A TRAF and TNF receptor-associated protein (TTRAP) in mollusk with endonuclease activity

Developmental and Comparative Immunology

Volumn 35, Issue 8, 2011, Pages 827-834

  Yang, Jialong ^a,b   Qiu, Limei ^a   Wang, Leilei ^a,b   Huang, Mengmeng ^a,b   Wang, Lingling ^a   Zhang, Huan ^a   Song, Linsheng ^a  

^a INSTITUTE OF OCEANOLOGY   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

Chlamys farreri; Endonuclease activity; Innate immunity; TNF receptor signaling pathway; TTRAP

Indexed keywords

BETA GLUCAN; COMPLEMENTARY DNA; ENDONUCLEASE; ESCHERICHIA COLI LIPOPOLYSACCHARIDE; GENOMIC DNA; MAGNESIUM ION; MESSENGER RNA; PEPTIDOGLYCAN; PHOSPHODIESTERASE; POLYPEPTIDE; PROTEIN TTRAP; RECOMBINANT PROTEIN; REGULATOR PROTEIN; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED PROTEIN; UNCLASSIFIED DRUG;

ANIMAL TISSUE; ARTICLE; BACILLUS SUBTILIS; BLOOD CELL; CHLAMYS FARRERI; CONTROLLED STUDY; DOWN REGULATION; ESCHERICHIA COLI; GENE EXPRESSION; GILL; GONAD; KIDNEY PARENCHYMA; MANTLE TISSUE; MOLECULAR WEIGHT; MUSCLE TISSUE; NONHUMAN; OPEN READING FRAME; PHYLOGENETIC TREE; PRIORITY JOURNAL; PROTEIN FAMILY; PROTEIN MOTIF; PROTEIN TERTIARY STRUCTURE; RNA TRANSCRIPTION; SCALLOP; TISSUE TYPES; UPREGULATION;

BACILLUS SUBTILIS; CHLAMYS FARRERI; ESCHERICHIA COLI; PHOS;

EID: 79958002263     PISSN: 0145305X     EISSN: 0145305X     Source Type: Journal    
DOI: 10.1016/j.dci.2011.02.013     Document Type: Article

References (34)

