메뉴 건너뛰기




Volumn 62, Issue 9, 2011, Pages 3031-3037

Setaria viridis and Setaria italica, model genetic systems for the Panicoid grasses

Author keywords

Abiotic stress tolerance; biofuels; C 4 photosynthesis; domestication; Setaria italica; Setaria viridis

Indexed keywords

BIOFUEL;

EID: 79958774172     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/err096     Document Type: Review
Times cited : (268)

References (57)
  • 1
    • 0002229157 scopus 로고    scopus 로고
    • Foxtail and proso millet
    • Janick J, ed Alexandria VA: ASHS Press
    • Baltensperger D. 2002. Foxtail and proso millet. In: Janick J, ed. Trends in new crops and new users. Alexandria, VA: ASHS Press, 182-190.
    • (2002) Trends in New Crops and New Users , pp. 182-190
    • Baltensperger, D.1
  • 3
    • 77955991477 scopus 로고    scopus 로고
    • The age and diversification of the angiosperms re-revisited
    • Bell CD, Soltis DE, Soltis PS. 2010. The age and diversification of the angiosperms re-revisited. American Journal of Botany 97, 1296-1303.
    • (2010) American Journal of Botany , vol.97 , pp. 1296-1303
    • Bell, C.D.1    Soltis, D.E.2    Soltis, P.S.3
  • 4
    • 0034772338 scopus 로고    scopus 로고
    • Phylogenetic and genomic relationships in Setaria italica and its close relatives based on the molecular diversity and chromosomal organization of 5S and 18S-5.8S-25S rDNA genes
    • DOI 10.1007/s001220100596
    • Benabdelmouna A, Abirached-Darmency M, Darmency H. 2001. Phylogenetic and genomic relationships in Setaria italica and its close relatives based on the molecular diversity and chromosomal organization of 5S and 18S-5.8S-25S rDNA genes. Theoretical and Applied Genetics 103, 668-677. (Pubitemid 32996888)
    • (2001) Theoretical and Applied Genetics , vol.103 , Issue.5 , pp. 668-677
    • Benabdelmouna, A.1    Abirached-Darmency, M.2    Darmency, H.3
  • 8
    • 34447337260 scopus 로고    scopus 로고
    • 4 Photosynthesis Evolved in Grasses via Parallel Adaptive Genetic Changes
    • DOI 10.1016/j.cub.2007.06.036, PII S0960982207015734
    • 4 photosynthesis evolved in grasses via parallel adaptive genetic changes. Current Biology 17, 1241-1247. (Pubitemid 47053908)
    • (2007) Current Biology , vol.17 , Issue.14 , pp. 1241-1247
    • Christin, P.-A.1    Salamin, N.2    Savolainen, V.3    Duvall, M.R.4    Besnard, G.5
  • 11
    • 58449087371 scopus 로고    scopus 로고
    • Mechanisms of floral induction in grasses: Something borrowed, something new
    • Colasanti J, Coneva V. 2009. Mechanisms of floral induction in grasses: something borrowed, something new. Plant Physiology 149, 56-62.
    • (2009) Plant Physiology , vol.149 , pp. 56-62
    • Colasanti, J.1    Coneva, V.2
  • 12
    • 0342804407 scopus 로고    scopus 로고
    • Assessment of genetic relationships between Setaria italica and its wild relative S. viridis using AFLP markers
    • DOI 10.1007/s001220051387
    • d'Ennequin ML, Panaud O, Toupance B, Sarr A. 2000. Assessment of genetic relationships between Setaria italica and its wild relative S. viridis using AFLP markers. Theoretical and Applied Genetics 100, 1061-1066. (Pubitemid 30334049)
    • (2000) Theoretical and Applied Genetics , vol.100 , Issue.7 , pp. 1061-1066
    • D'Ennequin, M.L.T.1    Panaud, O.2    Toupance, B.3    Sarr, A.4
  • 13
    • 0002026022 scopus 로고
    • Weeds and domesticates: Evolution in the man-made habitat
    • de Wet JM, Harlan JR. 1975. Weeds and domesticates: evolution in the man-made habitat. Economic Botany 29, 99-107.
