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Volumn 22, Issue 6, 2011, Pages 829-844

Causality analysis of neural connectivity: Critical examination of existing methods and advances of new methods

Author keywords

Event related potential; Granger or Granger like causality; linear regression model; new causality; power spectrum

Indexed keywords

BRAIN AREAS; CAUSALITY ANALYSIS; DIFFERENT FREQUENCY; EPILEPSY SURGERY; EVENT RELATED POTENTIALS; FREQUENCY DOMAINS; GRANGER CAUSALITY; GRANGER OR GRANGER-LIKE CAUSALITY; INVERSE MATRIX; LINEAR REGRESSION MODELS; NATURAL EXTENSION; NEW CAUSALITY; ONE-EQUATION; PARTIAL INFORMATION; POTENTIAL APPLICATIONS; TIME AND FREQUENCY DOMAINS; TIME DOMAIN; TIME FREQUENCY;

EID: 79957978757     PISSN: 10459227     EISSN: None     Source Type: Journal    
DOI: 10.1109/TNN.2011.2123917     Document Type: Review
Times cited : (60)

References (48)
  • 1
    • 55149125233 scopus 로고    scopus 로고
    • Granger causality
    • A. Seth, "Granger causality," Scholarpedia, vol. 2, no. 7, p. 1667, 2007.
    • (2007) Scholarpedia , vol.2 , Issue.7 , pp. 1667
    • Seth, A.1
  • 2
    • 0028468294 scopus 로고
    • A neural network model of causality
    • Jul.
    • R. Sun, "A neural network model of causality," IEEE Trans. Neural Netw., vol. 5, no. 4, pp. 604-611, Jul. 1994.
    • (1994) IEEE Trans. Neural Netw. , vol.5 , Issue.4 , pp. 604-611
    • Sun, R.1
  • 3
    • 73149088616 scopus 로고    scopus 로고
    • Granger causality versus dynamic Bayesian network inference: A comparative study
    • Apr.
    • C. Zou, K. J. Denby, and J. Feng, "Granger causality versus dynamic Bayesian network inference: A comparative study," BMC Bioinf., vol. 10, no. 1, p. 401, Apr. 2009.
    • (2009) BMC Bioinf. , vol.10 , Issue.1 , pp. 401
    • Zou, C.1    Denby, K.J.2    Feng, J.3
  • 4
    • 0003328102 scopus 로고
    • The theory of prediction
    • E. F. Beckenbach, Ed. New York: McGraw-Hill ch. 8
    • N. Wiener, "The theory of prediction," in Modern Mathematics for Engineers, E. F. Beckenbach, Ed. New York: McGraw-Hill, 1956, ch. 8.
    • (1956) Modern Mathematics for Engineers
    • Wiener, N.1
  • 5
    • 0000351727 scopus 로고
    • Investigating causal relations by econometric models and cross-spectral methods
    • Jul.
    • C. W. J. Granger, "Investigating causal relations by econometric models and cross-spectral methods," Econometrica, vol. 37, no. 3, pp. 424-438, Jul. 1969.
    • (1969) Econometrica , vol.37 , Issue.3 , pp. 424-438
    • Granger, C.W.J.1
  • 6
    • 84889407828 scopus 로고    scopus 로고
    • Granger causality: Basic theory and applications to neuroscience
    • B. Schelter M. Winterhalder, and J. Timmer, Eds. Weinheim, Germany: Wiley-VCH
    • M. Ding, Y. Chen, and S. L. Bressler, "Granger causality: Basic theory and applications to neuroscience," in Handbook of Time Series Analysis, B. Schelter, M. Winterhalder, and J. Timmer, Eds. Weinheim, Germany: Wiley-VCH, 2006, pp. 437-460.
    • (2006) Handbook of Time Series Analysis , pp. 437-460
    • Ding, M.1    Chen, Y.2    Bressler, S.L.3
  • 8
    • 84894912254 scopus 로고
    • Measurement of linear dependence and feedback between multiple time series
    • Jun.
    • J. Geweke, "Measurement of linear dependence and feedback between multiple time series," J. Amer. Stat. Assoc., vol. 77, no. 378, pp. 304-313, Jun. 1982.
