pp. 1162-1169
    • Guo, L.1    Lobenhofer, E.K.2    Wang, C.3    Shippy, R.4    Harris, S.C.5
  • 4
    • 0036250938 scopus 로고    scopus 로고
    • Rat genetics: attaching physiology and pharmacology to the genome
    • Jacob HJ, Kwitek AE, (2002) Rat genetics: attaching physiology and pharmacology to the genome. Nat Rev Genet 3: 33-42.
    • (2002) Nat Rev Genet , vol.3 , pp. 33-42
    • Jacob, H.J.1    Kwitek, A.E.2
  • 6
    • 33750479344 scopus 로고    scopus 로고
    • Toxicogenomics strategies for predicting drug toxicity
    • Martin R, Rose D, Yu K, Barros S, (2006) Toxicogenomics strategies for predicting drug toxicity. Pharmacogenomics 7: 1003-1016.
    • (2006) Pharmacogenomics , vol.7 , pp. 1003-1016
    • Martin, R.1    Rose, D.2    Yu, K.3    Barros, S.4
  • 8
    • 0035733752 scopus 로고    scopus 로고
    • The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster
    • Jin W, Riley RM, Wolfinger RD, White KP, Passador-Gurgel G, et al. (2001) The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster. Nat Genet 29: 389-395.
    • (2001) Nat Genet , vol.29 , pp. 389-395
    • Jin, W.1    Riley, R.M.2    Wolfinger, R.D.3    White, K.P.4    Passador-Gurgel, G.5
  • 9
    • 0037504137 scopus 로고    scopus 로고
    • Sex-dependent gene expression and evolution of the Drosophila transcriptome
    • Ranz JM, Castillo-Davis CI, Meiklejohn CD, Hartl DL, (2003) Sex-dependent gene expression and evolution of the Drosophila transcriptome. Science 300: 1742-1745.
    • (2003) Science , vol.300 , pp. 1742-1745
    • Ranz, J.M.1    Castillo-Davis, C.I.2    Meiklejohn, C.D.3    Hartl, D.L.4
  • 10
    • 2442528767 scopus 로고    scopus 로고
    • Hippocampal gene expression profiling across eight mouse inbred strains: towards understanding the molecular basis for behaviour
    • Fernandes C, Paya-Cano JL, Sluyter F, D'Souza U, Plomin R, et al. (2004) Hippocampal gene expression profiling across eight mouse inbred strains: towards understanding the molecular basis for behaviour. Eur J Neurosci 19: 2576-2582.
    • (2004) Eur J Neurosci , vol.19 , pp. 2576-2582
    • Fernandes, C.1    Paya-Cano, J.L.2    Sluyter, F.3    D'Souza, U.4    Plomin, R.5
  • 11
    • 0002221924 scopus 로고    scopus 로고
    • Expression profiling identifies strain-specific changes associated with ethanol withdrawal in mice
    • Daniels GM, Buck KJ, (2002) Expression profiling identifies strain-specific changes associated with ethanol withdrawal in mice. Genes Brain Behav 1: 35-45.
    • (2002) Genes Brain Behav , vol.1 , pp. 35-45
    • Daniels, G.M.1    Buck, K.J.2
  • 12
    • 0037370311 scopus 로고    scopus 로고
    • Natural variation in human gene expression assessed in lymphoblastoid cells
    • Cheung VG, Conlin LK, Weber TM, Arcaro M, Jen KY, et al. (2003) Natural variation in human gene expression assessed in lymphoblastoid cells. Nat Genet 33: 422-425.
    • (2003) Nat Genet , vol.33 , pp. 422-425
    • Cheung, V.G.1    Conlin, L.K.2    Weber, T.M.3    Arcaro, M.4    Jen, K.Y.5
  • 13
    • 4043128071 scopus 로고    scopus 로고
    • Genetic analysis of genome-wide variation in human gene expression
    • Morley M, Molony CM, Weber TM, Devlin JL, Ewens KG, et al. (2004) Genetic analysis of genome-wide variation in human gene expression. Nature 430: 743-747.