    • (1975) Economic Botany , vol.29 , pp. 99-107
    • De Wet, J.M.1    Harlan, J.R.2
  • 14
    • 32744463418 scopus 로고    scopus 로고
    • The foxtail (Setaria) species-group
    • DOI 10.1614/P2002-IR
    • Dekker J. 2003. The foxtail (Setaria) species-group. Weed Science 51, 641-656. (Pubitemid 43666302)
    • (2003) Weed Science , vol.51 , Issue.5 , pp. 641-656
    • Dekker, J.1
  • 15
    • 0031935263 scopus 로고    scopus 로고
    • Comparative genetic maps of foxtail millet (Setaria italica) and rice (Oryza sativa)
    • DOI 10.1007/s001220050709
    • Devos KM, Wang ZM, Beales J, Sasaki Y, Gale MD. 1998. Comparative genetic maps of foxtail millet (Setaria italica) and rice (Oryza sativa). Theoretical and Applied Genetics 96, 63-68. (Pubitemid 28139589)
    • (1998) Theoretical and Applied Genetics , vol.96 , Issue.1 , pp. 63-68
    • Devos, K.M.1    Wang, Z.M.2    Beales, J.3    Gale, M.D.4    Sasaki, T.5
  • 16
    • 58449112390 scopus 로고    scopus 로고
    • Advances in foxtail millet biotechnology and its future directions
    • Diao X. 2005. Advances in foxtail millet biotechnology and its future directions. Journal of Hebei Agricultural Sciences 9, 61-68.
    • (2005) Journal of Hebei Agricultural Sciences , vol.9 , pp. 61-68
    • Diao, X.1
  • 17
    • 58449132254 scopus 로고    scopus 로고
    • Foxtail millet production in China and its future development tendency
    • Chai Y, Wan FS, eds Beijing. Chinese Agricultural Science and Technology Press
    • Diao X. 2007. Foxtail millet production in China and its future development tendency. In: Chai Y, Wan FS, eds. The industrial development of China special crops. Beijing. Chinese Agricultural Science and Technology Press, 32-43.
    • (2007) The Industrial Development of China Special Crops , pp. 32-43
    • Diao, X.1
  • 18
    • 0025943740 scopus 로고
    • Genetic analysis of the morphological differences between maize and teosinte
    • Doebley J, Stec A. 1991. Genetic analysis of the morphological differences between maize and teosinte. Genetics 129, 285-295.
    • (1991) Genetics , vol.129 , pp. 285-295
    • Doebley, J.1    Stec, A.2
  • 19
    • 33845618112 scopus 로고    scopus 로고
    • The Molecular Genetics of Crop Domestication
    • DOI 10.1016/j.cell.2006.12.006, PII S0092867406015923
    • Doebley JF, Gaut BS, Smith BD. 2006. The molecular genetics of crop domestication. Cell 127, 1309-1321. (Pubitemid 44960415)
    • (2006) Cell , vol.127 , Issue.7 , pp. 1309-1321
    • Doebley, J.F.1    Gaut, B.S.2    Smith, B.D.3
  • 21
    • 17444395887 scopus 로고    scopus 로고
    • The genetic basis for inflorescence variation between foxtail and green millet (Poaceae)
    • DOI 10.1534/genetics.104.035543
    • Doust AN, Devos KM, Gadberry MD, Gale MD, Kellogg EA. 2005. The genetic basis for inflorescence variation between foxtail and green millet (Poaceae). Genetics 169, 1659-1672. (Pubitemid 40547473)
    • (2005) Genetics , vol.169 , Issue.3 , pp. 1659-1672
    • Doust, A.N.1    Devos, K.M.2    Gadberry, M.D.3    Gale, M.D.4    Kellogg, E.A.5
  • 22
    • 0036678852 scopus 로고    scopus 로고
