Separation of arteries and veins in the cerebral cortex using physiological oscillations by optical imaging of intrinsic signal

Journal of Biomedical Optics

Volumn 15, Issue 3, 2010, Pages

  Hu, Dewen ^a   Wang, Yucheng ^a   Liu, Yadong ^a   Li, Ming ^a   Liu, Fayi ^b  

^a NATIONAL UNIVERSITY OF DEFENSE TECHNOLOGY   (China)

^b Central South University   (China)

Author keywords

Fuzzy c means; Optical imaging of intrinsic signal; Physiological oscillations; Separation of arteries and veins

Indexed keywords

AUTOMATED METHODS; CENTERLINES; CEREBRAL CORTEX; DISCRETE FREQUENCIES; EIGEN FREQUENCIES; FUZZY C MEAN; FUZZY C-MEANS CLUSTERING METHOD; INTRINSIC SIGNAL; MULTITAPER METHODS; OPTICAL IMAGING; PHYSIOLOGICAL OSCILLATIONS; REGION GROWING; RESPIRATION FREQUENCY; SEPARATION METHODS; SPECTRAL AMPLITUDE; SPECTRAL DISTRIBUTION; SPECTRAL POWER; STATISTICAL SIGNIFICANCE; VASCULAR NETWORK; VASCULATURE;

FUZZY CLUSTERING; FUZZY SYSTEMS; IMAGE SEGMENTATION; OPTICAL IMAGE STORAGE;

PHYSIOLOGY;

ALGORITHM; ANIMAL; ARTERY; ARTICLE; AUTOMATED PATTERN RECOGNITION; BRAIN CIRCULATION; BRAIN CORTEX; CLUSTER ANALYSIS; DIAGNOSTIC IMAGING; EYE FUNDUS; FUZZY LOGIC; HISTOLOGY; IMAGE PROCESSING; INSTRUMENTATION; MALE; METHODOLOGY; OPTICS; PHYSIOLOGY; RAT; SPRAGUE DAWLEY RAT; VASCULARIZATION; VEIN;

ALGORITHMS; ANIMALS; ARTERIES; CEREBRAL CORTEX; CEREBROVASCULAR CIRCULATION; CLUSTER ANALYSIS; DIAGNOSTIC IMAGING; FUNDUS OCULI; FUZZY LOGIC; IMAGE PROCESSING, COMPUTER-ASSISTED; MALE; OPTICS AND PHOTONICS; PATTERN RECOGNITION, AUTOMATED; RATS; RATS, SPRAGUE-DAWLEY; VEINS;

EID: 79958026803     PISSN: 10833668     EISSN: 15602281     Source Type: Journal    
DOI: 10.1117/1.3456371     Document Type: Article

References (42)

