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Volumn 45, Issue 13, 2011, Pages 5652-5659

Combining land use information and small stream sampling with PCR-based methods for better characterization of diffuse sources of human fecal pollution

Author keywords

[No Author keywords available]

Indexed keywords

AMBIENT WATERS; CLIMATE INFORMATION; COMPUTER-BASED MODELING; CULTURE-BASED METHODS; DIFFUSE POLLUTION; DIFFUSE SOURCES; ENVIRONMENTAL WATER; FECAL POLLUTION; GENETIC MARKERS; HIGH RESOLUTION; HUMAN FECAL POLLUTION; NEGATIVE CORRELATION; QUANTITATIVE REAL TIME PCR; RECEIVING WATERS; SEPTIC SYSTEM; SEWER LINES; SMALL STREAMS; STUDY AREAS; WATER SAMPLING; WET WEATHER;

EID: 79959867131     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es2003167     Document Type: Article
Times cited : (56)

References (32)
  • 3
    • 79956151802 scopus 로고    scopus 로고
    • EPA # 832-F-08-057; U.S. Environmental Protection Agency: Washington, DC
    • Septic systems fact sheet, EPA # 832-F-08-057; U.S. Environmental Protection Agency: Washington, DC, 2008.
    • (2008) Septic Systems Fact Sheet
  • 6
    • 79959911137 scopus 로고    scopus 로고
    • Comparison of quantitative PCR assays for Eschrichia coli Targeting Ribosomal RNA and single copy genes
    • Chern, E. C.; Siefring, S.; Paar, J.; Doolittle, M.; Haugland, R. A., Comparison of quantitative PCR assays for Eschrichia coli Targeting Ribosomal RNA and single copy genes. Lett. Appl. Microbiol. 2010.
    • (2010) Lett. Appl. Microbiol.
    • Chern, E.C.1    Siefring, S.2    Paar, J.3    Doolittle, M.4    Haugland, R.A.5
  • 7
    • 13544256490 scopus 로고    scopus 로고
    • Comparison of Enterococcus measurements in freshwater at two recreational beaches by quantitative polymerase chain reaction and membrane filter culture analysis
    • DOI 10.1016/j.watres.2004.11.011, PII S0043135404005342
    • Haugland, R. A.; Siefring, S. C.; Wymer, L. J.; Brenner, K. P.; Dufour, A. P. Comparison of Enterococcus measurements in freshwater at two recreational beaches by quantitative polymerase chain reaction and membrane filter culture analysis Water Res. 2005, 39 (4) 559-68 (Pubitemid 40221877)
    • (2005) Water Research , vol.39 , Issue.4 , pp. 559-568
    • Haugland, R.A.1    Siefring, S.C.2    Wymer, L.J.3    Brenner, K.P.4    Dufour, A.P.5
  • 8
    • 42149168057 scopus 로고    scopus 로고
    • Improved real-time PCR assays for the detection of fecal indicator bacteria in surface waters with different instrument and reagent systems
    • DOI 10.2166/wh.2008.022
    • Seifring, S. C.; Vama, M.; Atikovic, E.; Wymer, L. J.; Haugland, R. A. Improved real-time PCR assays for the detection of fecal indicator bacteria in surface waters with different instrument and reagent systems J. Water Health 2008, 6, 225-37 (Pubitemid 351772174)
    • (2008) Journal of Water and Health , vol.6 , Issue.2 , pp. 225-237
    • Siefring, S.1    Varma, M.2    Atikovic, E.3    Wymer, L.4    Haugland, R.A.5
  • 9
    • 33745131779 scopus 로고    scopus 로고
    • Development of goose- and duck-specific DNA markers to determine sources of Escherichia coli in waterways
    • Hamilton, M. J. Y.; Tao, S.; Michael, J. Development of goose- and duck-specific DNA markers to determine sources of Escherichia coli in waterways Appl. Environ. Microbiol. 2006, 72 (6) 4012-4019
    • (2006) Appl. Environ. Microbiol. , vol.72 , Issue.6 , pp. 4012-4019
    • Hamilton, M.J.Y.1    Tao, S.2    Michael, J.3
  • 11
    • 77954280652 scopus 로고    scopus 로고
    • Comparison of fecal indicator bacteria densities in marine recreational waters by QPCR
    • Chern, E.; Brenner, K.; Wymer, L.; Haugland, R. A. Comparison of fecal indicator bacteria densities in marine recreational waters by QPCR Water Quality Exposure and Health 2009, 1 (3) 203-214
