Association of APE1 and hOGG1 polymorphisms with colorectal cancer risk in a Turkish population

Current Medical Research and Opinion

Volumn 27, Issue 7, 2011, Pages 1295-1302

  Canbay, Emel ^a,d   Cakmakoglu, Bedia ^b   Zeybek, Umit ^b   Sozen, Seyma ^b   Cacina, Canan ^b   Gulluoglu, Mine ^c   Balik, Emre ^c   Bulut, Turker ^c   Yamaner, Sumer ^c   Bugra, Dursun ^c  

^a Basaksehir State Hospital   (Turkey)

^b ISTANBUL UNIVERSITY   (Turkey)

^c ISTANBUL UNIVERSITY   (Turkey)

^d Gelincik Apt ^*  (Turkey)

Author keywords

APE1; Cancer risk factors; Colorectal cancer; DNA repair genes; hOGG1; Polymorphism; XPD; XPG; XRCC1; XRCC3

Indexed keywords

ASPARTIC ACID; CYSTEINE; GLUTAMIC ACID; GLUTAMINE; HISTIDINE; LYSINE; METHIONINE; SERINE; THREONINE;

ADULT; AGED; APE1 GENE; ARTICLE; BLOOD SAMPLING; CANCER ADJUVANT THERAPY; CANCER GRADING; CANCER GROWTH; CANCER RISK; CANCER STAGING; CHEMORADIOTHERAPY; COLORECTAL CANCER; CONTROLLED STUDY; DNA REPAIR; FEMALE; GENE; GENE FREQUENCY; GENETIC ASSOCIATION; GENETIC POLYMORPHISM; GENOTYPE; HOGG1 GENE; HUMAN; LIVER METASTASIS; MAJOR CLINICAL STUDY; MALE; POLYMERASE CHAIN REACTION; TURKEY (REPUBLIC); XPD GENE; XPG GENE; XRCC1 GENE; XRCC3 GENE;

ADULT; AGED; CARCINOMA; CASE-CONTROL STUDIES; COLORECTAL NEOPLASMS; DNA GLYCOSYLASES; DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE; FEMALE; GENETIC PREDISPOSITION TO DISEASE; GENETICS, POPULATION; GENOME-WIDE ASSOCIATION STUDY; HUMANS; MALE; MIDDLE AGED; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; POLYMORPHISM, SINGLE NUCLEOTIDE; RISK; TURKEY;

EID: 79958864965     PISSN: 03007995     EISSN: 14734877     Source Type: Journal    
DOI: 10.1185/03007995.2011.573544     Document Type: Article

References (36)