1. A. Grinvald, R. D. Frostig, E. Lieke, and R. Hildesheim, "Optical imaging of neuronal activity," Physiol. Rev. 68(4), 1285-1366 (1988).
2. N. Pouratian and A. W. Toga, "Optical imaging based on intrinsic signals," Chapter 5 in Brain Mapping: The Methods, 2nd ed., A. W. Toga and J. C. Mazziotta, Eds., pp. 109-110, Academic Press, San Diego (2002).
3. D. Attwell and C. Iadecola, "The neural basis of functional brain imaging signals," Trends Neurosci. 25(12), 621-625 (2002). (Pubitemid 35356509)
4. A. Devor, A. K. Dunn, M. L. Andermann, I. Ulbert, D. A. Boas, and A. M. Dale, "Coupling of total hemoglobin concentration, oxygenation, and neural activity in rat somatosensory cortex," Neuron 39(2), 353-359 (2003). (Pubitemid 36897555)
5. I. Vanzetta, R. Hildesheim, and A. Grinvald, "Compartment-resolved imaging of activity-dependent dynamics of cortical blood volume and oximetry," J. Neurosci. 25(9), 2233-2244 (2005). (Pubitemid 40322264)
6. P. Li, S. Chen, W. Luo, and Q. Luo, "In vivo optical imaging of intrinsic signal during cortical spreading depression in rats," Progr. Biochem. Biophys. 30(4), 605-611 (2003). (Pubitemid 37159856)
7. K. J. Friston, A. Mechelli, R. Turner, and C. J. Price, "Nonlinear responses in fMRI: The balloon model, volterra kernels, and other hemodynamics," Neuroimage 12(4), 466-477 (2000).
8. Y. Zheng, J. Martindale, D. Johnston, M. Jones, J. Berwick, and J. Mayhew, "A model of the hemodynamic response and oxygen delivery to brain," Neuroimage 16(3), 617-637 (2002). (Pubitemid 34852427)
9. Y. Zheng, D. Johnston, J. Berwick, D. Chen, S. Billings, and J. May- hew, "A three-compartment model of the hemodynamic response and oxygen delivery to brain," Neuroimage 28(4), 925-939 (2005). (Pubitemid 41713627)
10. E. M. C. Hillman, A. Devor, M. B. Bouchard, A. K. Dunn, G. W. Krauss, J. Skoch, B. J. Bacskai, A. M. Dale, and D. A. Boas, "Depthresolved optical imaging and microscopy of vascular compartment dynamics during somatosensory stimulation," Neuroimage 35(1), 89-104 (2007). (Pubitemid 46240938)
11. I. Schiessl, W. Wang, and N. McLoughlin, "Independent components of the haemodynamic response in intrinsic optical imaging," Neuroimage 39(2), 634-646 (2008). (Pubitemid 350117650)
12. H. Cheng, Q. Luo, Q. Liu, Q. Lu, H. Gong, and S. Zeng, "Laser speckle imaging of blood flow in microcirculation," Phys. Med. Biol. 49(7), 1347-1357 (2004). (Pubitemid 38514796)
13. P. Li, S. Ni, L. Zhang, S. Zeng, and Q. Luo, "Imaging cerebral blood flow through the intact rat skull with temporal laser speckle imaging," Opt. Lett. 31(12), 1824-1826 (2006). (Pubitemid 44048916)
14. A. J. Houben, M. C. Canoy, H. A. Paling, P. J. Derhaag, and P. W. de Leeuw, "Quantitative analysis of retinal vascular changes in essential and renovascular hypertension," J. Hypertens. 13(12), 1729-1733 (1995). (Pubitemid 26015806)
15. H. Narasimha-Iyer, M. J. Beach, B. Khoobehi, J. F. Ning, H. Kawano, and B. Roysam, "Algorithms for automated oximetry along the retinal vascular tree from dual-wavelength fundus images," J. Biomed. Opt. 10(5), 054013 (2005).
16. T. Y. Wong, R. Klein, A. R. Sharrett, M. I. Schmidt, J. S. Pankow, D. J. Couper, B. E. K. Klein, L. D. Hubbard, and B. B. Duncan, "Retinal arteriolar narrowing and risk of diabetes mellitus in middle-aged persons," J. Am. Med. Assoc. 287(19), 2528-2533 (2002). (Pubitemid 34517198)
17. J. J. Yu, B. Hung, and H. Sun, "Automatic recognition of retinopathy from retinal images," Proc. Int. Conf. IEEE Engineering Medicine and Biology Society 12(1), 171-173 (1990). (Pubitemid 21732230)
18. K. Akita and H. Kuga, "A computer method of understanding ocular fundus images," Pattern Recogn. 15(6), 431-443 (1982). (Pubitemid 13204898)
19. H. Li, W. Hsu, M. L. Lee, and H. Wang, "A piecewise Gaussian model for profiling and differentiating retinal vessels," in IEEE Intern. Conf. on Image Processing, pp. 14-17, IEEE, Piscataway, NJ (2003).
20. E. Grisan and A. Ruggeri, "A divide et impera strategy for automatic classification of retinal vessel into arteries and veins," in Proc. 25th Annu. Int. Conf. IEEE Engineering Medicine and Biology Society, pp. 890-893, IEEE, Piscataway, NJ (2003).
21. H. Narasimha-Iyer, J. M. Beach, B. Khoobehi, and B. Roysam, "Automatic identification of retinal arteries and veins from dualwavelength images using structural and functional features," IEEE Trans. Biomed. Eng. 54(8), 1427-1435 (2007). (Pubitemid 47076257)