    • Inflorescence diversification in the panicoid "bristle grass" clade (Paniceae, Poaceae): Evidence from molecular phylogenies and developmental morphology
    • Doust AN, Kellogg EA. 2002. Inflorescence diversification in the panicoid 'bristle grass' clade (Paniceae, Poaceae): evidence from molecular phylogenies and developmental morphology. American Journal of Botany 89, 1203-1222. (Pubitemid 34915469)
    • (2002) American Journal of Botany , vol.89 , Issue.8 , pp. 1203-1222
    • Doust, A.N.1    Kellogg, E.A.2
  • 25
    • 3042527892 scopus 로고    scopus 로고
    • The molecular basis of diversity in the photoperiodic flowering responses of arabidopsis and rice
    • DOI 10.1104/pp.104.042614
    • Hayama R, Coupland G. 2004. The molecular basis of diversity in the photoperiodic flowering responses of Arabidopsis and rice. Plant Physiology 135, 677-684. (Pubitemid 38819013)
    • (2004) Plant Physiology , vol.135 , Issue.2 , pp. 677-684
    • Hayama, R.1    Coupland, G.2
  • 26
    • 77956334725 scopus 로고    scopus 로고
    • Comparative genomics of flowering time pathways using Brachypodium distachyon as a model for the temperate grasses
    • Higgins JA, Bailey PC, Laurie DA. 2010. Comparative genomics of flowering time pathways using Brachypodium distachyon as a model for the temperate grasses. PLoS One 5, e10065.
    • (2010) PLoS One , vol.5
    • Higgins, J.A.1    Bailey, P.C.2    Laurie, D.A.3
  • 27
    • 78049332150 scopus 로고    scopus 로고
    • Genome-wide association studies of 14 agronomic traits in rice landraces
    • Huang X, Wei X, Sang T, et al. 2010. Genome-wide association studies of 14 agronomic traits in rice landraces. Nature Genetics 42, 961-967.
    • (2010) Nature Genetics , vol.42 , pp. 961-967
    • Huang, X.1    Wei, X.2    Sang, T.3
  • 28
    • 62349107421 scopus 로고    scopus 로고
    • CDNA-AFLP analysis reveals differential gene expression in response to salt stress in foxtail millet (Setaria italica L.)
    • Jayaraman A, Puranik S, Rai NK, Vidapu S, Sahu PP, Lata C, Prasad M. 2008. cDNA-AFLP analysis reveals differential gene expression in response to salt stress in foxtail millet (Setaria italica L.). Molecular Biotechnology 40, 241-251.
    • (2008) Molecular Biotechnology , vol.40 , pp. 241-251
    • Jayaraman, A.1    Puranik, S.2    Rai, N.K.3    Vidapu, S.4    Sahu, P.P.5    Lata, C.6    Prasad, M.7
  • 29
    • 70349451699 scopus 로고    scopus 로고
    • Flowering time control and applications in plant breeding
    • Jung C, Muller AE. 2009. Flowering time control and applications in plant breeding. Trends in Plant Science 14, 563-573.
    • (2009) Trends in Plant Science , vol.14 , pp. 563-573
    • Jung, C.1    Muller, A.E.2
  • 30
    • 77949487226 scopus 로고    scopus 로고
    • Comparative transcriptome analysis of differentially expressed genes in foxtail millet (Setaria italica L.) during dehydration stress
    • Lata C, Sahu PP, Prasad M. 2010. Comparative transcriptome analysis of differentially expressed genes in foxtail millet (Setaria italica L.) during dehydration stress. Biochemical and Biophysical Research Communications 393, 720-727.