    • (2004) Nature , vol.430 , pp. 743-747
    • Morley, M.1    Molony, C.M.2    Weber, T.M.3    Devlin, J.L.4    Ewens, K.G.5
  • 14
    • 27644482314 scopus 로고    scopus 로고
    • Mapping determinants of human gene expression by regional and genome-wide association
    • Cheung VG, Spielman RS, Ewens KG, Weber TM, Morley M, et al. (2005) Mapping determinants of human gene expression by regional and genome-wide association. Nature 437: 1365-1369.
    • (2005) Nature , vol.437 , pp. 1365-1369
    • Cheung, V.G.1    Spielman, R.S.2    Ewens, K.G.3    Weber, T.M.4    Morley, M.5
  • 15
    • 33750204290 scopus 로고    scopus 로고
    • Genetics of global gene expression
    • Rockman MV, Kruglyak L, (2006) Genetics of global gene expression. Nat Rev Genet 7: 862-872.
    • (2006) Nat Rev Genet , vol.7 , pp. 862-872
    • Rockman, M.V.1    Kruglyak, L.2
  • 17
    • 0037456823 scopus 로고    scopus 로고
    • Genetics of gene expression surveyed in maize, mouse and man
    • Schadt EE, Monks SA, Drake TA, Lusis AJ, Che N, et al. (2003) Genetics of gene expression surveyed in maize, mouse and man. Nature 422: 297-302.
    • (2003) Nature , vol.422 , pp. 297-302
    • Schadt, E.E.1    Monks, S.A.2    Drake, T.A.3    Lusis, A.J.4    Che, N.5
  • 18
    • 33749594709 scopus 로고    scopus 로고
    • Background gene expression in rat kidney: influence of strain, gender, and diet
    • Seidel SD, Hung SC, Lynn Kan H, Bhaskar Gollapudi B, (2006) Background gene expression in rat kidney: influence of strain, gender, and diet. Toxicol Sci 94: 226-233.
    • (2006) Toxicol Sci , vol.94 , pp. 226-233
    • Seidel, S.D.1    Hung, S.C.2    Lynn Kan, H.3    Bhaskar Gollapudi, B.4
  • 19
    • 34248194221 scopus 로고    scopus 로고
    • Transcriptional alterations in the left ventricle of three hypertensive rat models
    • Cerutti C, Kurdi M, Bricca G, Hodroj W, Paultre C, et al. (2006) Transcriptional alterations in the left ventricle of three hypertensive rat models. Physiol Genomics 27: 295-308.
    • (2006) Physiol Genomics , vol.27 , pp. 295-308
    • Cerutti, C.1    Kurdi, M.2    Bricca, G.3    Hodroj, W.4    Paultre, C.5
  • 20
    • 47249097168 scopus 로고    scopus 로고
    • Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories
    • Boedigheimer MJ, Wolfinger RD, Bass MB, Bushel PR, Chou JW, et al. (2008) Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories. BMC Genomics 9: 285.
    • (2008) BMC Genomics , vol.9 , pp. 285
    • Boedigheimer, M.J.1    Wolfinger, R.D.2    Bass, M.B.3    Bushel, P.R.4    Chou, J.W.5
  • 21
    • 33745035864 scopus 로고    scopus 로고
    • The contributions of normal variation and genetic background to mammalian gene expression
    • Pritchard C, Coil D, Hawley S, Hsu L, Nelson PS, (2006) The contributions of normal variation and genetic background to mammalian gene expression. Genome Biol 7: R26.
    • (2006) Genome Biol , vol.7
    • Pritchard, C.1    Coil, D.2    Hawley, S.3    Hsu, L.4    Nelson, P.S.5
  • 22
    • 0033062111 scopus 로고    scopus 로고
    • The AH receptor and a novel gene determine acute toxic responses to TCDD: segregation of the resistant alleles to different rat lines
    • Tuomisto JT, Viluksela M, Pohjanvirta R, Tuomisto J, (1999) The AH receptor and a novel gene determine acute toxic responses to TCDD: segregation of the resistant alleles to different rat lines. Toxicol Appl Pharmacol 155: 71-81.
    • (1999) Toxicol Appl Pharmacol , vol.155 , pp. 71-81
    • Tuomisto, J.T.1    Viluksela, M.2    Pohjanvirta, R.3    Tuomisto, J.4
  • 23
    • 23844434593 scopus 로고    scopus 로고
    • Unsupervised pattern recognition: an introduction to the whys and wherefores of clustering microarray data
    • Boutros PC, Okey AB, (2005) Unsupervised pattern recognition: an introduction to the whys and wherefores of clustering microarray data. Brief Bioinform 6: 331-343.