    • (1982) J. Amer. Stat. Assoc. , vol.77 , Issue.378 , pp. 304-313
    • Geweke, J.1
  • 9
    • 0037473234 scopus 로고    scopus 로고
    • The use of time-variant EEG Granger causality for inspecting directed interdependencies of neural assemblies
    • DOI 10.1016/S0165-0270(02)00366-7
    • W. Hesse, E. Möller, M. Arnold, and B. Schack, "The use of time-variant EEG Granger causality for inspecting directed interdependen-cies of neural assemblies," J. Neurosci. Methods, vol. 124, no. 1, pp. 27-44, Mar. 2003. (Pubitemid 36315806)
    • (2003) Journal of Neuroscience Methods , vol.124 , Issue.1 , pp. 27-44
    • Hesse, W.1    Moller, E.2    Arnold, M.3    Schack, B.4
  • 10
    • 34247555009 scopus 로고    scopus 로고
    • Functional connections between auditory cortical fields in humans revealed by Granger causality analysis of intra-cranial evoked potentials to sounds: Comparison of two methods
    • DOI 10.1016/j.biosystems.2006.05.018, PII S0303264706002590
    • H. Oya, P. W. F. Poon, J. F. Brugge, R. A. Reale, H. Kawasaki, and I. O. Volkov, "Functional connections between auditory cortical fields in humans revealed by Granger causality analysis of intra-cranial evoked potentials to sounds: Comparison of two methods," Biosystems, vol. 89, nos. 1-3, pp. 198-207, May-Jun. 2007. (Pubitemid 46679120)
    • (2007) BioSystems , vol.89 , Issue.1-3 , pp. 198-207
    • Oya, H.1    Poon, P.W.F.2    Brugge, J.F.3    Reale, R.A.4    Kawasaki, H.5    Volkov, I.O.6    Howard III, M.A.7
  • 11
    • 14244259417 scopus 로고    scopus 로고
    • Mapping directed influence over the brain using Granger causality and fMRI
    • DOI 10.1016/j.neuroimage.2004.11.017
    • A. Roebroeck, E. Formisano, and R. Goebel, "Mapping directed influence over the brain using Granger causality and fMRI," Neuroimage, vol. 25, no. 1, pp. 230-242, Mar. 2005. (Pubitemid 40289151)
    • (2005) NeuroImage , vol.25 , Issue.1 , pp. 230-242
    • Roebroeck, A.1    Formisano, E.2    Goebel, R.3
  • 12
    • 54149117431 scopus 로고    scopus 로고
    • Lexical influences on speech perception: A Granger causality analysis of MEG and EEG source estimates
    • Nov.
    • D. W. Gow, J. A. Segawa, S. Alfhors, and F. H. Lin, "Lexical influences on speech perception: A Granger causality analysis of MEG and EEG source estimates," Neuroimage, vol. 43, no. 3, pp. 614-623, Nov. 2008.
    • (2008) Neuroimage , vol.43 , Issue.3 , pp. 614-623
    • Gow, D.W.1    Segawa, J.A.2    Alfhors, S.3    Lin, F.H.4
  • 13
    • 67349089516 scopus 로고    scopus 로고
    • Parallel versus serial processing dependencies in the perisylvian speech network: A Granger analysis of intracranial EEG data
    • Jul.
    • D. W. Gow, C. J. Keller, E. Eskandar, N. Meng, and S. S. Cash, "Parallel versus serial processing dependencies in the perisylvian speech network: A Granger analysis of intracranial EEG data," Brain Lang., vol. 110, no. 1, pp. 43-48, Jul. 2009.