    • (2010) Biochemical and Biophysical Research Communications , vol.393 , pp. 720-727
    • Lata, C.1    Sahu, P.P.2    Prasad, M.3
  • 31
    • 0036009358 scopus 로고    scopus 로고
    • 3 plants
    • 2concentration and prospects for its introduction into C(3) plants. Journal of Experimental Botany 53, 581-590. (Pubitemid 34253551)
    • (2002) Journal of Experimental Botany , vol.53 , Issue.369 , pp. 581-590
    • Leegood, R.C.1
  • 32
    • 0002946285 scopus 로고
    • Cytological and genetical studies of the interspecific cross of the cultivated foxtail millet, Setaria italica (L.) Beauv., and the green foxtail millet, S. viridis L
    • Li HW, Li CH, Pao WK. 1945. Cytological and genetical studies of the interspecific cross of the cultivated foxtail millet, Setaria italica (L.) Beauv., and the green foxtail millet, S. viridis L. Agronomy Journal 9, 32-54.
    • (1945) Agronomy Journal , vol.9 , pp. 32-54
    • Li, H.W.1    Li, C.H.2    Pao, W.K.3
  • 33
    • 78649488563 scopus 로고    scopus 로고
    • The developmental dynamics of the maize leaf transcriptome
    • Li P, Ponnala L, Gandotra N, et al. 2010. The developmental dynamics of the maize leaf transcriptome. Nature Genetics 42, 1060-1067.
    • (2010) Nature Genetics , vol.42 , pp. 1060-1067
    • Li, P.1    Ponnala, L.2    Gandotra, N.3
  • 34
    • 34250002899 scopus 로고    scopus 로고
    • Drought-resistant mechanism and genetic expression of foxtail millet
    • Li YM, ed Beijing: China Agricultural Press
    • Li YM. 1997. Drought-resistant mechanism and genetic expression of foxtail millet. In: Li YM, ed. Foxtail millet breeding. Beijing: China Agricultural Press, 433-434.
    • (1997) Foxtail Millet Breeding , pp. 433-434
    • Li, Y.M.1
  • 35
    • 62349102325 scopus 로고    scopus 로고
    • Next is now: New technologies for sequencing of genomes, transcriptomes, and beyond
    • Lister R, Gregory BD, Ecker JR. 2009. Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond. Current Opinion in Plant Biology 12, 107-118.
    • (2009) Current Opinion in Plant Biology , vol.12 , pp. 107-118
    • Lister, R.1    Gregory, B.D.2    Ecker, J.R.3
  • 36
    • 0033383531 scopus 로고    scopus 로고
    • Epistatic and environmental interactions for quantitative trait loci involved in maize evolution
    • DOI 10.1017/S0016672399004073
    • Lukens LN, Doebley J. 1999. Epistatic and environmental interactions for quantitative trait loci involved in maize evolution. Genetical Research 74, 291-302. (Pubitemid 30076807)
    • (1999) Genetical Research , vol.74 , Issue.3 , pp. 291-302
    • Lukens, L.N.1    Doebley, J.2
  • 37
  • 38
    • 84967551387 scopus 로고    scopus 로고
    • 4 rice
    • Sheehy JE, Mitchell PL, Hardy B, eds Los Banos, Philippines: International Rice Research Institute
    • 4 rice. In: Sheehy JE, Mitchell PL, Hardy B, eds. Charting new pathways to C4 rice. Los Banos, Philippines: International Rice Research Institute, 27-36.
    • (2007) Charting New Pathways to C4 Rice , pp. 27-36
    • Mitchell, P.L.1    Sheehy, J.E.2
  • 39
    • 58449137410 scopus 로고    scopus 로고
    • The Sorghum bicolor genome and the diversification of grasses
    • Paterson AH, Bowers JE, Bruggmann R, et al. 2009. The Sorghum bicolor genome and the diversification of grasses. Nature 457, 551-556.