    • (2005) Brief Bioinform , vol.6 , pp. 331-343
    • Boutros, P.C.1    Okey, A.B.2
  • 24
    • 33750352288 scopus 로고    scopus 로고
    • Gene expression profiling in cervical cancer: an exploration of intratumor heterogeneity
    • Bachtiary B, Boutros PC, Pintilie M, Shi W, Bastianutto C, et al. (2006) Gene expression profiling in cervical cancer: an exploration of intratumor heterogeneity. Clin Cancer Res 12: 5632-5640.
    • (2006) Clin Cancer Res , vol.12 , pp. 5632-5640
    • Bachtiary, B.1    Boutros, P.C.2    Pintilie, M.3    Shi, W.4    Bastianutto, C.5
  • 25
    • 4544341015 scopus 로고    scopus 로고
    • Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments
    • Smyth GK, (2003) Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments. Stat App Genet Mol Biol 3: 1-26.
    • (2003) Stat App Genet Mol Biol , vol.3 , pp. 1-26
    • Smyth, G.K.1
  • 26
    • 1842684068 scopus 로고    scopus 로고
    • Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    • Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, et al. (2004) Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature 428: 493-521.
    • (2004) Nature , vol.428 , pp. 493-521
    • Gibbs, R.A.1    Weinstock, G.M.2    Metzker, M.L.3    Muzny, D.M.4    Sodergren, E.J.5
  • 27
    • 0028303135 scopus 로고
    • Molecular biology of the aromatic hydrocarbon (dioxin) receptor
    • Okey AB, Riddick DS, Harper PA, (1994) Molecular biology of the aromatic hydrocarbon (dioxin) receptor. Trends Pharmacol Sci 15: 226-232.
    • (1994) Trends Pharmacol Sci , vol.15 , pp. 226-232
    • Okey, A.B.1    Riddick, D.S.2    Harper, P.A.3
  • 28
    • 34548363297 scopus 로고    scopus 로고
    • The aryl hydrocarbon receptor sans xenobiotics: endogenous function in genetic model systems
    • McMillan BJ, Bradfield CA, (2007) The aryl hydrocarbon receptor sans xenobiotics: endogenous function in genetic model systems. Mol Pharmacol 72: 487-498.
    • (2007) Mol Pharmacol , vol.72 , pp. 487-498
    • McMillan, B.J.1    Bradfield, C.A.2
  • 29
    • 34447530842 scopus 로고    scopus 로고
    • An aryl hydrocarbon receptor odyssey to the shores of toxicology: the Deichmann Lecture, International Congress of Toxicology-XI
    • Okey AB, (2007) An aryl hydrocarbon receptor odyssey to the shores of toxicology: the Deichmann Lecture, International Congress of Toxicology-XI. Toxicol Sci 98: 5-38.
    • (2007) Toxicol Sci , vol.98 , pp. 5-38
    • Okey, A.B.1
  • 30
    • 0031845222 scopus 로고    scopus 로고
    • Point mutation in intron sequence causes altered carboxyl-terminal structure in the aryl hydrocarbon receptor of the most 2,3,7,8-tetrachlorodibenzo-p-dioxin-resistant rat strain
    • Pohjanvirta R, Wong JM, Li W, Harper PA, Tuomisto J, et al. (1998) Point mutation in intron sequence causes altered carboxyl-terminal structure in the aryl hydrocarbon receptor of the most 2,3,7,8-tetrachlorodibenzo-p-dioxin-resistant rat strain. Mol Pharmacol 54: 86-93.
    • (1998) Mol Pharmacol , vol.54 , pp. 86-93
    • Pohjanvirta, R.1    Wong, J.M.2    Li, W.3    Harper, P.A.4    Tuomisto, J.5
  • 31
    • 77951210260 scopus 로고    scopus 로고
    • Aryl hydrocarbon receptor (AHR)-regulated transcriptomic changes in rats sensitive or resistant to major dioxin toxicities
    • Moffat ID, Boutros PC, Chen H, Okey AB, Pohjanvirta R, (2010) Aryl hydrocarbon receptor (AHR)-regulated transcriptomic changes in rats sensitive or resistant to major dioxin toxicities. BMC Genomics 11: 263.