    • (2009) Brain Lang. , vol.110 , Issue.1 , pp. 43-48
    • Gow, D.W.1    Keller, C.J.2    Eskandar, E.3    Meng, N.4    Cash, S.S.5
  • 14
    • 0035377249 scopus 로고    scopus 로고
    • Partial directed coherence: A new concept in neural structure determination
    • L. A. Baccal and K. Sameshima, "Partial directed coherence: A new concept in neural structure determination," Biol. Cybern., vol. 84, no. 6, pp. 463-474, Jun. 2001. (Pubitemid 33605196)
    • (2001) Biological Cybernetics , vol.84 , Issue.6 , pp. 463-474
    • Baccala, L.A.1    Sameshima, K.2
  • 15
    • 15244362922 scopus 로고    scopus 로고
    • Evaluating frequency-wise directed connectivity of BOLD signals applying relative power contribution with the linear multivariate time-series models
    • DOI 10.1016/j.neuroimage.2004.11.042
    • O. Yamashita, N. Sadato, T. Okada, and T. Ozaki, "Evaluating frequency-wise directed connectivity of BOLD signals applying relative power contribution with the linear multivariate time-series models," Neuroimage, vol. 25, no. 2, pp. 478-490, Apr. 2005. (Pubitemid 40387330)
    • (2005) NeuroImage , vol.25 , Issue.2 , pp. 478-490
    • Yamashita, O.1    Sadato, N.2    Okada, T.3    Ozaki, T.4
  • 16
    • 0035433274 scopus 로고    scopus 로고
    • Evaluating causal relations in neural systems: Granger causality, directed transfer function and statistical assessment of significance
    • DOI 10.1007/s004220000235
    • M. Kaminski, M. Ding, W. Truccolo-Filho, and S. L. Bressler, "Evaluating causal relations in neural systems: Granger causality, directed transfer function and statistical assessment of significance," Biol. Cybern., vol. 85, no. 2, pp. 145-157, Aug. 2001. (Pubitemid 33605209)
    • (2001) Biological Cybernetics , vol.85 , Issue.2 , pp. 145-157
    • Kaminski, M.1    Ding, M.2    Truccolo, W.A.3    Bressler, S.L.4
  • 18
    • 0033190863 scopus 로고    scopus 로고
    • On the directionality of cortical interactions studied by structural analysis of electrophysiological recordings
    • C. Bernasconi and P. Konig, "On the directionality of cortical interactions studied by structural analysis of electrophysiological recordings," Biol. Cybern., vol. 81, no. 3, pp. 199-210, Sep. 1999. (Pubitemid 129538437)
    • (1999) Biological Cybernetics , vol.81 , Issue.3 , pp. 199-210
    • Bernasconi, C.1    Konig, P.2
  • 19
    • 0034637880 scopus 로고    scopus 로고
    • Causal influences in primate cerebral cortex during visual pattern discrimination
    • Sep.
    • H. Liang, M. Ding, R. Nakamura, and S. L. Bressler, "Causal influences in primate cerebral cortex during visual pattern discrimination, " Neuroreport, vol. 11, no. 13, pp. 2875-2880, Sep. 2000.
    • (2000) Neuroreport , vol.11 , Issue.13 , pp. 2875-2880
    • Liang, H.1    Ding, M.2    Nakamura, R.3    Bressler, S.L.4
  • 21
    • 59949097639 scopus 로고    scopus 로고
    • Frequency domain connectivity identification: An application of partial directed coherence in fMRI
    • Feb.
    • J. R. Sato, D. Y. Takahashi, S. M. Arcuri, K. Sameshima, P. A. Moret-tin, and L. A. Baccal, "Frequency domain connectivity identification: An application of partial directed coherence in fMRI," Human Brain Mapp., vol. 30, no. 2, pp. 452-461, Feb. 2009.
    • (2009) Human Brain Mapp. , vol.30 , Issue.2 , pp. 452-461
    • Sato, J.R.1    Takahashi, D.Y.2    Arcuri, S.M.3    Sameshima, K.4    Moret-Tin, P.A.5    Baccal, L.A.6
  • 22
    • 20544440613 scopus 로고    scopus 로고
    • Causal influence: Advances in neurosignal analysis
    • DOI 10.1615/CritRevBiomedEng.v33.i4.20
    • M. Kaminski and H. Liang, "Causal influence: Advances in neurosig-nal analysis," Crit. Rev. Biomed. Eng., vol. 33, no. 4, pp. 347-430, 2005. (Pubitemid 40846444)
    • (2005) Critical Reviews in Biomedical Engineering , vol.33 , Issue.4 , pp. 347-430
    • Kaminski, M.1    Liang, H.2
  • 23
    • 44949262939 scopus 로고    scopus 로고
    • Uncovering interactions in the frequency domain
    • S. Guo, J. Wu, M. Ding, and J. Feng, "Uncovering interactions in the frequency domain," PLoS Comput. Biol., vol. 4, no. 5, pp. e1000087-1-e1000087-5, 2008.
