-
1
-
-
0030003893
-
Ultrastructural and biochemical characterization of autophagy in higher plant cells subjected tocarbondeprivation: Controlby the supplyof mitochondriawith respiratory substrates
-
Aubert S, Gout E, Bligny R, Marty-Mazars D, Barrieu F, Alabouvette J, Marty F, Douce R (1996) Ultrastructural and biochemical characterization of autophagy in higher plant cells subjected tocarbondeprivation: controlby the supplyof mitochondriawith respiratory substrates. JCell Biol 133:1251–1263.
-
(1996)
Jcell Biol
, vol.133
, pp. 1251-1263
-
-
Aubert, S.1
Gout, E.2
Bligny, R.3
Marty-Mazars, D.4
Barrieu, F.5
Alabouvette, J.6
Marty, F.7
Douce, R.8
-
2
-
-
0028230738
-
Ultrastructural analysis of the autophagic process in yeast: Detection of autophagosomes and their characterization
-
Baba M, Takeshige K, Baba N, Ohsumi Y (1994) Ultrastructural analysis of the autophagic process in yeast: detection of autophagosomes and their characterization. J Cell Biol 124:903–913.
-
(1994)
J Cell Biol
, vol.124
, pp. 903-913
-
-
Baba, M.1
Takeshige, K.2
Baba, N.3
Ohsumi, Y.4
-
3
-
-
33644583039
-
Yoshimoto K(2006)Autophagy in development and stress responses of plants
-
Bassham DC, Laporte M, Marty F, Moriyasu Y, Ohsumi Y, Olsen LJ, Yoshimoto K(2006)Autophagy in development and stress responses of plants. Autophagy 2:2–11.
-
Autophagy
, vol.2
, pp. 2-11
-
-
Bassham, D.C.1
Laporte, M.2
Marty, F.3
Moriyasu, Y.4
Ohsumi, Y.5
Olsen, L.J.6
-
4
-
-
0028180895
-
Expression of alpha-amylases, carbohydrate metabolism, and autophagy in cultured rice cells is coordinately regulated by sugar nutrient
-
Chen MH, Liu LF, Chen YR, Wu HK, Yu SM (1994) Expression of alpha-amylases, carbohydrate metabolism, and autophagy in cultured rice cells is coordinately regulated by sugar nutrient. Plant J 6:625–636.
-
(1994)
Plant J
, vol.6
, pp. 625-636
-
-
Chen, M.H.1
Liu, L.F.2
Chen, Y.R.3
Wu, H.K.4
Yu, S.M.5
-
5
-
-
0141976351
-
Exclusion of ribulose-1,5-bisphosphate carboxylase/oxygenase from chloroplasts by specific bodies in naturally senescing leaves of wheat
-
Chiba A, Ishida H, Nishizawa NK, Makino A, Mae T (2003) Exclusion of ribulose-1,5-bisphosphate carboxylase/oxygenase from chloroplasts by specific bodies in naturally senescing leaves of wheat. Plant Cell Physiol 44:914–921.
-
(2003)
Plant Cell Physiol
, vol.44
, pp. 914-921
-
-
Chiba, A.1
Ishida, H.2
Nishizawa, N.K.3
Makino, A.4
Mae, T.5
-
6
-
-
0037031843
-
The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana
-
Doelling JH, Walker JM, Friedman EM, Thompson AR, Vierstra RD (2002) The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana. J Biol Chem 277:33105–33114.
-
(2002)
J Biol Chem
, vol.277
, pp. 33105-33114
-
-
Doelling, J.H.1
Walker, J.M.2
Friedman, E.M.3
Thompson, A.R.4
Vierstra, R.D.5
-
7
-
-
0037336295
-
Quality control in the endoplasmic reticulum
-
Ellgaard L, Helenius A (2003) Quality control in the endoplasmic reticulum. Nat Rev Mol Cell Biol 4:181–191.
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 181-191
-
-
Ellgaard, L.1
Helenius, A.2
-
8
-
-
0031080071
-
The Cterminal HDEL sequence is sufficient for retention of secretory proteins in the endoplasmic reticulum (ER) but promotes vacuolar targeting of proteins that escape the ER
-
Gomord V, Denmat LA, Fitchette-Laine AC, Satiat-Jeunemaitre B, Hawes C, Faye L (1997) The Cterminal HDEL sequence is sufficient for retention of secretory proteins in the endoplasmic reticulum (ER) but promotes vacuolar targeting of proteins that escape the ER. Plant J 11:313–325.
