-
1
-
-
53849139154
-
Wagner and Dollo: A stochastic duet by composing two parsimonious solos
-
Alekseyenko A.V., Lee C.J., Suchard M.A. 2008. Wagner and Dollo: a stochastic duet by composing two parsimonious solos. Syst. Biol. 57:772-784.
-
(2008)
Syst. Biol
, vol.57
, pp. 772-784
-
-
Alekseyenko, A.V.1
Lee, C.J.2
Suchard, M.A.3
-
2
-
-
44349133224
-
A stem batrachian from the Early Permian of Texas and the origin of frogs and salamanders
-
DOI 10.1038/nature06865, PII NATURE06865
-
Anderson J.S., Reisz R.R., Scott D., Fröbisch N.B., Sumida S.S. 2008. A stem batrachian from the Early Permian of Texas and the origin of frogs and salamanders. Nature. 453:515-518. (Pubitemid 351733311)
-
(2008)
Nature
, vol.453
, Issue.7194
, pp. 515-518
-
-
Anderson, J.S.1
Reisz, R.R.2
Scott, D.3
Frobisch, N.B.4
Sumida, S.S.5
-
4
-
-
0038518200
-
Dating the tree of life
-
DOI 10.1126/science.1077795
-
Benton MJ., Ayala FJ. 2003. Dating the tree of life. Science. 300: 1698-1700. (Pubitemid 36712555)
-
(2003)
Science
, vol.300
, Issue.5626
, pp. 1698-1700
-
-
Benton, M.J.1
Ayala, F.J.2
-
5
-
-
33751167085
-
Phylogeny and biogeography of a cosmopolitan frog radiation: Late Cretaceous diversifcation resulted in continent-scale endemism in the family Ranidae
-
Bossuyt F., Brown R.M., Hillis D.M., Cannatella D.C., Milinkovitch M.C. 2006. Phylogeny and biogeography of a cosmopolitan frog radiation: Late Cretaceous diversifcation resulted in continent-scale endemism in the family Ranidae. Syst. Biol. 55:579-594.
-
(2006)
Syst. Biol
, vol.55
, pp. 579-594
-
-
Bossuyt, F.1
Brown, R.M.2
Hillis, D.M.3
Cannatella, D.C.4
Milinkovitch, M.C.5
-
6
-
-
54549125844
-
The taming of the skew: Estimating proper confdence intervals for divergence dates
-
Burbrink F.T., Pyron R.A. 2008. The taming of the skew: estimating proper confdence intervals for divergence dates. Syst. Biol. 57: 317-328.
-
(2008)
Syst. Biol
, vol.57
, pp. 317-328
-
-
Burbrink, F.T.1
Pyron, R.A.2
-
7
-
-
0000909794
-
Amphibian relationships: Phylogenetic analysis of morphology and molecules
-
Cannatella D.C., Hillis D.M. 1993. Amphibian relationships: Phylogenetic analysis of morphology and molecules. Herpetol. Monogr. 7:1-7.
-
(1993)
Herpetol. Monogr
, vol.7
, pp. 1-7
-
-
Cannatella, D.C.1
Hillis, D.M.2
-
8
-
-
54549123562
-
Mosaicism, modules, and the Evolution of birds: Results from a Bayesian approach to the study of morphological evolution using discrete character data
-
Clarke J.A., Middleton K. 2008. Mosaicism, modules, and the Evolution of birds: results from a Bayesian approach to the study of morphological evolution using discrete character data. Syst. Biol. 57:185-201.
-
(2008)
Syst. Biol
, vol.57
, pp. 185-201
-
-
Clarke, J.A.1
Middleton, K.2
-
9
-
-
0000139093
-
Sarcopterygian interrelationships: How far are we from a phylogenetic consensus?
-
Cloutier R., Ahlberg PE. 1995. Sarcopterygian interrelationships: how far are we from a phylogenetic consensus? Géobios. 19:241-248.
-
(1995)
Géobios
, vol.19
, pp. 241-248
-
-
Cloutier, R.1
Ahlberg, P.E.2
-
10
-
-
38449097095
-
Fossils impact as hard as living taxa in parsimony analyses of morphology
-
Cobbett A., Wilkinson M., Wills M.A. 2007. Fossils impact as hard as living taxa in parsimony analyses of morphology Syst. Biol. 56:753-766.
-
(2007)
Syst Biol
, vol.56
, pp. 753-766
-
-
Cobbett, A.1
Wilkinson, M.2
Wills, M.A.3
-
11
-
-
33644596810
-
Optimal intron analyses in the Trimeresurus radiation of Asian pitvipers
-
Creer S., Pook C.E., Malhotra A., Thorpe R.S. 2006. Optimal intron analyses in the Trimeresurus radiation of Asian pitvipers. Syst. Biol. 55:57-72.
-
(2006)
Syst. Biol
, vol.55
, pp. 57-72
-
-
Creer, S.1
Pook, C.E.2
Malhotra, A.3
Thorpe, R.S.4
-
12
-
-
0024894394
-
The importance of fossils in phylogeny reconstruction
-
Donoghue M., Doyle J., Gauthier J., Kluge A., Rowe T. 1989. The importance of fossils in phylogeny reconstruction. Annu. Rev. Ecol. Evol. Syst. 20:431-460.