    • (2008) PLoS Comput. Biol. , vol.4 , Issue.5
    • Guo, S.1    Wu, J.2    Ding, M.3    Feng, J.4
  • 24
    • 84950949120 scopus 로고
    • Measures of conditional linear dependence and feedback between time series
    • Dec.
    • J. F. Geweke, "Measures of conditional linear dependence and feedback between time series," J. Amer. Stat. Assoc., vol. 79, no. 388, pp. 907-915, Dec. 1984.
    • (1984) J. Amer. Stat. Assoc. , vol.79 , Issue.388 , pp. 907-915
    • Geweke, J.F.1
  • 25
    • 33645342438 scopus 로고    scopus 로고
    • Granger causality and information flow in multivariate processes
    • Nov.
    • K. J. Blinowska, R. Kus, and M. Kaminski, "Granger causality and information flow in multivariate processes," Phys. Rev. E, vol. 70, no. 5, pp. 050902(R)-1-050902(R)-4, Nov. 2004.
    • (2004) Phys. Rev. e , vol.70 , Issue.5
    • Blinowska, K.J.1    Kus, R.2    Kaminski, M.3
  • 26
    • 4143086938 scopus 로고    scopus 로고
    • Determination of EEG activity propagation: Pair-wise versus multichannel estimate
    • DOI 10.1109/TBME.2004.827929
    • R. Kus, M. Kaminski, and K. J. Blinowska, "Determination of EEG activity propagation: Pair-wise versus multichannel estimate," IEEE Trans. Biomed. Eng., vol. 51, no. 9, pp. 1501-1510, Sep. 2004. (Pubitemid 39100223)
    • (2004) IEEE Transactions on Biomedical Engineering , vol.51 , Issue.9 , pp. 1501-1510
    • Kus, R.1    Kaminski, M.2    Blinowska, K.J.3
  • 27
    • 53249113374 scopus 로고    scopus 로고
    • BSMART: A MATLAB/C measurebox for analysis of multichannel neural time series
    • Oct.
    • J. Cui, L. Xu, S. L. Bressler, M. Ding, and H. Liang, "BSMART: A MATLAB/C measurebox for analysis of multichannel neural time series," Neural Netw., Spec. Issue Neuroinf., vol. 21, no. 8, pp. 1094-1104, Oct. 2008.
    • (2008) Neural Netw., Spec. Issue Neuroinf. , vol.21 , Issue.8 , pp. 1094-1104
    • Cui, J.1    Xu, L.2    Bressler, S.L.3    Ding, M.4    Liang, H.5
  • 30
    • 61649124007 scopus 로고    scopus 로고
    • Assessing the strength of directed influences among neural signals using renormalized partial directed coherence
    • Apr.
    • B. Schelter, J. Timmer, and M. Eichler, "Assessing the strength of directed influences among neural signals using renormalized partial directed coherence," J. Neurosci. Methods, vol. 179, no. 1, pp. 121-130, Apr. 2009.
    • (2009) J. Neurosci. Methods , vol.179 , Issue.1 , pp. 121-130
    • Schelter, B.1    Timmer, J.2    Eichler, M.3
  • 32
    • 84889444756 scopus 로고    scopus 로고
    • Computer intensive testing for the influence between time series
    • Berlin, Germany: Wiley-VCH
    • L. A. Baccal, Y. D. Takahashi, and K. Sameshima, "Computer intensive testing for the influence between time series," in Handbook of Time Series Analysis. Berlin, Germany: Wiley-VCH, 2006, pp. 365-388.
    • (2006) Handbook of Time Series Analysis , pp. 365-388
    • Baccal, L.A.1    Takahashi, Y.D.2    Sameshima, K.3
  • 33
    • 15244347318 scopus 로고    scopus 로고
    • Power contribution analysis for multivariate time series with correlated noise sources
    • Y. Tanokura and G. Kitagawa, "Power contribution analysis for multivariate time series with correlated noise sources," Adv. Appl. Stat., vol. 4, no. 1, pp. 65-95, 2004.