-
(1997)
Plant J
, vol.11
, pp. 313-325
-
-
Gomord, V.1
Denmat, L.A.2
Fitchette-Laine, A.C.3
Satiat-Jeunemaitre, B.4
Hawes, C.5
Faye, L.6
-
9
-
-
0035983934
-
Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene
-
Hanaoka H, Noda T, Shirano Y, Kato T, Hayashi H, Shibata D, Tabata S, Ohsumi Y (2002) Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene. Plant Physiol 129:1181–1193.
-
(2002)
Plant Physiol
, vol.129
, pp. 1181-1193
-
-
Hanaoka, H.1
Noda, T.2
Shirano, Y.3
Kato, T.4
Hayashi, H.5
Shibata, D.6
Tabata, S.7
Ohsumi, Y.8
-
10
-
-
0032583163
-
Integral membrane protein sorting to vacuoles in plant cells: Evidence for two pathways
-
Jiang L, Rogers JC (1998) Integral membrane protein sorting to vacuoles in plant cells: evidence for two pathways. J Cell Biol 143:1183–1199.
-
(1998)
J Cell Biol
, vol.143
, pp. 1183-1199
-
-
Jiang, L.1
Rogers, J.C.2
-
11
-
-
0032576605
-
Aggresomes: A cellular response to misfolded proteins
-
Johnston JA, Ward CL, Kopito RR (1998) Aggresomes: a cellular response to misfolded proteins. J Cell Biol 143:1883–1898.
-
(1998)
J Cell Biol
, vol.143
, pp. 1883-1898
-
-
Johnston, J.A.1
Ward, C.L.2
Kopito, R.R.3
-
12
-
-
3242888703
-
LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation
-
Kabeya Y, Mizushima N, Yamamoto A, Oshitani-Okamoto S, Ohsumi Y, Yoshimori T (2004) LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation. J Cell Sci 117:2805–2812.
-
(2004)
J Cell Sci
, vol.117
, pp. 2805-2812
-
-
Kabeya, Y.1
Mizushima, N.2
Yamamoto, A.3
Oshitani-Okamoto, S.4
Ohsumi, Y.5
Yoshimori, T.6
-
13
-
-
0033791650
-
Autophagy, cytoplasm-to-vacuole targeting pathway, and pexophagy in yeast and mammalian cells
-
Kim J, Klionsky DJ (2000) Autophagy, cytoplasm-to-vacuole targeting pathway, and pexophagy in yeast and mammalian cells. Annu Rev Biochem 69:303–342.
-
(2000)
Annu Rev Biochem
, vol.69
, pp. 303-342
-
-
Kim, J.1
Klionsky, D.J.2
-
14
-
-
0034676037
-
The reversible modification regulates the membrane-binding state ofApg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway
-
Kirisako T, Ichimura Y, Okada H, Kabeya Y, Mizushima N, Yoshimori T, Ohsumi M, Takao T, Noda T, Ohsumi Y (2000) The reversible modification regulates the membrane-binding state ofApg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway. J Cell Biol 151:263–275.
-
(2000)
J Cell Biol
, vol.151
, pp. 263-275
-
-
Kirisako, T.1
Ichimura, Y.2
Okada, H.3
Kabeya, Y.4
Mizushima, N.5
Yoshimori, T.6
Ohsumi, M.7
Takao, T.8
Noda, T.9
Ohsumi, Y.10
-
15
-
-
10744225487
-
A unified nomenclature for yeast autophagyrelated genes
-
Klionsky DJ, Cregg JM, Dunn WA Jr, Emr SD, Sakai Y, Sandoval IV, Sibirny A, Subramani S, Thumm M, Veenhuis M, Ohsumi Y (2003) A unified nomenclature for yeast autophagyrelated genes. Dev Cell 5:539–545.
-
(2003)
Dev Cell
, vol.5
, pp. 539-545
-
-
Klionsky, D.J.1
Cregg, J.M.2
Dunn, W.A.3
Emr, S.D.4
Sakai, Y.5
Sandoval, I.V.6
Sibirny, A.7
Subramani, S.8
Thumm, M.9
Veenhuis, M.10
Ohsumi, Y.11
-
16
-
-
0034578389
-
Aggresomes, inclusion bodies and protein aggregation
-
Kopito RR (2000) Aggresomes, inclusion bodies and protein aggregation. Trends Cell Biol 10:524–530.
-
(2000)
Trends Cell Biol
, vol.10
, pp. 524-530
-
-
Kopito, R.R.1
-
17
-
-
0034278759
-
Aggresomes and Russell bodies. Symptoms of cellular indigestion?
-
Kopito RR, Sitia R (2000) Aggresomes and Russell bodies. Symptoms of cellular indigestion? EMBO Rep 1:225–231.