-
(1989)
Annu. Rev. Ecol. Evol. Syst
, vol.20
, pp. 431-460
-
-
Donoghue, M.1
Doyle, J.2
Gauthier, J.3
Kluge, A.4
Rowe, T.5
-
13
-
-
34447333669
-
Rocks and clocks: Calibrating the Tree of Life using fossils and molecules
-
DOI 10.1016/j.tree.2007.05.005, PII S0169534707001553
-
Donoghue PC.J., Benton M.J. 2007. Rocks and clocks: calibrating the tree of life using fossils and molecules. Trends Ecol. Evol. 22: 424-431. (Pubitemid 47058779)
-
(2007)
Trends in Ecology and Evolution
, vol.22
, Issue.8
, pp. 424-431
-
-
Donoghue, P.C.J.1
Benton, M.J.2
-
15
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond A.J., Rambaut A. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7:214.
-
(2007)
BMC Evol. Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
16
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
DOI 10.1093/nar/gkh340
-
Edgar R.C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797. (Pubitemid 38832724)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.5
, pp. 1792-1797
-
-
Edgar, R.C.1
-
17
-
-
0027501821
-
Taxonomic congruence versus total evidence, and amniote phylogeny inferred from fossils, molecules, and morphology
-
Eernisse DJ., Kluge A.G. 1993. Taxonomic congruence versus total evidence, and the phylogeny of amniotes inferred from fossils, molecules and morphology Mol. Biol. Evol. 10:1170-1195. (Pubitemid 23352604)
-
(1993)
Molecular Biology and Evolution
, vol.10
, Issue.6
, pp. 1170-1195
-
-
Eernisse, D.J.1
Kluge, A.G.2
-
18
-
-
79959478155
-
Encyclopedia of palaeoherpetology, part 2
-
München (Germany): Dr Friedrich Pfeil
-
Estes R. 1981. Encyclopedia of palaeoherpetology, part 2. Gymnophiona. München (Germany): Dr Friedrich Pfeil.
-
(1981)
Gymnophiona
-
-
Estes, R.1
-
20
-
-
0032087259
-
Molecular evidence for the early history of living amphibians
-
DOI 10.1006/mpev.1998.0500, PII S1055790398905000
-
Feller A.E., Hedges S.B. 1998. Molecular evidence for the early history ofliving amphibians. Mol. Phylogenet. Evol. 9:509-516. (Pubitemid 128351485)
-
(1998)
Molecular Phylogenetics and Evolution
, vol.9
, Issue.3
, pp. 509-516
-
-
Feller, A.E.1
Hedges, S.B.2
-
21
-
-
0038785934
-
Combined support for wholesale taxic atavism in gavialine crocodylians
-
DOI 10.1080/10635150309329
-
Gatesy J., Amato G., Norell M., DeSalle R., Hayashi C. 2003. Combined support for wholesale taxic atavism in gavialine crocodylians. Syst. Biol. 52:403-422. (Pubitemid 36844328)
-
(2003)
Systematic Biology
, vol.52
, Issue.3
, pp. 403-422
-
-
Gatesy, J.1
Amato, G.2
Norell, M.3
DeSalle, R.4
Hayashi, C.5
-
22
-
-
0024258114
-
Amniote phylogeny and the importance of fossils
-
Gauthier J., Kluge A.G., Rowe T. 1988. Amniote phylogeny and the importance of fossils. Cladistics. 4:105-209. (Pubitemid 19310711)
-
(1988)
Cladistics
, vol.4
, Issue.2
, pp. 105-209
-
-
Gauthier, J.1
Kluge, A.G.2
Rowe, T.3
-
24
-
-
2442719922
-
-
Cambridge (MA): Cambridge University Press
-
Gradstein FM., Ogg J.G., Smith A.G., Agterberg FP, Bleeker W, et al. 2004. A geologic time scale. Cambridge (MA): Cambridge University Press.
-
(2004)
A Geologic Time Scale
-
-
Gradstein, F.M.1
Ogg, J.G.2
Smith, A.G.3
Agterberg, F.P.4
Bleeker, W.5
-
25
-
-
1642554676
-
Reading the entrails of chickens: Molecular timescales of evolution and the illusion of precision
-
DOI 10.1016/j.tig.2003.12.003
-
Graur D., Martin W 2004. Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision. Trends Genet. 20:80-86. (Pubitemid 38121359)
-
(2004)
Trends in Genetics
, vol.20
, Issue.2
, pp. 80-86
-
-
Graur, D.1
Martin, W.2
-
27
-
-
70350103638
-
Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times
-
Ho S.Y.W., Phillips MJ. 2009. Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times. Syst. Biol. 58:367-380.
-
(2009)
Syst. Biol
, vol.58
, pp. 367-380
-
-
Ho, S.Y.W.1
Phillips, M.J.2
-
30
-
-
84960586331
-
When are fossils better than extant taxa in phylogenetic analysis?
-
Huelsenbeck J.P 1991. When are fossils better than extant taxa in phylogenetic analysis? Syst. Zool. 40:458-469.