    • (2010) BMC Genomics , vol.11 , pp. 263
    • Moffat, I.D.1    Boutros, P.C.2    Chen, H.3    Okey, A.B.4    Pohjanvirta, R.5
  • 32
    • 71049126064 scopus 로고    scopus 로고
    • Dioxin-dependent and dioxin-independent gene batteries: comparison of liver and kidney in AHR-null mice
    • Boutros PC, Bielefeld KA, Pohjanvirta R, Harper PA, (2009) Dioxin-dependent and dioxin-independent gene batteries: comparison of liver and kidney in AHR-null mice. Toxicol Sci 112: 245-256.
    • (2009) Toxicol Sci , vol.112 , pp. 245-256
    • Boutros, P.C.1    Bielefeld, K.A.2    Pohjanvirta, R.3    Harper, P.A.4
  • 33
    • 30044452058 scopus 로고    scopus 로고
    • Aryl hydrocarbon receptor regulates distinct dioxin-dependent and dioxin-independent gene batteries
    • Tijet N, Boutros PC, Moffat ID, Okey AB, Tuomisto J, et al. (2006) Aryl hydrocarbon receptor regulates distinct dioxin-dependent and dioxin-independent gene batteries. Mol Pharmacol 69: 140-153.
    • (2006) Mol Pharmacol , vol.69 , pp. 140-153
    • Tijet, N.1    Boutros, P.C.2    Moffat, I.D.3    Okey, A.B.4    Tuomisto, J.5
  • 34
    • 53349100942 scopus 로고    scopus 로고
    • Transcriptomic responses to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) in liver: comparison of rat and mouse
    • Boutros PC, Yan R, Moffat ID, Pohjanvirta R, Okey AB, (2008) Transcriptomic responses to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) in liver: comparison of rat and mouse. BMC Genomics 9: 419.
    • (2008) BMC Genomics , vol.9 , pp. 419
    • Boutros, P.C.1    Yan, R.2    Moffat, I.D.3    Pohjanvirta, R.4    Okey, A.B.5
  • 35
    • 33751440795 scopus 로고    scopus 로고
    • Comparative toxicogenomic analysis of the hepatotoxic effects of TCDD in Sprague Dawley rats and C57BL/6 mice
    • Boverhof DR, Burgoon LD, Tashiro C, Sharratt B, Chittim B, et al. (2006) Comparative toxicogenomic analysis of the hepatotoxic effects of TCDD in Sprague Dawley rats and C57BL/6 mice. Toxicol Sci 94: 398-416.
    • (2006) Toxicol Sci , vol.94 , pp. 398-416
    • Boverhof, D.R.1    Burgoon, L.D.2    Tashiro, C.3    Sharratt, B.4    Chittim, B.5
  • 36
    • 0038175144 scopus 로고    scopus 로고
    • GoMiner: a resource for biological interpretation of genomic and proteomic data
    • Zeeberg BR, Feng W, Wang G, Wang MD, Fojo AT, et al. (2003) GoMiner: a resource for biological interpretation of genomic and proteomic data. Genome Biol 4: R28.
    • (2003) Genome Biol , vol.4
    • Zeeberg, B.R.1    Feng, W.2    Wang, G.3    Wang, M.D.4    Fojo, A.T.5
  • 37
  • 40
    • 0037137519 scopus 로고    scopus 로고
    • A gene-expression signature as a predictor of survival in breast cancer
    • van de Vijver MJ, He YD, van't Veer LJ, Dai H, Hart AA, et al. (2002) A gene-expression signature as a predictor of survival in breast cancer. N Engl J Med 347: 1999-2009.
    • (2002) N Engl J Med , vol.347 , pp. 1999-2009
    • van de Vijver, M.J.1    He, Y.D.2    van't Veer, L.J.3    Dai, H.4    Hart, A.A.5
  • 41
    • 33846011470 scopus 로고    scopus 로고
    • A five-gene signature and clinical outcome in non-small-cell lung cancer
    • Chen HY, Yu SL, Chen CH, Chang GC, Chen CY, et al. (2007) A five-gene signature and clinical outcome in non-small-cell lung cancer. N Engl J Med 356: 11-20.