1. Arch R.H., Thompson C.B. 4-1BB and Ox40 are members of a tumor necrosis factor (TNF)-nerve growth factor receptor subfamily that bind TNF receptor-associated factors and activate nuclear factor kappa B. Mol. Cell Biol. 1998, 18(1):558-565.
2. Arnold K., Bordoli L., Kopp J., Schwede T. The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics 2006, 22(2):195-201.
3. Beutler B., Milsark I.W., Cerami A.C. Passive-immunization against cachectin tumor necrosis factor protects mice from lethal effect of endotoxin. Science 1985, 229(4716):869-871.
4. De Zoysa M., Jung S., Lee J. First molluscan TNF-alpha homologue of the TNF superfamily in disk abalone: molecular characterization and expression analysis. Fish Shellfish Immunol. 2009, 26(4):625-631.
5. De Zoysa M., Nikapitiya C., Moon D.O., Whang I., Kim G.Y., Lee J. A novel Fas ligand in mollusk abalone: molecular characterization, immune responses and biological activity of the recombinant protein. Fish Shellfish Immunol. 2009, 27(3):423-432.
6. Dempsey P.W., Doyle S.E., He J.Q., Cheng G. The signaling adaptors and pathways activated by TNF superfamily. Cytokine Growth Factor Rev. 2003, 14(3-4):193-209.
7. Dyrynda E.A., Pipe R.K., Ratcliffe N.A. Host-defense mechanisms in marine invertebrate larvae. Fish Shellfish Immunol. 1995, 5(8):569-580.
8. Esguerra C.V., Nelles L., Vermeire L., Ibrahimi A., Crawford A.D., Derua R., Janssens E., Waelkens E., Carmeliet P., Collen D., Huylebroeck D. Ttrap is an essential modulator of Smad3-dependent Nodal signaling during zebrafish gastrulation and left-right axis determination. Development 2007, 134(24):4381-4393.
9. Hehlgans T., Pfeffer K. The intriguing biology of the tumour necrosis factor/tumour necrosis factor receptor superfamily: players, rules and the games. Immunology 2005, 115(1):1-20.
10. Hofmann K., Tomiuk S., Wolff G., Stoffel W. Cloning and characterization of the mammalian brain-specific, Mg2+ -dependent neutral sphingomyelinase. Proc. Natl. Acad. Sci. U.S.A. 2000, 97(11):5895-5900.
11. Kanda H., Igaki T., Kanuka H., Yagi T., Miura M. Wengen, a member of the Drosophila tumor necrosis factor receptor superfamily, is required for Eiger signaling. J. Biol. Chem. 2002, 277(32):28372-28375.
12. Kauppila S., Maaty W.S.A., Chen P., Tomar R.S., Eby M.T., Chapo J., Chew S., Rathore N., Zachariah S., Sinha S.K., Abrams J.M., Chaudhary P.M. Eiger and its receptor, Wengen, comprise a TNF-like system in Drosophila. Oncogene 2003, 22(31):4860-4867.
13. Kiefer F., Arnold K., Kunzli M., Bordoli L., Schwede T. The SWISS-MODEL repository and associated resources. Nucleic Acids Res. 2009, 37:D387-D392.
14. Ledesma F.C., El Khamisy S.F., Zuma M.C., Osborn K., Caldecott K.W. A human 5'-tyrosyl DNA phosphodiesterase that repairs topoisomerase-mediated DNA damage. Nature 2009, 461(7264):674-U125.
15. Lee H.Y., Youn S.W., Kim J.Y., Park K.W., Hwang C.I., Park W.Y., Oh B.H., Park Y.B., Walsh K., Seo J.S., Kim H.S. FOXO3a turns the tumor necrosis factor receptor signaling towards apoptosis through reciprocal regulation of c-Jun N-terminal kinase and NF-kappa B. Arterioscler. Thromb. Vasc. Biol. 2008, 28(1):112-120.
16. Li L., Qiu L.M., Song L.S., Song X.Y., Zhao J.M., Wang L.L., Mu C.K., Zhang H. First molluscan TNFR homologue in Zhikong scallop: molecular characterization and expression analysis. Fish Shellfish Immunol. 2009, 27(5):625-632.
17. Li L., Zhao J.M., Wang L.L., Qiu L.M., Zhang H., Dong C.H., Cong M., Song L.S. The polymorphism of lysozyme gene in Zhikong scallop (Chlamys farreri) and its association with susceptibility/resistance to Listonella anguillarum. Fish Shellfish Immunol. 2009, 27(2):136-142.
18. Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(T)(-Delta Delta C) method. Methods 2001, 25(4):402-408.
19. Locksley R.M., Killeen N., Lenardo M.J. The TNF and TNF receptor superfamilies: integrating mammalian biology. Cell 2001, 104(4):487-501.
20. Marchler-Bauer A., Bryant S.H. CD-Search: protein domain annotations on the fly. Nucleic Acids Res. 2004, 32:W327-W331.
21. Matsuo Y., Yamada A., Tsukamoto K., Tamura H.O., Ikezawa H., Nakamura H., Nishikawa K. A distant evolutionary relationship between bacterial sphingomyelinase and mammalian DNase I. Protein Sci. 1996, 5(12):2459-2467.
22. Moreno E., Yan M.H., Basler K. Evolution of TNF signaling mechanisms: JNK-dependent apoptosis triggered by Eiger, the Drosophila homolog of the TNF superfamily. Curr. Biol. 2002, 12(14):1263-1268.
23. Mu C.K., Yu Y.D., Zhao J.M., Wang L.L., Song X.Y., Zhang H., Qiu L.M., Song L.S. An inhibitor kappa B homologue from bay scallop Argopecten irradians. Fish Shellfish Immunol. 2010, 28(4):687-694.
24. Pype S., Declercq W., Ibrahimi A., Michiels C., Van Rietschoten J.G.I., Dewulf N., de Boer M., Vandenabeele P., Huylebroeck D., Remacle J.E. TTRAP, a novel protein that associates with CD40, tumor necrosis factor (TNF) receptor-75 and TNF receptor-associated factors (TRAFs), and that inhibits nuclear factor-kappa B activation. J. Biol. Chem. 2000, 275(24):18586-18593.
25. Qiu L.M., Song L.S., Yu Y.D., Zhao J.M., Wang L.L., Zhang Q.C. Identification and expression of TRAF6 (TNF receptor-associated factor 6) gene in Zhikong scallop Chlamys farreri. Fish Shellfish Immunol. 2009, 26(3):359-367.
26. Rodrigues-Lima F., Josephs M., Katan M., Cassinat B. Sequence analysis identifies TTRAP, a protein that associates with CD40 and TNF receptor-associated factors, as a member of a superfamily of divalent cation-dependent phosphodiesterases. Biochem. Biophys. Res. Commun. 2001, 285(5):1274-1279.
27. Smith P.K., Krohn R.I., Hermanson G.T., Mallia A.K., Gartner F.H., Provenzano M.D., Fujimoto E.K., Goeke N.M., Olson B.J., Klenk D.C. Measurement of protein using bicinchoninic acid. Anal. Biochem. 1985, 150(1):76-85.
28. Su J., Qiu L., Li L., Liu L., Wang L., Siva V.S., Yu D., Song L. cDNA cloning and characterization of a new member of the tumor necrosis factor receptor family gene from scallop, Chlamys farreri. Mol. Biol. Rep. 2010.
29. Tomiuk S., Hofmann K., Nix M., Zumbansen M., Stoffel W. Cloned mammalian neutral sphingomyelinase: functions in sphingolipid signaling. Proc. Natl. Acad. Sci. U.S.A. 1998, 95(14):8414.
30. Tracey K.J., Beutler B., Lowry S.F., Merryweather J., Wolpe S., Milsark I.W., Hariri R.J., Fahey T.J., Zentella A., Albert J.D., Shires G.T., Cerami A. Shock and tissue-injury induced by recombinant human cachectin. Science 1986, 234(4775):470-474.
31. Verstrepen L., Carpentier I., Verhelst K., Beyaert R. ABINs: A20 binding inhibitors of NF-kappa B and apoptosis signaling. Biochem. Pharmacol. 2009, 78(2):105-114.
32. Wang L.L., Song L.S., Zhao J.M., Qiu L.M., Zhang H., Xu W., Li H.L., Li C.H., Wu L.T., Guo X.M. Expressed sequence tags from the zhikong scallop (Chlamys farreri): discovery and annotation of host-defense genes. Fish Shellfish Immunol. 2009, 26(5):744-750.
33. Whisstock J.C., Romero S., Gurung R., Nandurkar H., Ooms L.M., Bottomley S.P., Mitchell C.A. The inositol polyphosphate 5-phosphatases and the apurinic/apyrimidinic base excision repair endonucleases share a common mechanism for catalysis. J. Biol. Chem. 2000, 275(47):37055-37061.
34. Yu Y.D., Qiu L.M., Song L.S., Zhao J.M., Ni D.J., Zhang Y., Xu W. Molecular cloning and characterization of a putative lipopolysaccharide-induced TNF-alpha factor (LITAF) gene homologue from Zhikong scallop Chlamys farreri. Fish Shellfish Immunol. 2007, 23(2):419-429.