-
(1991)
Syst Zool
, vol.40
, pp. 458-469
-
-
Huelsenbeck, J.P.1
-
31
-
-
34547762740
-
The impact of fossils and taxon sampling on ancient molecular dating analyses
-
DOI 10.1093/molbev/msm115
-
Hug L.A., Roger A.J. 2007. The impact of fossils and taxon sampling on ancient molecular dating analyses. Mol. Biol. Evol. 24:1889-1897. (Pubitemid 47236710)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.8
, pp. 1889-1897
-
-
Hug, L.A.1
Roger, A.J.2
-
32
-
-
34547465760
-
Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1
-
DOI 10.1080/10635150701477825, PII 780704360
-
Hugall A.F., Foster R., Lee M.S.Y. 2007. Calibration choice, rate smoothing, and the pattern of tetrapod diversifcation according to the long nuclear gene RAG-1. Syst. Biol. 56:543-563. (Pubitemid 47171630)
-
(2007)
Systematic Biology
, vol.56
, Issue.4
, pp. 543-563
-
-
Hugall, A.F.1
Foster, R.2
Lee, M.S.Y.3
-
33
-
-
72049121650
-
The impact of the representation of fossil calibration on Bayesian estimation of species divergence times
-
Inoue J.G., Donoghue PCJ., Yang Z. 2010. The impact of the representation of fossil calibration on Bayesian estimation of species divergence times. Syst. Biol. 59:74-89.
-
(2010)
Syst. Biol
, vol.59
, pp. 74-89
-
-
Inoue, J.G.1
Donoghue, P.C.J.2
Yang, Z.3
-
34
-
-
0032580152
-
A molecular timescale for vertebrate evolution
-
DOI 10.1038/31927
-
Kumar S., Hedges S.B. 1998. A molecular timescale for vertebrate Evolution. Nature. 392:917-920. (Pubitemid 28232061)
-
(1998)
Nature
, vol.392
, Issue.6679
, pp. 917-920
-
-
Kumar, S.1
Hedges, S.B.2
-
35
-
-
0002390034
-
The importance of global parsimony and historical bias in understanding tetrapod evolution. Part I. Systematics, middle ear evolution and jaw suspension
-
DOI 10.1016/S0003-4339(98)80132-9
-
Laurin M. 1998. The importance of global parsimony and historical bias in understanding tetrapod evolution. Part I. Systematics, middle ear evolution, andjaw suspension. Ann. Sci. Nat., Zool., 13 Ser. 19:1-42. (Pubitemid 128096401)
-
(1998)
Annales des sciences naturelles. Zoologie et biologie animale
, vol.19
, Issue.1
, pp. 1-42
-
-
Laurin, M.1
-
36
-
-
4644237660
-
The evolution of body size, cope's rule and the origin of amniotes
-
DOI 10.1080/10635150490445706
-
Laurin M. 2004. The evolution ofbody size, Cope's rule and the origin of amniotes. Syst. Biol. 53:594-622. (Pubitemid 39290202)
-
(2004)
Systematic Biology
, vol.53
, Issue.4
, pp. 594-622
-
-
Laurin, M.1
-
37
-
-
0002193723
-
A new perspective on tetrapod phylogeny
-
In: Sumida S., Martin K., editors London: Academic Press
-
Laurin M., Reisz R.R. 1997. A new perspective on tetrapod phylogeny In: Sumida S., Martin K., editors. Amniotes origins: completing the transition to land. London: Academic Press.
-
(1997)
Amniotes Origins: Completing the Transition to Land
-
-
Laurin, M.1
Reisz, R.R.2
-
38
-
-
33745861376
-
Molecular clocks and the origin(s) of modern amphibians
-
DOI 10.1016/j.ympev.2006.03.013, PII S1055790306000923
-
Lee M.S.Y, Anderson J.S. 2006. Molecular clocks and the origin(s) of modern amphibians. Mol. Phylogenet. Evol. 40:635-639. (Pubitemid 44038585)
-
(2006)
Molecular Phylogenetics and Evolution
, vol.40
, Issue.2
, pp. 635-639
-
-
Lee, M.S.Y.1
Anderson, J.S.2
-
39
-
-
60349127526
-
Phylogenetic uncertainty and molecular clock calibrations in legless lizards (Pygopodidae, Gekkota)
-
Lee M.S.Y, Oliver P, Hutchinson M.N. 2009. Phylogenetic uncertainty and molecular clock calibrations in legless lizards (Pygopodidae, Gekkota). Mol. Phylogenet. Evol. 50:661-666.
-
(2009)
Mol. Phylogenet. Evol
, vol.50
, pp. 661-666
-
-
Lee, M.S.Y.1
Oliver, P.2
Hutchinson, M.N.3
-
40
-
-
67449163699
-
The effect of missing data on phylogenetic estimates obtained by maximum-likelihood and Bayesian inference
-
Lemmon A.R., Brown J.M., Stanger-Hall K., Lemmon E.M. 2009. The effect of missing data on phylogenetic estimates obtained by maximum-likelihood and Bayesian inference. Syst. Biol. 58: 130-145.