22. T. Lei, J. K. Udupa, P. K. Saha, and D. Odhner, "Artery-vein separation via MRA-An image processing approach," IEEE Trans. Med. Imaging 20(8), 689-703 (2001). (Pubitemid 32813542)
23. J. Svensson, P. Leander, J. H. Maki, F. Stahlberg, and L. E. Olsson, "Separation of arteries and veins using flow-induced phase effects in contrast-enhanced MRA of the lower extremities," Magn. Reson. Imaging 20(1), 49-57 (2002). (Pubitemid 34309131)
24. T. Lei, J. K. Udupa, D. Odhner, L. G. Nyúl, and P. K. Saha, "3DVIEWNIX-AVS: A software package for the separate visualization of arteries and veins in CE-MRA images," Comput. Med. Imaging Graph. 27(5), 351-362 (2003). (Pubitemid 36773631)
25. R. D. Frostig, E. E. Lieke, D. Ts'o, and A. Grinvald, "Cortical functional architecture and local coupling between neuronal activity and the microcirculation revealed by in vivo high-resolution optical imaging of intrinsic signals," Proc. Natl. Acad. Sci. U.S.A. 87(16), 6082-6086 (1990).
26. J. Mayhew, D. Hu, Y. Zheng, S. Askew, Y. Hou, J. Berwick, P. J. Coffey, and N. Brown, "An evaluation of linear model analysis techniques for processing images of microcirculation activity," Neuroimage 7, 49-71 (1998). (Pubitemid 28355039)
27. P. M. Kaskan, H. D. Lu, B. C. Dillenburger, J. H. Kaas, and A. W. Roe, "The organization of orientation-selective, luminance-change and binocular-preference domains in the second (V2) and third (V3) visual areas of new world owl monkeys as revealed by intrinsic signal optical imaging," Cereb. Cortex 19(6), 1394-1407 (2009).
28. P. Li, Q. Luo, W. Luo, S. Chen, H. Cheng, and S. Zeng, "Spatiotemporal characteristics of cerebral blood volume changes in rat somatosensory cortex evoked by sciatic nerve stimulation and obtained by optical imaging," J. Biomed. Opt. 8(4), 629-635 (2003).
29. S. Chen, P. Li, W. Luo, H. Gong, S. Zeng, and Q. Luo, "Time-varying spreading depression waves in rat cortex revealed by optical intrinsic signal imaging," Neurosci. Lett. 396, 132-136 (2006). (Pubitemid 43276427)
30. X. K. Li, T. Fang, J. K. Tyan, and M. Fang, "Method for retinal vessel detection and diameter measurement," Proc. SPIE 5370, 1746-1756 (2004).
31. X. Jiang and D. Mojon, "Adaptive local thresholding by verificationbased multithreshold probing with application to vessel detection in retinal images," IEEE Trans. Pattern Anal. Mach. Intell. 25(1), 131-137 (2003).
32. J. Staal, M. Abramoff, M. Niemeijer, M. Viergever, and B. van Ginneken, "Ridge-based vessel segmentation in color images of the retina," IEEE Trans. Med. Imaging 23(4), 501-509 (2004).
33. M. Martinez-Perez, A. Hughes, S. Thom, A. Bharath, and K. Parker, "Segmentation of blood vessels from red-free and fluorescein retinal images," Med. Image Anal. 11, 47-61 (2007). (Pubitemid 46202206)
34. B. Al-Diri, A. Hunter, and D. Steel, "An active contour model for segmenting and measuring retinal vessels," IEEE Trans. Med. Imaging 28(9), 1488-1497 (2009).
35. M. Sonka, V. Hlavac, and R. Boyle, Image Processing, Analysis, and Machine Vision, 3rd ed., pp. 180-183, 675-677, Cengage- Engineering, Florence, KY (2007).
36. D. J. Thomson, "Spectrum estimation and harmonic analysis," Proc. IEEE 70(9), 1055-1097 (1982).
37. D. J. Thomson, "Jackknifing multitaper spectrum estimates," IEEE Signal Process. Mag. 24(4), 20-30 (2007). (Pubitemid 47316164)
38. H. Obrig, M. Neufang, R. Wenzel, M. Kohl, J. Steinbrink, K. Einhäupl, and A. Villringer, "Spontaneous low frequency oscillations of cerebral hemodynamics and metabolism in human adults," Neuroimage 12(6), 623-639 (2000).
39. J. Mayhew, S. Askew, Y. Zheng, J. Porrill, G. W. M. Westby, P. Redgrave, D. M. Rector, and R. M. Harper, "Cerebral vasomotion: A 0.1-Hz oscillation in reflected light imaging of neural activity," Neuroimage 4(3), 183-193 (1996).
40. I. Vanzetta, G. S. Masson, T. Deneux, and O. Faugeras, "Cerebral blood flow recorded at high sensitivity in two dimensions using high resolution optical imaging," in 3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano, pp. 1264-1267 (2006). (Pubitemid 44732555)
41. S. Theodoridis and K. Koutroumbas, Pattern Recognition, 2nd ed., pp. 500-522, Academic Press, San Diego (2003).
42. S. A. Hojjatoleslami and J. Kittler, "Region growing: A new approach," IEEE Trans. Image Process. 7(7), 1079-1084 (1998). (Pubitemid 128745423)