Identification of malic and soluble oxaloacetate decarboxylase enzymes in Enterococcus faecalis

FEBS Journal

Volumn 278, Issue 12, 2011, Pages 2140-2151

  Espariz, Martín ^a   Repizo, Guillermo ^a   Blancato, Víctor ^a   Mortera, Pablo ^b   Alarcõn, Sergio ^b   Magni, Christian ^a,c  

^a UNIVERSIDAD NACIONAL DE ROSARIO   (Argentina)

^b Universidad Nacional de Rosario   (Argentina)

^c Instituto de Biologia Molecular y Celular de Rosario   (Argentina)

Author keywords

citrate metabolism; Enterococcus faecalis; malate metabolism; malic enzyme; oxaloacetate decarboxylase

Indexed keywords

CITRIC ACID; MALATE DEHYDROGENASE (DECARBOXYLATING); MALIC ACID; PROTEIN CITM; PROTEIN MAEE; UNCLASSIFIED DRUG;

ACIDITY; ALKALINIZATION; ARTICLE; BACTERIAL GENETICS; BINDING AFFINITY; BIOCHEMISTRY; CITM GENE; CONTROLLED STUDY; ENTEROCOCCUS FAECALIS; ENZYME ANALYSIS; ENZYME KINETICS; FERMENTATION; GENE DELETION; MAEE GENE; NONHUMAN; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BASE SEQUENCE; CARBOXY-LYASES; CITRIC ACID; CLONING, MOLECULAR; DNA, BACTERIAL; ENTEROCOCCUS FAECALIS; FERMENTATION; GENES, BACTERIAL; HYDROGEN-ION CONCENTRATION; KINETICS; MALATE DEHYDROGENASE; MALATES; MOLECULAR SEQUENCE DATA; PHYLOGENY; RECOMBINANT PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; SOLUBILITY;

ENTEROCOCCUS FAECALIS; ESCHERICHIA COLI;

EID: 79958167510     PISSN: 1742464X     EISSN: 17424658     Source Type: Journal    
DOI: 10.1111/j.1742-4658.2011.08131.x     Document Type: Article

References (43)