-
(2009)
Syst. Biol
, vol.58
, pp. 130-145
-
-
Lemmon, A.R.1
Brown, J.M.2
Stanger-Hall, K.3
Lemmon, E.M.4
-
41
-
-
0035527396
-
A likelihood approach to estimating phylogeny from discrete morphological character data
-
Lewis PO. 2001. A likelihood approach to estimating phylogeny from discrete morphological character data. Syst. Biol. 50:913-925.
-
(2001)
Syst. Biol
, vol.50
, pp. 913-925
-
-
Lewis, P.O.1
-
42
-
-
77953773178
-
Using fossils to break long branches in molecular dating: A comparison of relaxed clocks applied to the origin of angiosperms
-
Magallón S. 2010. Using fossils to break long branches in molecular dating: a comparison of relaxed clocks applied to the origin of angiosperms. Syst. Biol. 59:384-399.
-
(2010)
Syst. Biol
, vol.59
, pp. 384-399
-
-
Magallón, S.1
-
43
-
-
34548561977
-
Phylogeny of extant and extinct Jug-landaceae inferred from the integration of molecular and morphological data sets
-
Manos PS., Soltis PS., Soltis D.E., Manchester S.R., Oh S.-H., Bell C.D., Dilcher D.L., Stone D.E. 2007. Phylogeny of extant and extinct Jug-landaceae inferred from the integration of molecular and morphological data sets. Syst. Biol. 56:412-430.
-
(2007)
Syst. Biol
, vol.56
, pp. 412-430
-
-
Manos, P.S.1
Soltis, P.S.2
Soltis, D.E.3
Manchester, S.R.4
Oh, S.-H.5
Bell, C.D.6
Dilcher, D.L.7
Stone, D.E.8
-
44
-
-
34249739745
-
Fossils, molecules, divergence times, and the origin of lissamphibians
-
DOI 10.1080/10635150701397635, PII 778976765
-
Marjanović D., Laurin M. 2007. Fossils, molecules, divergence times, and the origin of lissamphibians. Syst. Biol. 56:369-388. (Pubitemid 46826901)
-
(2007)
Systematic Biology
, vol.56
, Issue.3
, pp. 369-388
-
-
Marjanovic, D.1
Laurin, M.2
-
45
-
-
53249095874
-
Assessing confdence intervals for stratigraphic ranges of higher taxa: The case of Lissamphibia
-
Marjanović D., Laurin M. 2008. Assessing confdence intervals for stratigraphic ranges of higher taxa: the case of Lissamphibia. Acta Palaeontol. Pol. 53:413-432.
-
(2008)
Acta Palaeontol. Pol
, vol.53
, pp. 413-432
-
-
Marjanović, D.1
Laurin, M.2
-
46
-
-
76349118282
-
The origin(s) of modern amphibians: A commentary
-
Marjanović D., Laurin M. 2009. The origin(s) of modern amphibians: a commentary Evol. Biol. 36:336-338.
-
(2009)
Evol Biol
, vol.36
, pp. 336-338
-
-
Marjanović, D.1
Laurin, M.2
-
47
-
-
43949092742
-
A simple method for bracketing absolute divergence times on molecular phylogenies using multiple fossil calibration points
-
DOI 10.1086/587523
-
Marshall C.R. 2008. A simple method for bracketing absolute divergence times on molecular phylogenies using multiple fossil calibration points. Am. Nat. 171:726-742. (Pubitemid 351706502)
-
(2008)
American Naturalist
, vol.171
, Issue.6
, pp. 726-742
-
-
Marshall, C.R.1
-
48
-
-
77649249692
-
Probabilistic models of chromosome number evolution and the inference of polyploidy
-
Mayrose I., Barker M.S., Otto S.P 2010. Probabilistic models of chromosome number evolution and the inference of polyploidy Syst. Biol. 59:132-144.
-
(2010)
Syst Biol
, vol.59
, pp. 132-144
-
-
Mayrose, I.1
Barker, M.S.2
Otto, S.P.3
-
49
-
-
33744997660
-
Evolutionary rates, divergence dates, and the performance of mitochondrial genes in Bayesian phylogenetic analysis
-
Mueller R.L. 2006. Evolutionary rates, divergence dates, and the performance of mitochondrial genes in Bayesian phylogenetic analysis. Syst. Biol. 55:289-300.