    • (2007) N Engl J Med , vol.356 , pp. 11-20
    • Chen, H.Y.1    Yu, S.L.2    Chen, C.H.3    Chang, G.C.4    Chen, C.Y.5
  • 42
    • 33751329250 scopus 로고    scopus 로고
    • Global variation in copy number in the human genome
    • Redon R, Ishikawa S, Fitch KR, Feuk L, Perry GH, et al. (2006) Global variation in copy number in the human genome. Nature 444: 444-454.
    • (2006) Nature , vol.444 , pp. 444-454
    • Redon, R.1    Ishikawa, S.2    Fitch, K.R.3    Feuk, L.4    Perry, G.H.5
  • 43
    • 38849101781 scopus 로고    scopus 로고
    • Significant gene content variation characterizes the genomes of inbred mouse strains
    • Cutler G, Marshall LA, Chin N, Baribault H, Kassner PD, (2007) Significant gene content variation characterizes the genomes of inbred mouse strains. Genome Res 17: 1743-1754.
    • (2007) Genome Res , vol.17 , pp. 1743-1754
    • Cutler, G.1    Marshall, L.A.2    Chin, N.3    Baribault, H.4    Kassner, P.D.5
  • 44
    • 0034116376 scopus 로고    scopus 로고
    • The PAS superfamily: sensors of environmental and developmental signals
    • Gu YZ, Hogenesch JB, Bradfield CA, (2000) The PAS superfamily: sensors of environmental and developmental signals. Annu Rev Pharmacol Toxicol 40: 519-561.
    • (2000) Annu Rev Pharmacol Toxicol , vol.40 , pp. 519-561
    • Gu, Y.Z.1    Hogenesch, J.B.2    Bradfield, C.A.3
  • 45
    • 0033037797 scopus 로고    scopus 로고
    • Physicochemical differences in the AH receptors of the most TCDD-susceptible and the most TCDD-resistant rat strains
    • Pohjanvirta R, Viluksela M, Tuomisto JT, Unkila M, Karasinska J, et al. (1999) Physicochemical differences in the AH receptors of the most TCDD-susceptible and the most TCDD-resistant rat strains. Toxicol Appl Pharmacol 155: 82-95.
    • (1999) Toxicol Appl Pharmacol , vol.155 , pp. 82-95
    • Pohjanvirta, R.1    Viluksela, M.2    Tuomisto, J.T.3    Unkila, M.4    Karasinska, J.5
  • 46
    • 0344393077 scopus 로고    scopus 로고
    • Cardiac hypertrophy in aryl hydrocarbon receptor null mice is correlated with elevated angiotensin II, endothelin-1, and mean arterial blood pressure
    • Lund AK, Goens MB, Kanagy NL, Walker MK, (2003) Cardiac hypertrophy in aryl hydrocarbon receptor null mice is correlated with elevated angiotensin II, endothelin-1, and mean arterial blood pressure. Toxicol Appl Pharmacol 193: 177-187.
    • (2003) Toxicol Appl Pharmacol , vol.193 , pp. 177-187
    • Lund, A.K.1    Goens, M.B.2    Kanagy, N.L.3    Walker, M.K.4
  • 47
    • 35448972542 scopus 로고    scopus 로고
    • Aryl hydrocarbon receptor nuclear translocator-like (BMAL1) is associated with susceptibility to hypertension and type 2 diabetes
    • Woon PY, Kaisaki PJ, Braganca J, Bihoreau MT, Levy JC, et al. (2007) Aryl hydrocarbon receptor nuclear translocator-like (BMAL1) is associated with susceptibility to hypertension and type 2 diabetes. Proc Natl Acad Sci U S A 104: 14412-14417.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 14412-14417
    • Woon, P.Y.1    Kaisaki, P.J.2    Braganca, J.3    Bihoreau, M.T.4    Levy, J.C.5
  • 48
    • 26944440912 scopus 로고    scopus 로고
    • Hepatic gene expression changes throughout the day in the Fischer rat: implications for toxicogenomic experiments
    • Boorman GA, Blackshear PE, Parker JS, Lobenhofer EK, Malarkey DE, et al. (2005) Hepatic gene expression changes throughout the day in the Fischer rat: implications for toxicogenomic experiments. Toxicol Sci 86: 185-193.