1. Chang GG, &, Tong L, (2003) Structure and function of malic enzymes, a new class of oxidative decarboxylases. Biochemistry 42, 12721-12733. (Pubitemid 37385803)
2. Viljoen M, Subden RE, Krizus A, &, Van Vuuren HJ, (1994) Molecular analysis of the malic enzyme gene (mae2) of Schizosaccharomyces pombe. Yeast 10, 613-624. (Pubitemid 24178981)
3. Mitsch MJ, Voegele RT, Cowie A, Osteras M, &, Finan TM, (1998) Chimeric structure of the NAD(P)+- and NADP+-dependent malic enzymes of Rhizobium (Sinorhizobium) meliloti. J Biol Chem 273, 9330-9336. (Pubitemid 28176228)
4. Bologna FP, Andreo CS, &, Drincovich MF, (2007) Escherichia coli malic enzymes: two isoforms with substantial differences in kinetic properties, metabolic regulation, and structure. J Bacteriol 189, 5937-5946. (Pubitemid 47236146)
5. Lerondel G, Doan T, Zamboni N, Sauer U, &, Aymerich S, (2006) YtsJ has the major physiological role of the four paralogous malic enzyme isoforms in Bacillus subtilis. J Bacteriol 188, 4727-4736. (Pubitemid 43956071)
6. Groisillier A, &, Lonvaud-Funel A, (1999) Comparison of partial malolactic enzyme gene sequences for phylogenetic analysis of some lactic acid bacteria species and relationships with the malic enzyme. Int J Syst Bacteriol 49, 1417-1428. (Pubitemid 29519071)
7. Sender PD, Martin MG, Peiru S, &, Magni C, (2004) Characterization of an oxaloacetate decarboxylase that belongs to the malic enzyme family. FEBS Lett 570, 217-222. (Pubitemid 38900984)
8. Lolkema JS, Poolman B, &, Konings WN, (1995) Role of scalar protons in metabolic energy generation in lactic acid bacteria. J Bioenerg Biomembr 27, 467-473.
9. Lemme A, Sztajer H, &, Wagner-Dobler I, (2010) Characterization of mleR, a positive regulator of malolactic fermentation and part of the acid tolerance response in Streptococcus mutans. BMC Microbiol 10, 58.
10. Magni C, de Mendoza D, Konings WN, &, Lolkema JS, (1999) Mechanism of citrate metabolism in Lactococcus lactis: resistance against lactate toxicity at low pH. J Bacteriol 181, 1451-1457. (Pubitemid 29110803)
11. Giraffa G, (2003) Functionality of enterococci in dairy products. Int J Food Microbiol 88, 215-222. (Pubitemid 37329498)
12. Foulquie Moreno MR, Sarantinopoulos P, Tsakalidou E, &, De Vuyst L, (2006) The role and application of enterococci in food and health. Int J Food Microbiol 106, 1-24. (Pubitemid 41820898)
13. Leblanc DJ, (2006) Enterococcus. In Prokaryotes (, Dworkin M, Falkow S, Rosenberg E, Schleifer K, &, Stackenbrandt E, eds), pp. 205-228. Springer, New York, NY.
14. Kawai S, Suzuki H, Yamamoto K, Inui M, Yukawa H, &, Kumagai H, (1996) Purification and characterization of a malic enzyme from the ruminal bacterium Streptococcus bovis ATCC 15352 and cloning and sequencing of its gene. Appl Environ Microbiol 62, 2692-2700.
15. Sobczak I, &, Lolkema JS, (2005) The 2-hydroxycarboxylate transporter family: physiology, structure, and mechanism. Microbiol Mol Biol Rev 69, 665-695. (Pubitemid 41798467)
16. Golby P, Davies S, Kelly DJ, Guest JR, &, Andrews SC, (1999) Identification and characterization of a two-component sensor-kinase and response-regulator system (DcuS-DcuR) controlling gene expression in response to C4-dicarboxylates in Escherichia coli. J Bacteriol 181, 1238-1248. (Pubitemid 29119563)
17. Tanaka K, Kobayashi K, &, Ogasawara N, (2003) The Bacillus subtilis YufLM two-component system regulates the expression of the malate transporters MaeN (YufR) and YflS, and is essential for utilization of malate in minimal medium. Microbiology 149, 2317-2329. (Pubitemid 37160709)
18. Landete JM, Garcia-Haro L, Blasco A, Manzanares P, Berbegal C, Monedero V, &, Zuniga M, (2010) Requirement of the Lactobacillus casei MaeKR two-component system for l-malic acid utilization via a malic enzyme pathway. Appl Environ Microbiol 76, 84-95.
19. Blancato VS, Magni C, &, Lolkema JS, (2006) Functional characterization and Me ion specificity of a Ca-citrate transporter from Enterococcus faecalis. FEBS J 273, 5121-5130. (Pubitemid 44673301)