-
(2006)
Syst. Biol
, vol.55
, pp. 289-300
-
-
Mueller, R.L.1
-
50
-
-
27744565287
-
Four well-constrained calibration points from the vertebrate fossil record for molecular clock estimates
-
DOI 10.1002/bies.20286
-
Müller J., Reisz R.R. 2005. Four well-constrained calibration points from the vertebrate fossil record for molecular clock estimates. Bioessays. 27:1069-1075. (Pubitemid 41608963)
-
(2005)
BioEssays
, vol.27
, Issue.10
, pp. 1069-1075
-
-
Muller, J.1
Reisz, R.R.2
-
51
-
-
13944259078
-
Assessing concordance of fossil calibration points in molecular clock studies: An example using turtles
-
DOI 10.1086/427734
-
Near TJ., Meylan PA., Shaffer H.B. 2005. Assessing concordance of fossil calibration points in molecular clock studies: an example using turtles. Am. Nat. 165:137-146. (Pubitemid 40263656)
-
(2005)
American Naturalist
, vol.165
, Issue.2
, pp. 137-146
-
-
Near, T.J.1
Meylan, P.A.2
Shaffer, H.B.3
-
52
-
-
8144221423
-
Assessing the quality of molecular divergence time estimates by fossil calibrations and fossil-based model selection
-
DOI 10.198/rstb.2004.1523
-
Near TJ., Sanderson M.J. 2004. Assessing the quality of molecular divergence time estimates by fossil calibrations and fossil-based model selection. Philos. Trans. R. Soc. Lond. B Bio. Sci. 359:1477-1483. (Pubitemid 39471234)
-
(2004)
Philosophical Transactions of the Royal Society B: Biological Sciences
, vol.359
, Issue.1450
, pp. 1477-1483
-
-
Near, T.J.1
Sanderson, M.J.2
-
53
-
-
73849143937
-
Tetrapod trackways from the early Middle Devonian period of Poland
-
Niedźwiedzki G., Szrek P, Narkiewicz K., Narkiewicz M., Ahlberg PE. 2010. Tetrapod trackways from the early Middle Devonian period of Poland. Nature. 463:43-48.
-
(2010)
Nature
, vol.463
, pp. 43-48
-
-
Niedźwiedzki, G.1
Szrek, P.2
Narkiewicz, K.3
Narkiewicz, M.4
Ahlberg, P.E.5
-
54
-
-
49249086254
-
Impact of increased character sampling on the phylogeny of Cetartiodactyla (Mammalia): Combined analysis including fossils
-
O'Leary M.A., Gatesy J. 2008. Impact of increased character sampling on the phylogeny of Cetartiodactyla (Mammalia): combined analysis including fossils. Cladistics. 24:397-442.
-
(2008)
Cladistics
, vol.24
, pp. 397-442
-
-
O'Leary, M.A.1
Gatesy, J.2
-
55
-
-
0030728580
-
Correlated rates of molecular and morphological evolution
-
Omland K.E. 1997. Correlated rates of molecular and morphological evolution. Evolution. 51:1381-1393. (Pubitemid 27491136)
-
(1997)
Evolution
, vol.51
, Issue.5
, pp. 1381-1393
-
-
Omland, K.E.1
-
56
-
-
38349152557
-
Caveats on the use of fossil calibrations for molecular dating: A comment on near et al.
-
DOI 10.1086/524198
-
Parham J.F, Irmis R.B. 2008. Caveats on the use of fossil calibrations for molecular dating: a comment on Near et al. Am. Nat. 171:132-136. (Pubitemid 351226035)
-
(2008)
American Naturalist
, vol.171
, Issue.1
, pp. 132-136
-
-
Parham, J.F.1
Irmis, R.B.2
-
57
-
-
67349118917
-
Branch-length estimation bias misleads molecular dating for a vertebrate mitochondrial phylogeny
-
Phillips MJ. 2009. Branch-length estimation bias misleads molecular dating for a vertebrate mitochondrial phylogeny Gene. 441: 132-140.
-
(2009)
Gene
, vol.441
, pp. 132-140
-
-
Phillips, M.J.1
-
58
-
-
77649239840
-
A likelihood method for assessing molecular divergence time estimates and the placement of fossil calibrations
-
Pyron R.A. 2010. A likelihood method for assessing molecular divergence time estimates and the placement of fossil calibrations. Syst. Biol. 59:185-194.
-
(2010)
Syst. Biol
, vol.59
, pp. 185-194
-
-
Pyron, R.A.1
-
59
-
-
79951578515
-
The phylogeny of advanced snakes (Colubroidea), with discovery of a new subfamily and comparison of support methods for likelihood trees
-
Pyron R.A., Burbrink F.T, Colli G.R., Montes de Oca A.N., Vitt L.J., Kuczynski C.A., Wiens JJ. 2011. The phylogeny of advanced snakes (Colubroidea), with discovery of a new subfamily and comparison of support methods for likelihood trees. Mol. Phylogenet. Evol. 58:329-342.
-
(2011)
Mol. Phylogenet. Evol
, vol.58
, pp. 329-342
-
-
Pyron, R.A.1
Burbrink, F.T.2
Colli, G.R.3
Montes De Oca, A.N.4
Vitt, L.J.5
Kuczynski, C.A.6
Wiens, J.J.7
-
60
-
-
0034044313
-
Estimating the rate of molecular evolution: Incorporating non-contemporaneous sequences into maximum likelihood phylogenies
-
Rambaut A. 2000. Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies. Bioinformatics. 16:395-399. (Pubitemid 30417084)
-
(2000)
Bioinformatics
, vol.16
, Issue.4
, pp. 395-399
-
-
Rambaut, A.1
-
61
-
-
0036803348
-
Identifiability of parameters in MCMC Bayesian inference of phylogeny
-
DOI 10.1080/10635150290102429
-
Rannala B. 2002. Identifability of parameters in MCMC Bayesian inference of phylogeny Syst. Biol. 51:754-760. (Pubitemid 35294807)
-
(2002)
Systematic Biology
, vol.51
, Issue.5
, pp. 754-760
-
-
Rannala, B.1
-
63
-
-
0000932158
-
Proanuran stages (Triadobatrachus, Czatkobatrachus)
-
In: Heatwole H., Carroll R.L., editors Chipping Norton (UK): Surrey Beatty & Sons
-
Rocek Z., Rage J.-C. 2000. Proanuran stages (Triadobatrachus, Czatkobatrachus). In: Heatwole H., Carroll R.L., editors. Amphibianbiology. Chipping Norton (UK): Surrey Beatty & Sons. p. 1283-1294.
