A Markov random walk under constraint for discovering overlapping communities in complex networks

Journal of Statistical Mechanics: Theory and Experiment

Volumn 2011, Issue 5, 2011, Pages

  Jin, Di ^a   Yang, Bo ^a   Baquero, Carlos ^b   Liu, Dayou ^a   He, Dongxiao ^a   Liu, Jie ^a  

^a JILIN UNIVERSITY   (China)

^b UNIVERSITY OF MINHO   (Portugal)

Author keywords

analysis of algorithms; clustering techniques; network dynamics; networks; random graphs

Indexed keywords

EID: 79958022136     PISSN: 17425468     EISSN: 17425468     Source Type: Journal    
DOI: 10.1088/1742-5468/2011/05/P05031     Document Type: Article

References (38)

1. Girvan M and Newman M E J 2002 Community structure in social and biological networks Proc. Nat. Acad. Sci. 9 7821
2. Frtunato S 2010 Community detection in graphs Phys. Rep. 486 75
3. Palla G, Derenyi I, Farkas I and Vicsek T 2005 Uncovering the overlapping community structures of complex networks in nature and society Nature 435 814
4. Gavin A C, Bosche M and Krause R 2002 Functional organization of the yeast proteome by systematic analysis of protein complexes Nature 415 141
5. Shen H, Cheng X, Cai K and Hu M 2009 Detect overlapping and hierarchical community structure in networks Physica A 388 1706
6. Evans T S 2010 Clique graphs and overlapping communities J. Stat. Mech. P12037
7. Pereira-Leal J B, Enright A J and Ouzounis C A 2004 Detection of functional modules from protein interaction networks Proteins 54 49
8. Evans T S and Lambiotte R 2009 Line graphs, link partitions and overlapping communities Phys. Rev. E 80 016105
9. Evans T S and Lambiotte R 2010 Line graphs of weighted networks for overlapping communities Eur. Phys. J. B 77 265
10. Ahn Y Y, Bagrow J P and Lehmann S 2010 Link communities reveal multiscale complexity in networks Nature 466 761
11. Lancichinetti A, Fortunato S and Kertesz J 2009 Detecting the overlapping and hierarchical community structure in complex networks New J. Phys. 11 033015
12. Lee C, Reid F, McDaid A and Hurley N 2010 Detecting highly overlapping community structure by greedy clique expansion SNA-KDD'10: Proc. 4th Int. Workshop on Social Network Mining and Analysis (Washington, DC: ACM) pp33-42
13. Havemann F, Heinz M, Struck A and Gläser J 2011 Identification of overlapping communities and their hierarchy by locally calculating community-changing resolution levels J. Stat. Mech. P01023
14. van Dongen S 2000 Graph clustering by flow simulation PhD Thesis University of Utrecht, Utrecht, Netherlands
15. Yang B, Cheung W K and Liu J 2007 Community mining from signed social networks IEEE Trans. Knowl. Data Eng. 19 1333
16. Rosvall M and Bergstrom C T 2008 Maps of random walks on complex networks reveal community structure Proc. Nat. Acad. Sci. 105 1118
17. E W, Li T and Vanden-Eijnden E 2008 Optimal partition and effective dynamics of complex networks Proc. Nat. Acad. Sci. 105 7907
18. Steinhaeuser K and Chawla N V 2010 Identifying and evaluating community structure in complex networks Pattern Recognit. Lett. 31 413
19. Esquivel A V and Rosvall M 2011 Compression of flow can reveal overlapping modular organization in networks arXiv:1105.0812v1
20. Kim Y and Jeong H 2011 The map equation for link community arXiv:1105.0257v1
21. Newman M E J, Strogatz S H and Watts D J 2001 Random graphs with arbitrary degree distributions and their applications Phys. Rev. E 64 026118
22. Leskovec J, Lang K J and Mahoney M W 2010 Empirical comparison of algorithms for network community detection WWW'10: Proc. 19th Int. World Wide Web Conf. (Raleigh, NC: ACM) pp631-40
23. Lancichinetti A and Fortunato S 2009 Benchmarks for testing community detection algorithms on directed and weighted graphs with overlapping communities Phys. Rev. E 80 016118
24. Yang B, Liu J and Feng J 2011 On the spectral characterization and scalable mining of network communities IEEE Trans. Knowledge Data Eng. online, doi:10.1109/TKDE.2010.233
25. Xu X, Yuruk N, Feng Z and Schweiger T A J 2007 SCAN: a structural clustering algorithm for networks KDD'07: Proc. 13th ACM SIGKDD Int. Conf. on Knowledge Discovery and Data Mining (New York, NY: ACM) pp824-33 (Pubitemid 350237348)
26. Radicchi F, Castellano C, Cecconi F, Loreto V and Parisi D 2004 Defining and identifying communities in networks Proc. Nat. Acad. Sci. 101 2658
27. Danon L, Duch J, Diaz-Guilera A and Arenas A 2005 Comparing community structure identification J. Stat. Mech. P09008
28. Newman M E J and Girvan M 2004 Finding and evaluating community structure in networks Phys. Rev. E 69 026113
29. Zachary W W 1977 An information flow model for conflict and fission in small groups J. Anthropol. Res. 33 452
30. Lusseau D 2003 The emergent properties of a dolphin social network Proc. Biol. Sci. 270 S186
31. Newman M E J 2006 Modularity and community structure in networks Proc. Nat. Acad. Sci. 103 8577
32. Guimer R, Danon L, Diaz-Guilera A, Giralt F and Arenas A 2003 Self-similar community structure in a network of human interactions Phys. Rev. E 68 065103
33. Capocci A, Rao F and Caldarelli G 2008 Taxonomy and clustering in collaborative systems: the case of the on-line encyclopedia Wikipedia Europhys. Lett. 81 28006
34. Vlasblom J and Wodak S J 2009 Markov clustering versus affinity propagation for the partitioning of protein interaction graphs BMC Bioinformatics 10 99
35. Flake G W, Lawrence S, Giles C L and Coetzee F M 2002 Self-organization and identification of web communities Computer 35 66
36. Ford L R and Fulkerson D R 1956 Maximal flow through a network Can. J. Math. 8 399
37. Costa L F 2004 Hub-based community finding arXiv:cond-mat/0405022
38. Bagrow J P and Bollt E M 2005 Local method for detecting communities Phys. Rev. E 72 046108