Combining size-exclusion chromatography and fully automated chip-based nanoelectrospray quadrupole time-of-flight tandem mass spectrometry for structural analysis of chondroitin/dermatan sulfate in human decorin

Electrophoresis

Volumn 32, Issue 13, 2011, Pages 1639-1646

  Zamfir, Alina D ^a,b   Flangea, Corina ^a,b   Sisu, Eugen ^c,d   Seidler, Daniela G ^e   Peter Katalinić, Jasna ^e  

^a AUREL VLAICU UNIVERSITY OF ARAD   (Romania)

^b WEST UNIVERSITY OF TIMISOARA   (Romania)

^c VICTOR BABES UNIVERSITY OF MEDICINE AND PHARMACY   (Romania)

^d ACADEMY OF ROMANIAN SCIENTISTS   (Romania)

^e UNIVERSITY OF MÜNSTER   (Germany)

Author keywords

Automatization; Chip electrospray mass spectrometry; Chondroitin sulfate; Decorin; Dermatan sulfate; SEC

Indexed keywords

CELL CULTURE; CHAINS; ENZYMATIC HYDROLYSIS; FIBROBLASTS; MASS SPECTROMETRY; SULFUR COMPOUNDS;

AUTOMATIZATION; CHIP ELECTROSPRAY MASS SPECTROMETRY; CHONDROITIN; CHONDROITINSULFATE; DECORIN; DERMATAN SULPHATE; ELECTROSPRAY MASS SPECTROMETRY; FULLY AUTOMATED; OCTASACCHARIDE; SIZE-EXCLUSION CHROMATOGRAPHY;

SIZE EXCLUSION CHROMATOGRAPHY;

CHONDROITIN SULFATE; DECORIN; DERMATAN SULFATE; GLYCOSAMINOGLYCAN; HEXURONIC ACID; IDURONIC ACID;

ARTICLE; AUTOMATION; CHEMICAL COMPOSITION; CHROMATIN IMMUNOPRECIPITATION; COLLISIONALLY ACTIVATED DISSOCIATION; DEPOLYMERIZATION; ELECTROSPRAY MASS SPECTROMETRY; ELIMINATION REACTION; FLOW RATE; FRACTIONATION; GEL PERMEATION CHROMATOGRAPHY; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HUMAN; HYDROLYSIS; MASS SPECTROMETRY; PROTEIN ANALYSIS; QUADRUPOLE MASS SPECTROMETRY; SEPARATION TECHNIQUE; SKIN FIBROBLAST; STRUCTURE ANALYSIS;

EID: 79959738750     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.201100094     Document Type: Article

References (45)