-
(2000)
Amphibianbiology
, pp. 1283-1294
-
-
Rocek, Z.1
Rage, J.-C.2
-
64
-
-
33846556329
-
Global patterns of diversification in the history of modern amphibians
-
DOI 10.1073/pnas.0608378104
-
Roelants K., Gower D.J., Wilkinson M., Loader S.P, Biju S.D., Guillaume K., Bossuyt F. 2007. Global patterns of diversifcation in the history of modern amphibians. Proc. Natl. Acad. Sci. U.S.A. 104:887-892. (Pubitemid 46154706)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.3
, pp. 887-892
-
-
Roelants, K.1
Gower, D.J.2
Wilkinson, M.3
Loader, S.P.4
Biju, S.D.5
Guillaume, K.6
Moriau, L.7
Bossuyt, F.8
-
65
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
DOI 10.1093/bioinformatics/btg180
-
Ronquist F, Huelsenbeck J.P 2003. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 19:1572-1574. (Pubitemid 37038874)
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
66
-
-
33745050119
-
How does the inclusion of fossil data change our conclusions about the phylogenetic history of euphyllophytes?
-
DOI 10.1086/503298
-
Rothwell G.W., Nixon K.C. 2006. How does the inclusion of fossil data change our conclusions about the phylogenetic history of euphyllophytes? Int. J. Plant Sci. 167:737-749. (Pubitemid 43878036)
-
(2006)
International Journal of Plant Sciences
, vol.167
, Issue.3
, pp. 737-749
-
-
Rothwell, G.W.1
Nixon, K.C.2
-
67
-
-
78651466770
-
Phylogenetic relationships of the Cretaceous frog Beelzebufo from Madagascar and the placement of fossil constraints based on temporal and phylogenetic evidence
-
Ruane S., Pyron R.A., Burbrink F.T. 2011. Phylogenetic relationships of the Cretaceous frog Beelzebufo from Madagascar and the placement of fossil constraints based on temporal and phylogenetic evidence. J. Evol. Biol. 24:274-285.
-
(2011)
J. Evol. Biol
, vol.24
, pp. 274-285
-
-
Ruane, S.1
Pyron, R.A.2
Burbrink, F.T.3
-
68
-
-
33846897432
-
Dates, nodes and character conflict: Addressing the lissamphibian origin problem
-
DOI 10.1017/S1477201906002008, PII S1477201906002008
-
Ruta M., Coates M.I. 2007. Dates, nodes and character confict: addressing the lissamphibian origin problem. J. Syst. Palaeontol. 5:69-122. (Pubitemid 46239125)
-
(2007)
Journal of Systematic Palaeontology
, vol.5
, Issue.1
, pp. 69-122
-
-
Ruta, M.1
Coates, M.I.2
-
69
-
-
34547468349
-
Assessing calibration uncertainty in molecular Dating: The Assignment of Fossils to Alternative Calibration Points
-
DOI 10.1080/10635150701491156, PII 780800883
-
Rutschmann F, Eriksson T, Salim K.A., Conti E. 2007. Assessing calibration uncertainty in molecular dating: the assignment of fossils to alternative calibration points. Syst. Biol. 56:591-608. (Pubitemid 47171633)
-
(2007)
Systematic Biology
, vol.56
, Issue.4
, pp. 591-608
-
-
Rutschmann, F.1
Eriksson, T.2
Salim, K.A.3
Conti, E.4
-
70
-
-
77953135165
-
A multilocus timescale for the origin of extant amphibians
-
San Mauro D. 2010. A multilocus timescale for the origin of extant amphibians. Mol. Phylogenet. Evol. 56:554-561.
-
(2010)
Mol. Phylogenet. Evol
, vol.56
, pp. 554-561
-
-
San Mauro, D.1
-
71
-
-
17644371360
-
Initial diversification of living amphibians predated the breakup of Pangaea
-
DOI 10.1086/429523
-
San Mauro D., Vences M., Alcobendas M., Zardoya R., Meyer A. 2005. Initial diversifcation of living amphibians predated the breakup of Pangaea. Am. Nat 165:590-599. (Pubitemid 40564592)
-
(2005)
American Naturalist
, vol.165
, Issue.5
, pp. 590-599
-
-
San Mauro, D.1
Vences, M.2
Alcobendas, M.3
Zardoya, R.4
Meyer, A.5
-
72
-
-
0003962214
-
Encyclopedia of palaeoherpetology, part 4
-
München (Germany): Dr Friedrich Pfeil
-
Sanchiz B. 1998. Encyclopedia of palaeoherpetology, part 4. Salientia. München (Germany): Dr Friedrich Pfeil.