1. Friedberg EC. DNA damage and repair. Nature 2003;421:436-40. (Pubitemid 36157951)
2. Lu AL, Li X, Gu Y, et al. Repair of oxidative DNA damage: mechanisms and functions. Cell Biochem Biophys 2001;35:141-70. (Pubitemid 33622685)
3. Benhamou S, Sarasin A. ERCC2/XPD gene polymorphisms and cancer risk. Mutagenesis 2002;17:463-9. (Pubitemid 35414774)
4. Schä rer OD. XPG: its products and biological roles. Adv Exp Med Biol 2008;637:83-92.
5. Khanna KK, Jackson SP. DNA double-strand breaks: signaling, repair and the cancer connection. Nat Genet 2001;27:247-54. (Pubitemid 32201842)
6. Naccarati A, Pardini B, Hemminki K, et al. Sporadic colorectal cancer and individual susceptibility: a review of the association studies investigating the role of DNA repair genetic polymorphisms. Mutat Res 2007;635:118-45. (Pubitemid 46756400)
7. Sliwinski T, Krupa R, Wisniewska-Jarosinska M, et al. Common polymorphisms in the XPD and hOGG1 genes are not associated with the risk of colorectal cancer in a Polish population. Tohoku J Exp Med 2009;218:185-91.
8. Gu D, Wang M, Wang M, et al. The DNA repair gene APE1 T1349G polymorphism and cancer risk: a meta-analysis of 27 case-control studies. Mutagenesis 2009; 24:507-12.
9. Abdel-Rahman SZ, Soliman AS, Bondy ML, et al. Inheritance of the 194Trp and the 399Gln variant alleles of the DNA repair gene XRCC1 are associated with increased risk of early-onset colorectal carcinoma in Egypt. Cancer Lett 2000;159:79-86.
10. Mort R, Mo L, McEwan C, et al. Lack of involvement of nucleotide excision repair gene polymorphisms in colorectal cancer. Br J Cancer 2003;89:333-7. (Pubitemid 36976325)
11. Improta G, Sgambato A, Bianchino G, et al. Polymorphisms of the DNA repair genes XRCC1 and XRCC3 and risk of lung and colorectal cancer: a case-control study in a Southern Italian population. Anticancer Res 2008;28:2941-6.
12. Yeh CC, Sung FC, Tang R, et al. Polymorphisms of the XRCC1, XRCC3, & XPD genes, and colorectal cancer risk: a case-control study in Taiwan. BMC Cancer 2005;5:12.
13. Engin AB, Karahalil B, Engin A, et al. Oxidative stress, Helicobacter pylori, and OGG1 Ser326Cys, XPC Lys939Gln, and XPD Lys751Gln polymorphisms in a Turkish population with colorectal carcinoma. Genet Test Mol Biomarkers 2010;14:559-64.
14. Miller SA, Dykes DD, Polesky HF. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 1988;16:1215.
15. Hu JJ, Smith TR, Miller MS, et al. Amino acid substitution variants of APE1 and XRCC1 genes associated with ionizing radiation sensitivity. Carcinogenesis 2001;22:917-22. (Pubitemid 32514958)
16. Le Marchand L, Donlon T, Lum-Jones A, et al. Association of the hOGG1 Ser326Cys polymorphism with lung cancer risk. Cancer Epidemiol Biomarkers Prev 2002;11:409-12. (Pubitemid 34408221)
17. Sturgis EM, Castillo EJ, Li L, et al. Polymorphisms of DNA repair gene XRCC1 in squamous cell carcinoma of the head and neck. Carcinogenesis 1999; 20:2125-9. (Pubitemid 29535314)
18. Moreno V, Gemignani F, Landi S, et al. Polymorphisms in genes of nucleotide and base excision repair: risk and prognosis of colorectal cancer. Clin Cancer Res 2006;12:2101-8.
19. Hansen R, Saebø M, Skjelbred CF, et al. GPX Pro198Leu and OGG1 Ser326Cys polymorphisms and risk of development of colorectal adenomas and colorectal cancer. Cancer Lett 2005;229:85-91. (Pubitemid 41262543)
20. Park HW, Kim IJ, Kang HC, et al. The hOGG1 Ser326Cys polymorphism is not associated with colorectal cancer risk. J Epidemiol 2007;17:156-60.
21. Pardini B, Naccarati A, Novotny J, et al. DNA repair genetic polymorphisms and risk of colorectal cancer in the Czech Republic. Mutat Res 2008;638: 146-53.
22. Hughes LA, van den Brandt PA, de Bruïne AP, et al. Early life exposure to famine and colorectal cancer risk: a role for epigenetic mechanisms. PLoS One 2009;23:e7951.
23. Kasahara M, Osawa K, Yoshida K, et al. Association of MUTYH Gln324His and APEX1 Asp148Glu with colorectal cancer and smoking in a Japanese population. J Exp Clin Cancer Res 2008;27:49.
24. Walker LJ, Robson CN, Black E, et al. Identification of residues in the human DNA repair enzyme HAP1 (Ref-1) that are essential for redox regulation of Jun DNA binding. Mol Cell Biol 1993;13:5370-6. (Pubitemid 23260640)
25. Hadi MZ, Coleman MA, Fidelis K, et al. Functional characterization of Ape1 variants identified in the human population. Nucleic Acids Res 2000; 28:3871-9.
26. Weiss JM, Goode EL, Ladiges WC, et al. Polymorphic variation in hOGG1 and risk of cancer: a review of the functional and epidemiologic literature. Mol Carcinog 2005;42:127-41. (Pubitemid 40271142)
27. Vodicka P, Stetina R, Polakova V, et al. Association of DNA repair polymorphisms with DNA repair functional outcomes in healthy human subjects. Carcinogenesis 2007;28:657-64. (Pubitemid 46523361)
28. Fedirko V, Tramacere I, Bagnardi V, et al. Alcohol drinking and colorectal cancer risk: an overall and dose-response meta-analysis of published studies. Ann Oncol 2011;9 [Epub ahead of print].
29. Krupa R, Blasiak J. An association of polymorphism of DNA repair genes XRCC1 and XRCC3 with colorectal cancer. J Exp Clin Cancer Res 2004; 23:285-94. (Pubitemid 38943561)
30. Wang B, Wang D, Huang G, et al. XRCC1 polymorphisms and risk of colorectal cancer: a meta-analysis. Int J Colorectal Dis 2010; 25:313-21.
31. Skjelbred CF, Saebø M, Wallin H, et al. Polymorphisms of the XRCC1, XRCC3 and XPD genes and risk of colorectal adenoma and carcinoma, in a Norwegian cohort: a case control study. BMC Cancer 2006;6:67.
32. Samowitz WS, Holden JA, Curtin K, et al. Inverse relationship between microsatellite instability and K-ras and p53 gene alterations in colon cancer. Am J Pathol 2001;158:1517-24. (Pubitemid 32281315)
33. Slattery ML, Curtin K, Wolff RK, et al. A comparison of colon and rectal somatic DNA alterations. Dis Colon Rectum 2009; 52:1304-11.
34. Jeong SY, Shin KH, Shin JH, et al. Microsatellite instability and mutations in DNA mismatch repair genes in sporadic colorectal cancers. Dis Colon Rectum 2009;46:1069-77.
35. Coggins RP, Cawkwell L, Bell SM, et al. Association between family history and mismatch repair in colorectal cancer. Gut 2005;54:636-642. (Pubitemid 40559247)
36. Danoy P, Sonoda E, Lathrop M, et al. A naturally occurring genetic variant of human XRCC2 (R188H) confers increased resistance to cisplatin-induced DNA damage. Biochem Biophys Res Commun 2007;352:763-8 (Pubitemid 44880321)