    • (2004) Adv. Appl. Stat. , vol.4 , Issue.1 , pp. 65-95
    • Tanokura, Y.1    Kitagawa, G.2
  • 34
    • 0037563249 scopus 로고    scopus 로고
    • Determination of information flow direction among brain structures by a modified directed transfer function (dDTF) method
    • DOI 10.1016/S0165-0270(03)00052-9
    • A. Korzeniewska, M. Mańczak, M. Kamiński, K. J. Blinowska, and S. Kasicki, "Determination of information flow direction among brain structures by a modified directed transfer function (dDTF) method," J. Neurosci. Methods, vol. 125, nos. 1-2, pp. 195-207, May 2003. (Pubitemid 36579348)
    • (2003) Journal of Neuroscience Methods , vol.125 , Issue.1-2 , pp. 195-207
    • Korzeniewska, A.1    Manczak, M.2    Kaminski, M.3    Blinowska, K.J.4    Kasicki, S.5
  • 36
    • 77956690407 scopus 로고    scopus 로고
    • On the recording reference contribution to EEG correlation, phase synchorony, and coherence
    • Oct.
    • S. Hu, M. Stead, Q. Dai, and G. Worrell, "On the recording reference contribution to EEG correlation, phase synchorony, and coherence," IEEE Trans. Syst., Man, Cybern., Part B: Cybern., vol. 40, no. 5, pp. 1294-1304, Oct. 2010.
    • (2010) IEEE Trans. Syst., Man, Cybern., Part B: Cybern. , vol.40 , Issue.5 , pp. 1294-1304
    • Hu, S.1    Stead, M.2    Dai, Q.3    Worrell, G.4
  • 37
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Dec.
    • H. Akaike, "A new look at the statistical model identification, " IEEE Trans. Autom. Control, vol. 19, no. 6, pp. 716-723, Dec. 1974.
    • (1974) IEEE Trans. Autom. Control , vol.19 , Issue.6 , pp. 716-723
    • Akaike, H.1
  • 38
    • 33846036765 scopus 로고    scopus 로고
    • The AIC criterion and symmetrizing the Kullback-Leibler divergence
    • DOI 10.1109/TNN.2006.882813
    • A.-K. Seghouane and S.-I. Amari, "The AIC criterion and symmetrizing the Kullback-Leibler divergence," IEEE Trans. Neural Netw., vol. 18, no. 1, pp. 97-106, Jan. 2007. (Pubitemid 46062919)
    • (2007) IEEE Transactions on Neural Networks , vol.18 , Issue.1 , pp. 97-106
    • Seghouane, A.-K.1    Amari, S.-I.2
  • 39
    • 68949211719 scopus 로고    scopus 로고
    • Model selection criteria for image restoration
    • Aug.
    • A.-K. Seghouane, "Model selection criteria for image restoration," IEEE Trans. Neural Netw., vol. 20, no. 8, pp. 1357-1363, Aug. 2009.
    • (2009) IEEE Trans. Neural Netw. , vol.20 , Issue.8 , pp. 1357-1363
    • Seghouane, A.-K.1
  • 40
    • 77955628382 scopus 로고    scopus 로고
    • Theta oscillations mediate interaction between prefrontal cortex and medial temporal lobe in human memory
    • Jul.
    • K. L. Anderson, R. Rajagovindan, G. A. Ghacibeh, K. J. Meador, and M. Ding, "Theta oscillations mediate interaction between prefrontal cortex and medial temporal lobe in human memory," Cereb. Cortex, vol. 20, no. 7, pp. 1604-1612, Jul. 2010.