-
(1998)
Salientia
-
-
Sanchiz, B.1
-
73
-
-
0036135468
-
Estimating absolute rates of molecular evolution and divergence times: A penalized likelihood approach
-
Sanderson M J. 2002. Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. Mol. Biol. Evol. 19:101-109. (Pubitemid 34008052)
-
(2002)
Molecular Biology and Evolution
, vol.19
, Issue.1
, pp. 101-109
-
-
Sanderson, M.J.1
-
74
-
-
12244251046
-
The importance of even highly incomplete fossil taxa in reconstructing the phylogenetic relationships of the tetraodontiformes (Acanthomorpha: Pisces)
-
Santini F., Tyler J.C. 2004. The importance of even highly incomplete fossil taxa in reconstructing the phylogenetic relationships of the Tetraodontiformes (Acanthomorpha: Pisces). Integr. Comp. Biol. 44:349-357. (Pubitemid 40112743)
-
(2004)
Integrative and Comparative Biology
, vol.44
, Issue.5
, pp. 349-357
-
-
Santini, F.1
Tyler, J.C.2
-
75
-
-
58549095320
-
Contrasted patterns of hyperdiversifcation in Mediterranean hotspots
-
Sauquet H., Weston PH., Anderson C.L., Barker N.P, Cantrill D.J., Mast A.R., Savolainen V. 2009. Contrasted patterns of hyperdiversifcation in Mediterranean hotspots. Proc. Natl. Acad. Sci. U.S.A. 106:221-225.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 221-225
-
-
Sauquet, H.1
Weston, P.H.2
Anderson, C.L.3
Barker, N.P.4
Cantrill, D.J.5
Mast, A.R.6
Savolainen, V.7
-
76
-
-
30744434043
-
Structure and implications of theories on the origin of lissamphibians
-
In: Arratia G., Wilson M.V.H., Cloutier R., editors Munich (Germany): Dr Friedrich Pfeil
-
Schoch R.R., Milner A.R. 2004. Structure and implications of theories on the origin of lissamphibians. In: Arratia G., Wilson M.V.H., Cloutier R., editors. Recent advances in the origin and early radiations of vertebrates. Munich (Germany): Dr Friedrich Pfeil.
-
(2004)
Recent Advances in the Origin and Early Radiations of Vertebrates
-
-
Schoch, R.R.1
Milner, A.R.2
-
77
-
-
77649131876
-
Branch length estimation and divergence dating: Estimates of error in Bayesian and maximum likelihood frameworks
-
Schwartz R.S., Mueller R.L. 2010. Branch length estimation and divergence dating: estimates of error in Bayesian and maximum likelihood frameworks. BMC Evol. Biol. 10:5.
-
(2010)
BMC Evol. Biol
, vol.10
, pp. 5
-
-
Schwartz, R.S.1
Mueller, R.L.2
-
78
-
-
0031152764
-
Tests of turtle phylogeny: Molecular, morphological and paleontological approaches
-
Shaffer H.B., Meylan P., McKnight M.L. 1997. Tests of turtle phylogeny: molecular, morphological and paleontological approaches. Syst. Biol. 46:235-268.
-
(1997)
Syst. Biol
, vol.46
, pp. 235-268
-
-
Shaffer, H.B.1
Meylan, P.2
McKnight, M.L.3
-
79
-
-
0027129017
-
Comparative variation of morphological and molecular evolution through geologic time: 28S ribosomal RNA versus morphology in echinoids
-
Smith A.B., Lafay B., Christen R. 1992. Comparative variation of morphological and molecular evolution through geologic time: 28S ribosomal RNA versus morphology in echinoids. Philos. Trans. R. Soc. Lond. B Bio. Sci. 338:365-382.
-
(1992)
Philos. Trans. R. Soc. Lond. B Bio. Sci
, vol.338
, pp. 365-382
-
-
Smith, A.B.1
Lafay, B.2
Christen, R.3
-
80
-
-
0031741182
-
Estimating the rate of evolution of the rate of molecular evolution
-
Thorne J.L., Kishino H., Painter I.S. 1998. Estimating the rate of Evolution of the rate of molecular evolution. Mol. Biol. Evol. 15:1647-1657. (Pubitemid 28550989)
-
(1998)
Molecular Biology and Evolution
, vol.15
, Issue.12
, pp. 1647-1657
-
-
Thorne, J.L.1
Kishino, H.2
Painter, I.S.3
-
81
-
-
2442471822
-
Cranial morphology and affinities of Microbrachis, and a reappraisal of the phylogeny and lifestyle of the first amphibians
-
Vallin G., Laurin M. 2004. Cranial morphology and affnities of Microbrachis, and a reappraisal of the phylogeny and lifestyle of the frst amphibians. J. Vert. Paleontol. 24:56-72. (Pubitemid 38653186)
-
(2004)
Journal of Vertebrate Paleontology
, vol.24
, Issue.1
, pp. 56-72
-
-
Vallin, G.1
Laurin, M.2
-
82
-
-
0345832031
-
The effect of external and internal fossil calibrations on the avian evolutionary timescale
-
van Tuinen M., Hedges S.B. 2004. The effect of external and internal fossil calibrations on the avian evolutionary timescale. J. Paleontol. 78:45-50. (Pubitemid 38092725)
-
(2004)
Journal of Paleontology
, vol.78
, Issue.1
, pp. 45-50
-
-
Van Tuinen, M.1
Hedges, S.B.2
-
83
-
-
0032225748
-
Does adding characters with missing data increase or decrease phylogenetic accuracy?
