Effect of fertilization on paddy soil bacterial diversity and spatial distribution

Fresenius Environmental Bulletin

Volumn 20, Issue 6 A, 2011, Pages 1558-1563

  Zhang, Hanlin ^a,b   Lu, Yitong ^b   Cao, Linkui ^b  

^a SHANGHAI JIAO TONG UNIVERSITY   (China)

^b AGRO ENVIRONMENTAL PROTECTION INSTITUTE   (China)

Author keywords

Bacterial diversity; Fertilization; Paddy soil; PCR DGGE; Spatial distribution

Indexed keywords

BACTERIUM; CORRELATION; FERTILIZER APPLICATION; LYSIMETER; MICROBIAL COMMUNITY; PADDY FIELD; POLYMERASE CHAIN REACTION; SOIL DEPTH; SOIL MICROORGANISM; SPATIAL DISTRIBUTION; UREA;

BACTERIA (MICROORGANISMS); BURKHOLDERIA CENOCEPACIA; ENTEROCOCCUS FAECALIS; ESCHERICHIA; PSEUDOMONAS; STREPTOMYCES; STREPTOMYCES GHANAENSIS;

EID: 79959584064     PISSN: 10184619     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (20)

1. Shi J P, Zhang F D and Lin B. (2002). Effects of long-term located fertilization on the physico-chemical property of soil humus. Scientia Agricultura Sinica, 35(2): 174-180.
2. Wei Y M, Zhu L X, and Qiao Y J. (2003). The agricultural fertilization and its impact on the environment in the arid area. Journal of Arid Land Resources and Environment, 17(5): 65-69.
3. Cao Z H. (2003). Effect of fertilization on water qualityEffect of fertilization on environment quality. Soils, 35(5): 353-363.
4. Kennedy A C and Smith K L. (1995). Soil Microbial Diversity and the Sustainability of Agriculture Soils. Plant Soil, 170(1): 75-86. (Pubitemid 26448994)
5. Zhang C E and Chen X I. (1998). Influence of Reclamation of Forest Land On Nutrients and Enzyme Activities in Soil. Chinese Journal of Ecology, 17(6): 18-21.
6. Xu Q. (2001). Evolution of soil fertility in relation to its quality in paddy field of the Taihu lake area. Resources and Environment in the Yangtze Basin, 10(4): 323-328.
7. Tilman, D., Wedin, D. and Knops, J. (1996). Productivity and sustainability influenced by biodiversity in grassland ecosystems. Nature, 379: 718-720.
8. van der Heijden, M.G.A., Klironomos, J.N., Ursic, M., Moutoglis, P., Streitwolf-Engel, R., Boiler, T., Wiemken, A. and Sanders, LR. (1998). Mycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivity. Nature, 396: 69-72. (Pubitemid 28520449)
9. Ananyeva N D, Demkina T S, Jones W J, Cabrera, M.L. and Steen, W.C. (1999). Microbial biomass in soils of Russia under long-term management practices. Biol Fertil Soils, 29: 291-299. (Pubitemid 29358159)
10. Sneh G, Chander K, Mundra MC and Kapoor KK (1999). Influence of inorganic fertilizers and organic amendments on soil organic matter and soil microbial properties under tropical conditions. Biol Fértil Soils, 29:196-200. (Pubitemid 29235521)
11. Simek M, Hopkins DW, Kalcik J, Picek T, Santruckova H, Stana J and Travnik K (1999). Biological and chemical properties of arable soils affected by long-term organic and inorganic fertilizer applications. Biol Fertil Soils, 29: 300-308. (Pubitemid 29358160)
12. Zhao Q G. (2002). Environmental quality and agricultural security of Jiangsu Province. Soils, 1:1-8.
13. Mäder, P., Fliessbach, A., Dubois, D., Gunst, L., Fried, P. and Niggli, U. (2002). Soil fertility and biodiversity in organic farming. Science, 293: 1694-1697. (Pubitemid 34579169)
14. Gong M L, Ren N Q and Xing D F. (2004). Application of denaturing gradient gel electrophoresis and temperature gradient gel electrophoresis in microbial molecular ecology (In Chinese). Acta Microbiologica Sinica, 4 (6): 845-848.
15. Ferris M.J and Ward D.M. (1997). Seasonal distributions of dominant 16S rRNA-defined populations in a hot spring microbial mat examined by denaturing gradient gel electrophoresis. Applied and Environmental Microbiology, 63: 1375-1381.
16. Zhou, J., Bruns, M.A. and Tiedje, J.M. (1996). DNA recovery from soils of diverse composition. Applied and Environmental Microbiology, 62: 316-322. (Pubitemid 26047397)
17. Muyzer G, De Waal, E.C and Uitterlinden A.G. (1993). Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reactionamplified genes coding for 16S rRNA. Applied and Environmental Microbiology 59,695-700. (Pubitemid 23072343)
18. Sheffield V C, Cox D R, Lerman L S and Myers, R.M. (1989). Attachment of a 40-base-pair G+C-rich sequence (GC-clamp) to genomic DNA fragments by the polymerase chain reaction results in improved detection of single-base changes. Proceedings of the National Academy of Sciences USA 86,232-236. (Pubitemid 19036361)
19. van Hannen, E.J., Zwart, G., van Agterveld, M.P., Gons, H.J., Ebert, J. and Laanbroek, H.J. (1999). Changes in Bacterial and Ewukaryotic community structure after mass lysis of filamentous cyanobacteria associated with virus. Appl. Environ. Microbial, 65: 795-801. (Pubitemid 29075133)
20. Altschul, S. F., Gish, W., Miller, W., Myers, E. W. and Lipman, D. J. (1990). Basic local alignment search tool. Journal of Molecular Biology, 215,403-410.