    • (2009) Nature , vol.457 , pp. 551-556
    • Paterson, A.H.1    Bowers, J.E.2    Bruggmann, R.3
  • 40
    • 78650418860 scopus 로고    scopus 로고
    • Comparative transcriptome analysis of contrasting foxtail millet cultivars in response to short-term salinity stress
    • Puranik S, Jha S, Srivastava PS, Sreenivasulu N, Prasad M. 2010. Comparative transcriptome analysis of contrasting foxtail millet cultivars in response to short-term salinity stress. Journal of Plant Physiology 168, 280-287.
    • (2010) Journal of Plant Physiology , vol.168 , pp. 280-287
    • Puranik, S.1    Jha, S.2    Srivastava, P.S.3    Sreenivasulu, N.4    Prasad, M.5
  • 41
    • 58449102651 scopus 로고    scopus 로고
    • Characterization of world's foxtail millet germplasm collections for morphological traits
    • Reddy V, Upadhyaya HD, Gowda C. 2006. Characterization of world's foxtail millet germplasm collections for morphological traits. Journal of SAT Agricultural Research 2, 1-3.
    • (2006) Journal of SAT Agricultural Research , vol.2 , pp. 1-3
    • Reddy, V.1    Upadhyaya, H.D.2    Gowda, C.3
  • 42
    • 70450202132 scopus 로고    scopus 로고
    • The B73 maize genome: Complexity, diversity, and dynamics
    • Schnable PS, Ware D, Fulton RS, et al. 2009. The B73 maize genome: complexity, diversity, and dynamics. Science 326, 1112-1115.
    • (2009) Science , vol.326 , pp. 1112-1115
    • Schnable, P.S.1    Ware, D.2    Fulton, R.S.3
  • 43
    • 84967560735 scopus 로고    scopus 로고
    • How the rice crop works and why it needs a new engine
    • Sheehy JE, Mitchell PL, Hardy B, eds Los Banos, Philippines: International Rice Research Institute
    • Sheehy JE, Ferrer AB, Mitchell PL, Elmido-Mabilangan A, Pablico P, Dionara MJA. 2007. How the rice crop works and why it needs a new engine. In: Sheehy JE, Mitchell PL, Hardy B, eds. Charting new pathways to C4 rice. Los Banos, Philippines: International Rice Research Institute, 3-26.
    • (2007) Charting New Pathways to C4 Rice , pp. 3-26
    • Sheehy, J.E.1    Ferrer, A.B.2    Mitchell, P.L.3    Elmido-Mabilangan, A.4    Pablico, P.5    Mja, D.6
  • 45
    • 2342565696 scopus 로고    scopus 로고
    • Transcriptome changes in foxtail millet genotypes at high salinity: Identification and characterization of a PHGPX gene specifically up-regulated by NaCl in a salt-tolerant line
    • DOI 10.1078/0176-1617-01112
    • Sreenivasulu N, Miranda M, Prakash HS, Wobus U, Weschke W. 2004. Transcriptome changes in foxtail millet genotypes at high salinity: identification and characterization of a PHGPX gene specifically up-regulated by NaCl in a salt-tolerant line. Journal of Plant Physiology 161, 467-477. (Pubitemid 38600676)
    • (2004) Journal of Plant Physiology , vol.161 , Issue.4 , pp. 467-477
    • Sreenivasulu, N.1    Miranda, M.2    Prakash, H.S.3    Wobus, U.4    Weschke, W.5
  • 46
    • 14844313712 scopus 로고    scopus 로고
    • Using genome scans of DNA polymorphism to infer adaptive population divergence
    • DOI 10.1111/j.1365-294X.2004.02437.x
    • Storz JF. 2005. Using genome scans of DNA polymorphism to infer adaptive population divergence. Molecular Ecology 14, 671-688. (Pubitemid 40346460)
    • (2005) Molecular Ecology , vol.14 , Issue.3 , pp. 671-688
    • Storz, J.F.1
  • 47
    • 76749150030 scopus 로고    scopus 로고
    • Genome sequencing and analysis of the model grass Brachypodium distachyon
    • Vogel JP, Garvin DF, Mockler TC, et al. 2010. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463, 763-768.