20. Blancato VS, Repizo GD, Suarez CA, &, Magni C, (2008) Transcriptional regulation of the citrate gene cluster of Enterococcus faecalis involves the GntR family transcriptional activator CitO. J Bacteriol 190, 7419-7430.
21. Bott M, (1997) Anaerobic citrate metabolism and its regulation in enterobacteria. Arch Microbiol 167, 78-88. (Pubitemid 27141756)
22. Hansen EJ, &, Juni E, (1975) Isolation of mutants of Escherichia coli lacking NAD- and NADP-linked malic. Biochem Biophys Res Commun 65, 559-566.
23. Edwards GE, &, Andreo CS, (1992) NADP-malic enzyme from plants. Phytochemistry 31, 1845-1857.
24. Driscoll BT, &, Finan TM, (1997) Properties of NAD(+)- and NADP(+)-dependent malic enzymes of Rhizobium (Sinorhizobium) meliloti and differential expression of their genes in nitrogen-fixing bacteroids. Microbiology 143, 489-498. (Pubitemid 27092185)
25. Chen F, Okabe Y, Osano K, &, Tajima S, (1997) Purification and characterization of the NADP-malic enzyme from Bradyrhizobium japonicum A1017. Biosci Biotechnol Biochem 61, 384-386. (Pubitemid 27206824)
26. Chen F, Okabe Y, Osano K, &, Tajima S, (1998) Purification and characterization of an NAD-malic enzyme from Bradyrhizobium japonicum A1017. Appl Environ Microbiol 64, 4073-4075. (Pubitemid 28463019)
27. London J, &, Meyer EY, (1969) Malate utilization by a group D Streptococcus. II. Evidence for allosteric inhibition of an inducible malate dehydrogenase (decarboxylating) by ATP and glycolytic intermediate products. Biochim Biophys Acta 178, 205-212.
28. Voegele RT, Mitsch MJ, &, Finan TM, (1999) Characterization of two members of a novel malic enzyme class. Biochim Biophys Acta 1432, 275-285. (Pubitemid 29304535)
29. Blancato VS, &, Magni C, (2010) A chimeric vector for efficient chromosomal modification in Enterococcus faecalis and other lactic acid bacteria. Lett Appl Microbiol 50, 542-546.
30. Martell AE, &, Smith RM, (1989) Critical Stability Constants, 2nd edn. Plenum, New York, NY.
31. Hsu WC, Hung HC, Tong L, &, Chang GG, (2004) Dual functional roles of ATP in the human mitochondrial malic enzyme. Biochemistry 43, 7382-7390. (Pubitemid 38745755)
32. Aktas DF, &, Cook PF, (2008) Proper positioning of the nicotinamide ring is crucial for the Ascaris suum malic enzyme reaction. Biochemistry 47, 2539-2546. (Pubitemid 351304559)
33. Garcia-Quintans N, Magni C, de Mendoza D, &, Lopez P, (1998) The citrate transport system of Lactococcus lactis subsp. lactis biovar diacetylactis is induced by acid stress. Appl Environ Microbiol 64, 850-857. (Pubitemid 28108456)
34. Sambrook J, Fritsch EF, &, Maniatis T, (1989) Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
35. 2+-citrate transporter CitM. Microbiology 148, 3405-3412. (Pubitemid 35414452)
36. Sarantinopoulos P, Kalantzopoulos G, &, Tsakalidou E, (2001) Citrate metabolism by Enterococcus faecalis FAIR-E 229. Appl Environ Microbiol 67, 5482-5487. (Pubitemid 33640979)
37. Maguin E, Prevost H, Ehrlich SD, &, Gruss A, (1996) Efficient insertional mutagenesis in Lactococci and other gram-positive bacteria. J Bacteriol 178, 931-935. (Pubitemid 26036674)
38. Friesenegger A, Fiedler S, Devriese LA, &, Wirth R, (1991) Genetic transformation of various species of Enterococcus by electroporation. FEMS Microbiol Lett 63, 323-327.
39. Laemmli UK, (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685.
40. Breeuwer P, Drocourt J, Rombouts FM, &, Abee T, (1996) A novel method for continuous determination of the intracellular pH in bacteria with the internally conjugated fluorescent probe 5 (and 6-)-carboxyfluorescein succinimidyl ester. Appl Environ Microbiol 62, 178-183.
41. Molenaar D, Abee T, &, Konings WN, (1991) Continuous measurement of the cytoplasmic pH in Lactococcus lactis with a fluorescent pH indicator. Biochim Biophys Acta 1115, 75-83.
42. Tamura K, Dudley J, Nei M, &, Kumar S, (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599. (Pubitemid 47236692)
43. Saitou N, &, Nei M, (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.