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Volumn 11, Issue 1, 2011, Pages 17-24

Intra-genomic 16S rRNA gene heterogeneity in cyanobacterial genomes

Author keywords

16S rRNA; Cyanobacteria; Genome; Intra genomic gene heterogeneity; Microheterogeneity

Indexed keywords


EID: 79959760433     PISSN: 18025439     EISSN: None     Source Type: Journal    
DOI: 10.5507/fot.2011.003     Document Type: Article
Times cited : (21)

References (18)
  • 1
    • 1942443733 scopus 로고    scopus 로고
    • Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons
    • Acinas, S.G., Marcelino, L.A., Klepac-Ceraj, V. & Polzm M. F. (2004): Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons.-J. Bacter. 186: 2629-2635.
    • (2004) J. Bacter. , vol.186 , pp. 2629-2635
    • Acinas, S.G.1    Marcelino, L.A.2    Klepac-Ceraj, V.3    Polzm, M.F.4
  • 4
    • 0242552653 scopus 로고    scopus 로고
    • Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced bacterial genomes
    • Coenye, T. & Vandamme, P. (2003): Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced bacterial genomes.-FEMS Microbiol. Lett. 228: 45-49.
    • (2003) FEMS Microbiol. Lett. , vol.228 , pp. 45-49
    • Coenye, T.1    Vandamme, P.2
  • 5
    • 0028343610 scopus 로고
    • Rates of transition and transversion in coding sequences since the human-rodent divergence
    • Collins, D. W. & Jukes, T.H.(1994): Rates of transition and transversion in coding sequences since the human-rodent divergence.-Genomics 20: 386-96.
    • (1994) Genomics , vol.20 , pp. 386-396
    • Collins, D.W.1    Jukes, T.H.2
  • 6
    • 77954351551 scopus 로고    scopus 로고
    • 16S rRNA gene heterogeneity in the filamentous marine cyanobacterial genus Lyngbya
    • Engene, N., Coates, R.C. & Gerwick, W.H. (2010): 16S rRNA gene heterogeneity in the filamentous marine cyanobacterial genus Lyngbya.-J. Phycol. 46: 591-601.
    • (2010) J. Phycol. , vol.46 , pp. 591-601
    • Engene, N.1    Coates, R.C.2    Gerwick, W.H.3
  • 7
    • 0029382234 scopus 로고
    • G.U base pairing motifs in ribosomal RNA
    • Gautheret, D., Konings, D. & Gutell, R.R.(1995): G.U base pairing motifs in ribosomal RNA.-RNA 1: 807-814.
    • (1995) RNA , vol.1 , pp. 807-814
    • Gautheret, D.1    Konings, D.2    Gutell, R.R.3
  • 8
    • 33845598296 scopus 로고    scopus 로고
    • System of cyanoprokaryotes (cyanobacteria)-state in 2004
    • Hoffman, L., Komárek, J. & Kaštovský, J.(2005): System of cyanoprokaryotes (cyanobacteria)-state in 2004.-Algological Studies 117: 95-115.
    • (2005) Algological Studies , vol.117 , pp. 95-115
    • Hoffman, L.1    Komárek, J.2    Kaštovský, J.3
  • 9
    • 0034074410 scopus 로고    scopus 로고
    • rRNA Operon Copy Number Reflects Ecological Strategies of Bacteria
    • Klappenbach, J.A., Dunbar, J.M. & Schmidt, T.M.(2000): rRNA Operon Copy Number Reflects Ecological Strategies of Bacteria.-Appl. Env. Mic. Biol. 66: 1328-1333.
    • (2000) Appl. Env. Mic. Biol. , vol.66 , pp. 1328-1333
    • Klappenbach, J.A.1    Dunbar, J.M.2    Schmidt, T.M.3
  • 10
    • 0034701188 scopus 로고    scopus 로고
    • Least-inclusive taxonomic unit: A new taxonomic concept for biology
    • Pleijel, F. & Rouse, G. W.(2000): Least-inclusive taxonomic unit: a new taxonomic concept for biology.-Proc. R. Soc. Lond. 267: 627-630.
    • (2000) Proc. R. Soc. Lond. , vol.267 , pp. 627-630
    • Pleijel, F.1    Rouse, G.W.2
  • 11
    • 0037043731 scopus 로고    scopus 로고
    • Cultivation of the ubiquitous SAR11 marine bacterioplankton clade
    • Rappe, M.S., Connon, S.A., Vergin, K.L. & Giovannoni, S.J.(2002): Cultivation of the ubiquitous SAR11 marine bacterioplankton clade.-Nature 418: 630-633.
    • (2002) Nature , vol.418 , pp. 630-633
    • Rappe, M.S.1    Connon, S.A.2    Vergin, K.L.3    Giovannoni, S.J.4
  • 12
    • 70449723278 scopus 로고    scopus 로고
    • Visualization of ribosomal RNA operon copy number distribution
    • Rastogi, R., Wu, M., DasGupta, I. & Fox, G.E.(2009): Visualization of ribosomal RNA operon copy number distribution.-BMC Microbiol. 25: 208.
    • (2009) BMC Microbiol. , vol.25 , pp. 208
    • Rastogi, R.1    Wu, M.2    Dasgupta, I.3    Fox, G.E.4
  • 13
    • 35448936492 scopus 로고    scopus 로고
    • Molecular fingerprint of bacterial communities and 16S rDNA intra-species heterogeneity: A pitfall that should be considered
    • Roudière, L., Lorto, S., Tallagrand, E., Marchandin, H., Jeannot, J.-L. & Jumas-Bilak, E.(2007): Molecular fingerprint of bacterial communities and 16S rDNA intra-species heterogeneity: a pitfall that should be considered.-Pathologie Biologie 55: 434-440.
    • (2007) Pathologie Biologie , vol.55 , pp. 434-440
    • Roudière, L.1    Lorto, S.2    Tallagrand, E.3    Marchandin, H.4    Jeannot, J.-L.5    Jumas-Bilak, E.6
  • 15
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994): CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.-Nucleic Acids Res. 22: 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 16
    • 0029789623 scopus 로고    scopus 로고
    • The European database on small subunit ribosomal RNA
    • Van de Peer, Y., Chapelle, S. & De Wachter, R.(1996): The European database on small subunit ribosomal RNA.-Nucleic Acids Res. 24: 3381-3391.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3381-3391
    • van de Peer, Y.1    Chapelle, S.2    de Wachter, R.3
  • 18
    • 0025300402 scopus 로고
    • Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
    • Woese, C.R., Kandler, O. & Whelis, M.L.(1990): Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya.-Proc. Nati. Acad. Sci. USA. 87: 4576-4579.
    • (1990) Proc. Nati. Acad. Sci. USA. , vol.87 , pp. 4576-4579
    • Woese, C.R.1    Kandler, O.2    Whelis, M.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.