Short read illumina data for the de novo assembly of a non-model snail species transcriptome (radix balthica, basommatophora, pulmonata), and a comparison of assembler performance

BMC Genomics

Volumn 12, Issue , 2011, Pages

  Feldmeyer, Barbara ^a   Wheat, Christopher W ^b   Krezdorn, Nicolas ^c   Rotter, Björn ^c   Pfenninger, Markus ^a  

^a GOETHE UNIVERSITY   (Germany)

^b UNIVERSITY OF HELSINKI   (Finland)

^c GENXPRO GMBH   (Germany)

Author keywords

Mollusca; Next generation sequencing; Short read assembly

Indexed keywords

COMPLEMENTARY DNA; TRANSCRIPTOME;

ARTICLE; BASOMMATOPHORA; COMPUTER PROGRAM; CONTIG MAPPING; CONTROLLED STUDY; DNA SEQUENCE; EXPRESSED SEQUENCE TAG; GENOMICS; INFORMATION PROCESSING; MOLECULAR GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PULMONATA; RADIX BALTHICA; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SNAIL; ANIMAL; COMPARATIVE STUDY; GENE EXPRESSION PROFILING; GENETICS; METABOLISM; METHODOLOGY; MITOCHONDRIAL GENE; NUCLEOTIDE REPEAT;

BASOMMATOPHORA; GASTROPODA; LYMNAEIDAE; MOLLUSCA; PULMONATA; RADIX BALTHICA;

ANIMALS; DNA, COMPLEMENTARY; EXPRESSED SEQUENCE TAGS; GENE EXPRESSION PROFILING; GENES, MITOCHONDRIAL; REPETITIVE SEQUENCES, NUCLEIC ACID; SEQUENCE ANALYSIS; SNAILS;

EID: 79959249140     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-12-317     Document Type: Article

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