-
(2000)
EMBO Rep
, vol.1
, pp. 225-231
-
-
Kopito, R.R.1
Sitia, R.2
-
19
-
-
84914811152
-
Protein sorting and protein modification along the secretory pathway in BY-2 cells
-
Nagata T, Hasezawa S, Inze D, Springer, Berlin Heidelberg New York
-
Matsuoka K (2004) Protein sorting and protein modification along the secretory pathway in BY-2 cells. In: Nagata T, Hasezawa S, Inze D (eds) Tobacco BY-2 cells. Biotechnology in Agriculture and Forestry, vol. 53. Springer, Berlin Heidelberg New York, pp 283–301.
-
(2004)
Tobacco BY-2 Cells. Biotechnology in Agriculture and Forestry
, vol.53
, pp. 283-301
-
-
Matsuoka, K.1
-
20
-
-
7944237619
-
A comprehensive gene expression analysis toward the understanding of growth and differentiation of tobacco BY-2 cells
-
Matsuoka K, Demura T, Galis I, Horiguchi T, Sasaki M, Tashiro G, Fukuda H (2004) A comprehensive gene expression analysis toward the understanding of growth and differentiation of tobacco BY-2 cells. Plant Cell Physiol 45:1280–1289.
-
(2004)
Plant Cell Physiol
, vol.45
, pp. 1280-1289
-
-
Matsuoka, K.1
Demura, T.2
Galis, I.3
Horiguchi, T.4
Sasaki, M.5
Tashiro, G.6
Fukuda, H.7
-
21
-
-
0035198068
-
Degradation of ribulose-bisphosphate carboxylase by vacuolar enzymes of senescing French bean leaves: Immunocytochemical and ultrastructural observations
-
Minamikawa T, Toyooka K, Okamoto T, Hara-Nishimura I, Nishimura M (2001) Degradation of ribulose-bisphosphate carboxylase by vacuolar enzymes of senescing French bean leaves: immunocytochemical and ultrastructural observations. Protoplasma 218:144–153.
-
(2001)
Protoplasma
, vol.218
, pp. 144-153
-
-
Minamikawa, T.1
Toyooka, K.2
Okamoto, T.3
Hara-Nishimura, I.4
Nishimura, M.5
-
22
-
-
0033780821
-
Characterization of organelles in the vacuolar-sorting pathway by visualization with GFP in tobacco BY-2 cells
-
Mitsuhashi N, Shimada T, Mano S, Nishimura M, Hara-Nishimura I (2000) Characterization of organelles in the vacuolar-sorting pathway by visualization with GFP in tobacco BY-2 cells. Plant Cell Physiol 41:993–1001.
-
(2000)
Plant Cell Physiol
, vol.41
, pp. 993-1001
-
-
Mitsuhashi, N.1
Shimada, T.2
Mano, S.3
Nishimura, M.4
Hara-Nishimura, I.5
-
25
-
-
0029798980
-
Autophagy in tobacco suspension-cultured cells in response to sucrose starvation
-
Moriyasu Y, Ohsumi Y (1996) Autophagy in tobacco suspension-cultured cells in response to sucrose starvation. Plant Physiol 111:1233–1241.
-
(1996)
Plant Physiol
, vol.111
, pp. 1233-1241
-
-
Moriyasu, Y.1
Ohsumi, Y.2
-
26
-
-
0042284554
-
Alpha tonoplast intrinsic protein is specifically associated with vacuole membrane involved in an autophagic process
-
Moriyasu Y, Hattori M, Jauh GY, Rogers JC (2003) Alpha tonoplast intrinsic protein is specifically associated with vacuole membrane involved in an autophagic process. Plant Cell Physiol 44:795–802.
-
(2003)
Plant Cell Physiol
, vol.44
, pp. 795-802
-
-
Moriyasu, Y.1
Hattori, M.2
Jauh, G.Y.3
Rogers, J.C.4
-
27
-
-
0141964578
-
Modification of a ubiquitin-like protein Paz2 conducted micropexophagy through formation of a novel membrane structure
-
Mukaiyama H, Baba M, Osumi M, Aoyagi S, Kato N, Ohsumi Y, Sakai Y (2004) Modification of a ubiquitin-like protein Paz2 conducted micropexophagy through formation of a novel membrane structure. Mol Biol Cell 15(1):58–70.