1. Iozzo, R. V., Schaefer, L., FEBS J. 2010, 277, 3864-3875.
2. Manon-Jensen, T., Itoh, Y., Couchman, J. R., FEBS. J. 2010, 277, 3876-3889.
3. Barash, U., Cohen-Kaplan, V., Dowek, I., Sanderson, R. D., Ilan, N., Vlodavsky, I., FEBS J. 2010, 277, 3890-3903.
4. Hadler-Olsen, E., Fadnes, B., Sylte, I., Uhlin-Hansen, L., Winberg, J. O., FEBS J. 2011, 278, 28-45.
5. Theocharis, A. D., Skandalis, S. S., Tzanakakis, G. N., Karamanos, N. K., FEBS J. 2010, 277, 3904-3923.
6. Kresse, H., Schönherr, E., J. Cell Physiol. 2001, 189, 266-274.
7. Kresse, H., Liszio, C., Schönherr, E., Fisher, L. W., J. Biol. Chem. 1997, 272, 18404-18410.
8. Iozzo, R. V., Annu. Rev. Biochem. 1998, 67, 609-652.
9. Schönherr, E., Sunderkötter, C., Iozzo, R. V., Schaefer, L., J. Biol. Chem. 2005, 280, 15767-15772.
10. Turnbull, J. E., Fernig, D. G., Ke, Y., Wilkinson, M. C., Gallager, J. T., J. Biol. Chem. 1992, 267, 10337-10341.
11. Zamfir, A., Seidler, D. G., Kresse, H., Peter-Katalinic, J., Glycobiology 2003, 13, 733-742.
12. Lyon, M., Deakin, J. A., Rahmoune, H., Fernig, D. G., Nakamura, T., Gallagher, J. T., J. Biol. Chem. 1998, 273, 271-278.
13. Maimone, M. M., Tollefsen, D. M., J. Biol. Chem. 1990, 265, 18263-18271.
14. Mascellani, G., Liverani, L., Bianchini, P., Parma, B., Torri, G., Bisio, A., Guerrini, M., Casu, B., Biochem. J. 1993, 296, 639-648.
15. Cella, G., Boeri, G., Saggiorato, G., Paolini, R., Luzzatto, G., Terribile, V. I., Angiology 1992, 43, 59-62.
16. Walker, A., Gallagher, J. T., Biochem. J. 1996, 317, 871-877.
17. Zamfir, A. D., Seidler, D., Schonherr, E., Kresse, H., Peter-Katalinić, J., Electrophoresis 2004, 25, 2010-2016.
18. Zamfir, A. D., Flangea, C., Sisu, E., Serb, A. F., Dinca, N., Bruckner, P., Seidler, D. G., Proteomics 2009, 9, 3435-3444.
19. Zaia, J., Mass Spectrom. Rev. 2004, 23, 161-227.
20. Zamfir, A. D., Peter-Katalinić, J., Electrophoresis 2004, 25, 1949-1963.
21. Zaia, J., Mass Spectrom. Rev. 2009, 28, 254-272.
22. Zaia, J., OMICS 2010, 14, 401-418.
23. Amon, S., Zamfir, A. D., Rizzi, A., Electrophoresis 2008, 29, 2485-2507.
24. Bielik, A. M., Zaia, J., Methods Mol. Biol. 2010, 600, 215-225.
25. Flangea, C., Serb, A. F., Schiopu, C., Tudor, S., Sisu, E., Seidler, D. G., Zamfir, A. D., Cent. Eur. J. Chem. 2009, 7, 752-759.
26. Flangea, C., Schiopu, C., Sisu, E., Serb, A., Przybylski, M., Seidler, D. G., Zamfir, A. D., Anal. Bioanal. Chem. 2009, 395, 2489-2498.
27. Sisu, E., Flangea, C., Serb, A., Zamfir, A. D., Amino Acids 2011, DOI: 10.1007/s00726-010-0682-4, in press.
28. Zaia, J., Costello, C. E., Anal. Chem. 2001, 73, 233-239.
29. Volpi, N., Maccari, F., Linhardt, R. J., Electrophoresis 2008, 29, 3095-3106.
30. Zamfir, A. D., Seidler, D., Kresse, H., Peter-Katalinic, J., Rapid Commun. Mass Spectrom. 2002, 16, 2015-2024.
31. Hitchcock, A. M., Costello, C. E., Zaia, J., Biochemistry 2006, 45, 2350-2361.
32. Volpi, N., Maccari, F., Glycobiology 2009, 19, 356-367.
33. Laremore, T. N., Ly, M., Zhang, Z., Solakyildirim, K., Mccallum, S. A., Owens, R. T., Linhardt, R. J., Biochem. J. 2010, 431, 199-205.
34. Ambrosius, M., Kleesiek, K., Götting, C., J. Chromatogr. A 2008, 1201, 54-60.
35. Volpi, N., Anal. Biochem. 2010, 397, 12-23.
36. Miller, M. J. C., Costello, C. E., Malmström, A., Zaia, J., Glycobiology 2006, 16, 502-513.
37. Zaia, J., Li, X. Q., Chan, S. Y., Costello, C. E., J. Am. Soc. Mass Spectrom. 2003, 14, 1270-1281.
38. Wolff, J. J., Chi, L., Linhardt, R. J., Amster, I. J., J. Am. Soc. Mass Spectrom. 2007, 18, 234-244.
39. Wolff, J. J., Laremore, T. N., Busch, A. M., Linhardt, R. J., Amster, I. J., J. Am. Soc. Mass Spectrom. 2008, 19, 294-304.
40. Hausser, H., Hoppe, W., Rauch, U., Kresse, H., Biochem. J. 1989, 263, 137-142.
41. Seidler, D. G., Breuer, E., Grande-Allen, K. J., Hascall, V. C., Kresse, H., J. Biol. Chem. 2002, 277, 42409-42416.
42. Domon, B., Costello, C. E., Glycoconjug. J. 1988, 5, 397-409.
43. Gu, K., Linhardt, R. J., Laliberte, M., Gu, K., Zimmermann, J., Biochem. J. 1995, 312, 569-577.
44. Gacesa, P., FEBS Lett. 1987, 212, 199-202.
45. Bao, X., Pavao, M. S., Dos Santos, J. C., Sugahara, K., J. Biol. Chem. 2005, 280, 23184-23193.