-
Wiens J.J. 1998. Does adding characters with missing data increase or decrease phylogenetic accuracy? Syst. Biol. 47:625-640. (Pubitemid 128370902)
-
(1998)
Systematic Biology
, vol.47
, Issue.4
, pp. 625-640
-
-
Wiens, J.J.1
-
84
-
-
0042905752
-
Missing data, incomplete taxa, and phylogenetic accuracy
-
DOI 10.1080/10635150309308
-
Wiens J.J. 2003. Missing data, incomplete taxa, and phylogenetic accuracy. Syst. Biol. 52:528-538. (Pubitemid 36990380)
-
(2003)
Systematic Biology
, vol.52
, Issue.4
, pp. 528-538
-
-
Wiens, J.J.1
-
85
-
-
34547681631
-
Global patterns of diversification and species richness in amphibians
-
DOI 10.1086/519396
-
Wiens J J. 2007. Global patterns of species richness and diversifcation in amphibians. Am. Nat. 170:S86-S106. (Pubitemid 47221675)
-
(2007)
American Naturalist
, vol.170
, Issue.SUPPL.
-
-
Wiens, J.J.1
-
86
-
-
67449110091
-
Paleontology, phylogenomics, and combined-data phylogenetics: Can molecular data improve phylogeny estimation for fossil taxa?
-
Wiens J.J. 2009. Paleontology, phylogenomics, and combined-data phylogenetics: can molecular data improve phylogeny estimation for fossil taxa? Syst. Biol. 58:87-99.
-
(2009)
Syst Biol
, vol.58
, pp. 87-99
-
-
Wiens, J.J.1
-
87
-
-
28644436536
-
Hylid frog phylogeny and sampling strategies for speciose clades
-
DOI 10.1080/10635150500234625
-
Wiens J.J., Fetzner J.W., Parkinson C.L., Reeder T.W. 2005. Hylid frog phylogeny and sampling strategies for speciose clades. Syst. Biol. 54:719-748. (Pubitemid 43142292)
-
(2005)
Systematic Biology
, vol.54
, Issue.5
, pp. 719-748
-
-
Wiens, J.J.1
Fetzner Jr., J.W.2
Parkinson, C.L.3
Reeder, T.W.4
-
88
-
-
78651454774
-
Combining phylogenomics and fossils in higher level squamate reptile phylogeny: Molecular data change the placement of fossil taxa
-
Wiens J.J., Kuczynski C.A., Townsend T., Reeder TW., Mulcahy D.G., Sites J.W. Jr. 2010. Combining phylogenomics and fossils in higher level squamate reptile phylogeny: molecular data change the placement of fossil taxa. Syst. Biol. 59:674-688.
-
(2010)
Syst. Biol
, vol.59
, pp. 674-688
-
-
Wiens, J.J.1
Kuczynski, C.A.2
Townsend, T.3
Reeder, T.W.4
Mulcahy, D.G.5
Sites Jr., J.W.6
-
89
-
-
69049083325
-
A mitogenomic perspective on the phylogeny and biogeography of living caecilians (Amphibia: Gymnophiona)
-
Zhang P, Wake M.H. 2009a. A mitogenomic perspective on the phylogeny and biogeography of living caecilians (Amphibia: Gymnophiona). Mol. Phylogenet. Evol. 53:479-491.
-
(2009)
Mol. Phylogenet. Evol
, vol.53
, pp. 479-491
-
-
Zhang, P.1
Wake, M.H.2
-
90
-
-
69249244262
-
Higher-level salamander relationships and divergence dates inferred from complete mitochondrial genomes
-
Zhang P, Wake D.B. 2009b. Higher-level salamander relationships and divergence dates inferred from complete mitochondrial genomes. Mol. Phylogenet. Evol. 53:492-508.
-
(2009)
Mol. Phylogenet. Evol
, vol.53
, pp. 492-508
-
-
Zhang, P.1
Wake, D.B.2
-
91
-
-
22844444149
-
Mitogenomic perspectives on the origin and phylogeny of living amphibians
-
DOI 10.1080/10635150590945278
-
Zhang P, Zhou H., Chen Y.-Q., Liu Y.F., Qu L.-H. 2005. Mitogenomic perspectives on the origin and phylogeny of living amphibians. Syst. Biol. 54:391-400. (Pubitemid 41040439)
-
(2005)
Systematic Biology
, vol.54
, Issue.3
, pp. 391-400
-
-
Zhang, P.1
Zhou, H.2
Chen, Y.-Q.3
Liu, Y.-F.4
Qu, L.-H.5
|