    • (2005) Toxicol Sci , vol.86 , pp. 185-193
    • Boorman, G.A.1    Blackshear, P.E.2    Parker, J.S.3    Lobenhofer, E.K.4    Malarkey, D.E.5
  • 49
    • 0025708370 scopus 로고
    • Mechanism of action of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD)
    • Pohjanvirta R, Tuomisto J, (1990) Mechanism of action of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). Toxicol Appl Pharmacol 105: 508-509.
    • (1990) Toxicol Appl Pharmacol , vol.105 , pp. 508-509
    • Pohjanvirta, R.1    Tuomisto, J.2
  • 50
    • 44649131231 scopus 로고    scopus 로고
    • Genome-wide effects of acute progressive feed restriction in liver and white adipose tissue
    • Pohjanvirta R, Boutros PC, Moffat ID, Linden J, Wendelin D, et al. (2008) Genome-wide effects of acute progressive feed restriction in liver and white adipose tissue. Toxicol Appl Pharmacol 230: 41-56.
    • (2008) Toxicol Appl Pharmacol , vol.230 , pp. 41-56
    • Pohjanvirta, R.1    Boutros, P.C.2    Moffat, I.D.3    Linden, J.4    Wendelin, D.5
  • 51
    • 57249111720 scopus 로고    scopus 로고
    • Patterns of dioxin-altered mRNA expression in livers of dioxin-sensitive versus dioxin-resistant rats
    • Franc MA, Moffat ID, Boutros PC, Tuomisto JT, Tuomisto J, et al. (2008) Patterns of dioxin-altered mRNA expression in livers of dioxin-sensitive versus dioxin-resistant rats. Arch Toxicol 82: 809-830.
    • (2008) Arch Toxicol , vol.82 , pp. 809-830
    • Franc, M.A.1    Moffat, I.D.2    Boutros, P.C.3    Tuomisto, J.T.4    Tuomisto, J.5
  • 52
    • 1342288026 scopus 로고    scopus 로고
    • Affy-analysis of Affymetrix GeneChip data at the probe level
    • Gautier L, Cope L, Bolstad BM, Irizarry RA, (2004) affy-analysis of Affymetrix GeneChip data at the probe level. Bioinformatics 20: 307-315.
    • (2004) Bioinformatics , vol.20 , pp. 307-315
    • Gautier, L.1    Cope, L.2    Bolstad, B.M.3    Irizarry, R.A.4
  • 54
    • 0035992248 scopus 로고    scopus 로고
    • Empirical bayes methods and false discovery rates for microarrays
    • Efron B, Tibshirani R, (2002) Empirical bayes methods and false discovery rates for microarrays. Genet Epidemiol 23: 70-86.
    • (2002) Genet Epidemiol , vol.23 , pp. 70-86
    • Efron, B.1    Tibshirani, R.2
  • 55
    • 1842584947 scopus 로고    scopus 로고
    • Applied bioinformatics for the identification of regulatory elements
    • Wasserman WW, Sandelin A, (2004) Applied bioinformatics for the identification of regulatory elements. Nat Rev Genet 5: 276-287.
    • (2004) Nat Rev Genet , vol.5 , pp. 276-287
    • Wasserman, W.W.1    Sandelin, A.2
  • 56
    • 2542584654 scopus 로고    scopus 로고
    • Detection of functional DNA motifs via statistical over-representation
    • Frith MC, Fu Y, Yu L, Chen JF, Hansen U, et al. (2004) Detection of functional DNA motifs via statistical over-representation. Nucleic Acids Res 32: 1372-1381.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1372-1381
    • Frith, M.C.1    Fu, Y.2    Yu, L.3    Chen, J.F.4    Hansen, U.5
  • 57
    • 0347125328 scopus 로고    scopus 로고
    • JASPAR: an open-access database for eukaryotic transcription factor binding profiles
    • Sandelin A, Alkema W, Engstrom P, Wasserman WW, Lenhard B, (2004) JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic Acids Res 32 Database issue: D91-94.
    • (2004) Nucleic Acids Res , vol.32 , Issue.Database issue , pp. 91-94
    • Sandelin, A.1    Alkema, W.2    Engstrom, P.3    Wasserman, W.W.4    Lenhard, B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.