    • (2010) Nature , vol.463 , pp. 763-768
    • Vogel, J.P.1    Garvin, D.F.2    Mockler, T.C.3
  • 49
    • 77951998724 scopus 로고    scopus 로고
    • Exploring plant transcriptomes using ultra high-throughput sequencing
    • Wang L, Li P, Brutnell TP. 2010b. Exploring plant transcriptomes using ultra high-throughput sequencing. Briefings in Functional Genomics 9, 118-128.
    • (2010) Briefings in Functional Genomics , vol.9 , pp. 118-128
    • Wang, L.1    Li, P.2    Brutnell, T.P.3
  • 50
    • 0029137559 scopus 로고
    • Weedy adaptation in Setaria Spp.1. Isozyme analysis of genetic diversity and population genetic-structure in Setaria viridis
    • Wang RL, Wendel JF, Dekker JH. 1995. Weedy adaptation in Setaria Spp.1. Isozyme analysis of genetic diversity and population genetic-structure in Setaria viridis. American Journal of Botany 82, 308-317.
    • (1995) American Journal of Botany , vol.82 , pp. 308-317
    • Wang, R.L.1    Wendel, J.F.2    Dekker, J.H.3
  • 52
    • 0031934365 scopus 로고    scopus 로고
    • Construction of RFLP-based maps of foxtail millet, Setaria italica (L.) P. Beauv
    • DOI 10.1007/s001220050705
    • Wang ZM, Devos KM, Liu CJ, Wang RQ, Gale MD. 1998. Construction of RFLP-based maps of foxtail millet, Setaria italica (L.) P. Beauv. Theoretical and Applied Genetics 96, 31-36. (Pubitemid 28139585)
    • (1998) Theoretical and Applied Genetics , vol.96 , Issue.1 , pp. 31-36
    • Wang, Z.M.1    Devos, K.M.2    Liu, C.J.3    Wang, R.Q.4    Gale, M.D.5
  • 54
    • 0031803817 scopus 로고    scopus 로고
    • Involvement of maize Dof zinc finger proteins in tissue-specific and light-regulated gene expression
    • DOI 10.1105/tpc.10.1.75
    • Yanagisawa S, Sheen J. 1998. Involvement of maize Dof zinc finger proteins in tissue-specific and light-regulated gene expression. The Plant Cell 10, 75-89. (Pubitemid 28309816)
    • (1998) Plant Cell , vol.10 , Issue.1 , pp. 75-89
    • Yanagisawa, S.1    Sheen, J.2
  • 55
    • 34250017702 scopus 로고    scopus 로고
    • Construction and application of EST library from Setaria italica in response to dehydration stress
    • DOI 10.1016/j.ygeno.2007.03.016, PII S0888754307000730
    • Zhang J, Liu T, Fu J, Zhu Y, Jia J, Zheng J, Zhao Y, Zhang Y, Wang G. 2007. Construction and application of EST library from Setaria italica in response to dehydration stress. Genomics 90, 121-131. (Pubitemid 46891741)
    • (2007) Genomics , vol.90 , Issue.1 , pp. 121-131
    • Zhang, J.1    Liu, T.2    Fu, J.3    Zhu, Y.4    Jia, J.5    Zheng, J.6    Zhao, Y.7    Zhang, Y.8    Wang, G.9
  • 56
    • 33847661877 scopus 로고    scopus 로고
    • Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: Severe bottleneck during domestication of rice
    • DOI 10.1093/molbev/msm005
    • Zhu Q, Zheng X, Luo J, Gaut BS, Ge S. 2007. Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice. Molecular Biology and Evolution 24, 875-888. (Pubitemid 46355812)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.3 , pp. 875-888
    • Zhu, Q.1    Zheng, X.2    Luo, J.3    Gaut, B.S.4    Ge, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.