    • (2010) Cereb. Cortex , vol.20 , Issue.7 , pp. 1604-1612
    • Anderson, K.L.1    Rajagovindan, R.2    Ghacibeh, G.A.3    Meador, K.J.4    Ding, M.5
  • 41
    • 30844469765 scopus 로고    scopus 로고
    • The brain basis for episodic memory: Insights from functional MRI, intracranial EEG, and patients with epilepsy
    • DOI 10.1016/j.yebeh.2005.09.009, PII S1525505005003641
    • D. Y. Hwanga and A. J. Golby, "The brain basis for episodic memory: Insights from functional MRI, intracranial EEG, and patients with epilepsy," Epil. Behav., vol. 8, no. 1, pp. 115-126, Feb. 2006. (Pubitemid 43103839)
    • (2006) Epilepsy and Behavior , vol.8 , Issue.1 , pp. 115-126
    • Hwang, D.Y.1    Golby, A.J.2
  • 43
    • 0242332248 scopus 로고    scopus 로고
    • The role of theta-range oscillations in synchronising and integrating activity in distributed mnemonic networks
    • I. J. Kirk and J. C. Mackay, "The role of theta-range oscillations in synchronising and integrating activity in distributed mnemonic networks," Cortex, vol. 39, no. 4, pp. 993-1008, Mar. 2003. (Pubitemid 37351078)
    • (2003) Cortex , vol.39 , Issue.4-5 , pp. 993-1008
    • Kirk, I.J.1    Mackay, J.C.2
  • 44
    • 40549130393 scopus 로고    scopus 로고
    • A neural network method for detection of obstructive sleep apnea and narcolepsy based on pupil size and EEG
    • DOI 10.1109/TNN.2007.908634
    • D. Liu, Z. Pang, and S. R. Lloyd, "A neural network method for detection of obstructive sleep apnea and narcolepsy based on pupil size and EEG," IEEE Trans. Neural Netw., vol. 19, no. 2, pp. 308-318, Feb. 2008. (Pubitemid 351359295)
    • (2008) IEEE Transactions on Neural Networks , vol.19 , Issue.2 , pp. 308-318
    • Liu, D.1    Pang, Z.2    Lloyd, S.R.3
  • 45
    • 27644588427 scopus 로고    scopus 로고
    • Theta rhythm of navigation: Link between path integration and landmark navigation, episodic and semantic memory
    • DOI 10.1002/hipo.20113
    • G. Buzsaki, "Theta rhythm of navigation: Link between path integration and landmark navigation, episodic and semantic memory," Hippocampus, vol. 15, no. 7, pp. 827-840, 2005. (Pubitemid 41556413)
    • (2005) Hippocampus , vol.15 , Issue.7 , pp. 827-840
    • Buzsaki, G.1
  • 46
    • 32544442420 scopus 로고    scopus 로고
    • Theta oscillations in human cortex during a working-memory task: Evidence for local generators
    • Mar.
    • S. Raghavachari, J. Lisman, M. Tully, J. Madsen, E. Bromfield, and M. Kahana, "Theta oscillations in human cortex during a working-memory task: Evidence for local generators," J. Neurophysiol., vol. 95, no. 3, pp. 1630-1638, Mar. 2006.
    • (2006) J. Neurophysiol. , vol.95 , Issue.3 , pp. 1630-1638
    • Raghavachari, S.1    Lisman, J.2    Tully, M.3    Madsen, J.4    Bromfield, E.5    Kahana, M.6
  • 47
    • 0032215188 scopus 로고    scopus 로고
    • Coordinated interactions between hippocampal ripples and cortical spindles during slow-wave sleep
    • DOI 10.1016/S0896-6273(00)80629-7
    • A. G. Siapas and M. A. Wilson, "Coordinated interactions between hippocampal ripples and cortical spindles during slow-wave sleep," Neuron, vol. 21, no. 5, pp. 1123-1128, Nov. 1998. (Pubitemid 29018081)
    • (1998) Neuron , vol.21 , Issue.5 , pp. 1123-1128
    • Siapas, A.G.1    Wilson, M.A.2
  • 48
    • 34347265293 scopus 로고    scopus 로고
    • Directionality of coupling from bivariate time series: How to avoid false causalities and missed connections
    • May
    • M. Palus and M. Vejmelka, "Directionality of coupling from bivariate time series: How to avoid false causalities and missed connections," Phys. Rev. E, vol. 75, no. 5, pp. 056211-1-056211-14, May 2007.
    • (2007) Phys. Rev. e , vol.75 , Issue.5 , pp. 0562111-05621114
    • Palus, M.1    Vejmelka, M.2


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