    • (2009) Water Quality Exposure and Health , vol.1 , Issue.3 , pp. 203-214
    • Chern, E.1    Brenner, K.2    Wymer, L.3    Haugland, R.A.4
  • 13
    • 34548734825 scopus 로고    scopus 로고
    • Efficacy of Bacteroides measurements for reducing the statistical uncertainty associated with hydrologic flow and fecal loads in a mixed use watershed
    • DOI 10.2134/jeq2006.0496
    • Gentry, R. W.; Layton, A. C.; McKay, L.; McCarthy, J. F.; Williams, D. E.; Koirala, S. R.; Sayler, G. S. Efficacy of Bacteroides measurements for reducting the statistical uncertainty associated with hydrologic flow and fecal loads in a mixed use watershed J. Environ. Qual. 2007, 36, 1324-1330 (Pubitemid 47427617)
    • (2007) Journal of Environmental Quality , vol.36 , Issue.5 , pp. 1324-1330
    • Gentry, R.W.1    Layton, A.C.2    McKay, L.D.3    McCarthy, J.F.4    Williams, D.E.5    Koirala, S.R.6    Sayler, G.S.7
  • 15
    • 0343986617 scopus 로고
    • Ambient water quality criteria; Availability
    • USEPA, ()
    • USEPA Ambient water quality criteria; availability Fed. Regist. 1986, 51 (45) 8012-8016
    • (1986) Fed. Regist. , vol.51 , Issue.45 , pp. 8012-8016
  • 16
    • 33747359916 scopus 로고    scopus 로고
    • Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay, Oregon
    • Shanks, O. C.; Nietch, C.; Simonich, M.; Younger, M.; Reynolds, D.; Field, K. G. Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay, Oregon Appl. Environ. Microbiol. 2006, 72 (8) 5537-46
    • (2006) Appl. Environ. Microbiol. , vol.72 , Issue.8 , pp. 5537-46
    • Shanks, O.C.1    Nietch, C.2    Simonich, M.3    Younger, M.4    Reynolds, D.5    Field, K.G.6
  • 18
    • 0034488341 scopus 로고    scopus 로고
    • How quantitative is quantitative PCR with respect to cell counts?
    • Ludwig, W.; Schleifer, K. H. How quantitative is quantitative PCR with respect to cell counts? Syst. Appl. Microbiol. 2000, 23 (4) 556-62 (Pubitemid 32110947)
    • (2000) Systematic and Applied Microbiology , vol.23 , Issue.4 , pp. 556-562
    • Ludwig, W.1    Schleifer, K.-H.2
  • 20
    • 77956550816 scopus 로고    scopus 로고
    • Evaluation of genetic markers from the 16S rRNA gene V2 region for use in quantitative detection of selected Bacteroidales species and human fecal waste by qPCR
    • Haugland, R. A.; Varma, M.; Sivaganesan, M.; Kelty, C.; Peed, L.; Shanks, O. C. Evaluation of genetic markers from the 16S rRNA gene V2 region for use in quantitative detection of selected Bacteroidales species and human fecal waste by qPCR Syst. Appl. Microbiol. 2010, 33 (6) 348-57
    • (2010) Syst. Appl. Microbiol. , vol.33 , Issue.6 , pp. 348-57
    • Haugland, R.A.1    Varma, M.2    Sivaganesan, M.3    Kelty, C.4    Peed, L.5    Shanks, O.C.6
  • 21
    • 34247634968 scopus 로고    scopus 로고
    • Identification of bacterial DNA markers for the detection of human fecal pollution in water
    • DOI 10.1128/AEM.02474-06
    • Shanks, O. C.; Domingo, J. W.; Lu, J.; Kelty, C. A.; Graham, J. E. Identification of bacterial DNA markers for the detection of human fecal pollution in water Appl. Environ. Microbiol. 2007, 73 (8) 2416-22 (Pubitemid 46668732)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.8 , pp. 2416-2422
    • Shanks, O.C.1    Santo Domingo, J.W.2    Lu, J.3    Kelty, C.A.4    Graham, J.E.5
  • 22
    • 0034126848 scopus 로고    scopus 로고
    • Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes
    • Bernhard, A. E. F., K. G. Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes Appl. Environ. Microbiol. 2000, 66 (4) 1587-94
    • (2000) Appl. Environ. Microbiol. , vol.66 , Issue.4 , pp. 1587-94
    • Bernhard, A.E.F..K.G.1
  • 23
    • 0033774937 scopus 로고    scopus 로고
    • A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA
    • Bernhard, A. E. F., K. G. A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA Appl. Environ. Microbiol. 2000, 66 (10) 4571-4
    • (2000) Appl. Environ. Microbiol. , vol.66 , Issue.10 , pp. 4571-4
    • Bernhard, A.E.F..K.G.1
  • 24
    • 42149119481 scopus 로고    scopus 로고
    • A Bayesian method for calculating real-time quantitative PCR calibration curves using absolute plasmid DNA standards
    • Sivaganesan, M.; Seifring, S.; Varma, M.; Haugland, R. A.; Shanks, O. C. A Bayesian method for calculating real-time quantitative PCR calibration curves using absolute plasmid DNA standards BMC Bioinf. 2008, 9, 120
    • (2008) BMC Bioinf. , vol.9 , pp. 120
    • Sivaganesan, M.1    Seifring, S.2    Varma, M.3    Haugland, R.A.4    Shanks, O.C.5
  • 25
    • 77954756371 scopus 로고    scopus 로고
    • Quantitative real-time PCR assays for sensitive detection of Canada goose-specific fecal pollution in water sources
    • Fremaux, B.; Boa, T.; Yost, C. K. Quantitative real-time PCR assays for sensitive detection of Canada goose-specific fecal pollution in water sources Appl. Environ. Microbiol. 2010, 76 (14) 4886-4889
    • (2010) Appl. Environ. Microbiol. , vol.76 , Issue.14 , pp. 4886-4889
    • Fremaux, B.1    Boa, T.2    Yost, C.K.3
  • 26
    • 0028163832 scopus 로고
    • Sunlight inactivation of enterococci and fecal coliforms in sewage effluent diluted in seawater
    • Davies-Colley, R. J.; Bell, R. G.; Donnison, A. M. Sunlight inactivation of enterococci and fecal coliforms in sewage effluent diluted in seawater Appl. Environ. Microbiol. 1994, 60 (6) 2049-58 (Pubitemid 24165857)
    • (1994) Applied and Environmental Microbiology , vol.60 , Issue.6 , pp. 2049-2058
    • Davies-Colley, R.J.1    Bell, R.G.2    Donnison, A.M.3
  • 27
    • 0036199306 scopus 로고    scopus 로고
    • Sunlight inactivation of fecal indicator bacteria and bacteriophages from waste stabilization pond effluent in fresh and saline waters
    • DOI 10.1128/AEM.68.3.1122-1131.2002
    • Sinton, L. W.; Hall, C. H.; Lynch, P. A.; Davies-Colley, R. J. Sunlight inactivation of fecal indicator bacteria and bacteriophages from waste stabilization pond effluent in fresh and saline waters Appl. Environ. Microbiol. 2002, 68 (3) 1122-1131 (Pubitemid 34205349)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.3 , pp. 1122-1131
    • Sinton, L.W.1    Hall, C.H.2    Lynch, P.A.3    Davies-Colley, R.J.4
  • 28
    • 66649133470 scopus 로고    scopus 로고
    • Survival and persistence of human and ruminant-specific faecal Bacteroidales in freshwater microcosms
    • Walters, S. a. K. F. Survival and persistence of human and ruminant-specific faecal Bacteroidales in freshwater microcosms Environ. Microbiol. 2009, 11, 1410-1421
    • (2009) Environ. Microbiol. , vol.11 , pp. 1410-1421
    • Walters A. S, K.F.1
  • 31
    • 12744260019 scopus 로고    scopus 로고
    • Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater
    • Seurinck, S.; Defoirdt, T.; Verstraete, W.; Siciliano, S. D. Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater Environ. Microbiol. 2005, 7 (2) 249-59
    • (2005) Environ. Microbiol. , vol.7 , Issue.2 , pp. 249-59
    • Seurinck, S.1    Defoirdt, T.2    Verstraete, W.3    Siciliano, S.D.4
  • 32
    • 33847312252 scopus 로고    scopus 로고
    • Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater
    • Okabe, S.; Okayama, N.; Savichtcheva, O.; Ito, T. Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater Appl. Microbiol. Biotechnol. 2007, 74 (4) 890-901
    • (2007) Appl. Microbiol. Biotechnol. , vol.74 , Issue.4 , pp. 890-901
    • Okabe, S.1    Okayama, N.2    Savichtcheva, O.3    Ito, T.4


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