-
(2004)
Mol Biol Cell
, vol.15
, Issue.1
, pp. 58-70
-
-
Mukaiyama, H.1
Baba, M.2
Osumi, M.3
Aoyagi, S.4
Kato, N.5
Ohsumi, Y.6
Sakai, Y.7
-
28
-
-
0035286734
-
Molecular dissection of autophagy: Two ubiquitin-like systems
-
Ohsumi Y (2001) Molecular dissection of autophagy: two ubiquitin-like systems. Nat Rev Mol Cell Biol 2:211–216.
-
(2001)
Nat Rev Mol Cell Biol
, vol.2
, pp. 211-216
-
-
Ohsumi, Y.1
-
29
-
-
0041464460
-
C-terminal KDEL sequence of a KDEL-tailed cysteine proteinase (Sulfhydryl-endopeptidase) is involved in formation ofKDEL vesicle and in efficient vacuolar transport of sulfhydryl-endopeptidase
-
Okamoto T, Shimada T, Hara-Nishimura I, Nishimura M, Minamikawa T (2003) C-terminal KDEL sequence of a KDEL-tailed cysteine proteinase (sulfhydryl-endopeptidase) is involved in formation ofKDEL vesicle and in efficient vacuolar transport of sulfhydryl-endopeptidase. Plant Physiol 132:1892–1900.
-
(2003)
Plant Physiol
, vol.132
, pp. 1892-1900
-
-
Okamoto, T.1
Shimada, T.2
Hara-Nishimura, I.3
Nishimura, M.4
Minamikawa, T.5
-
30
-
-
33645997673
-
Selective membrane protein internalization accompanies movement from the endoplasmic reticulum to the protein storage vacuole pathway in Arabidopsis
-
Oufattole M, Park JH, Poxleitner M, Jiang L, Rogers JC (2005) Selective membrane protein internalization accompanies movement from the endoplasmic reticulum to the protein storage vacuole pathway in Arabidopsis. Plant Cell 17:3066–3080.
-
(2005)
Plant Cell
, vol.17
, pp. 3066-3080
-
-
Oufattole, M.1
Park, J.H.2
Poxleitner, M.3
Jiang, L.4
Rogers, J.C.5
-
31
-
-
21844450852
-
Protein sorting to the storage vacuoles of plants: A critical appraisal
-
Robinson DG, Oliviusson P, Hinz G (2005) Protein sorting to the storage vacuoles of plants: a critical appraisal. Traffic 6:615–625.
-
(2005)
Traffic
, vol.6
, pp. 615-625
-
-
Robinson, D.G.1
Oliviusson, P.2
Hinz, G.3
-
32
-
-
8344242220
-
Autophagy in health and disease: A double-edged sword
-
Shintani T, Klionsky DJ (2004) Autophagy in health and disease: a double-edged sword. Science 306:990–995.
-
(2004)
Science
, vol.306
, pp. 990-995
-
-
Shintani, T.1
Klionsky, D.J.2
-
33
-
-
1842767362
-
3-methyladenine inhibits autophagy in tobacco culture cells under sucrose starvation conditions
-
Takatsuka C, Inoue Y, Matsuoka K, Moriyasu Y (2004) 3-methyladenine inhibits autophagy in tobacco culture cells under sucrose starvation conditions. Plant Cell Physiol 45:265–274.
-
(2004)
Plant Cell Physiol
, vol.45
, pp. 265-274
-
-
Takatsuka, C.1
Inoue, Y.2
Matsuoka, K.3
Moriyasu, Y.4
-
34
-
-
0026668042
-
Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction
-
Takeshige K, Baba M, Tsuboi S, Noda T, Ohsumi Y (1992) Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction. J Cell Biol 119:301–311.
-
(1992)
J Cell Biol
, vol.119
, pp. 301-311
-
-
Takeshige, K.1
Baba, M.2
Tsuboi, S.3
Noda, T.4
Ohsumi, Y.5
-
35
-
-
3843103539
-
Endoplasmic reticulum-resident proteins are constitutively transported to vacuoles for degradation
-
Tamura K, Yamada K, Shimada T, Hara-Nishimura I (2004) Endoplasmic reticulum-resident proteins are constitutively transported to vacuoles for degradation. Plant J 39:393–402.
-
(2004)
Plant J
, vol.39
, pp. 393-402
-
-
Tamura, K.1
Yamada, K.2
Shimada, T.3
Hara-Nishimura, I.4
-
36
-
-
14744281878
-
Autophagic recycling: Lessons from yeast help define the process in plants
-
Thompson AR, Vierstra RD (2005) Autophagic recycling: lessons from yeast help define the process in plants. Curr Opin Plant Biol 8:165–173.
-
(2005)
Curr Opin Plant Biol
, vol.8
, pp. 165-173
-
-
Thompson, A.R.1
Vierstra, R.D.2
-
37
-
-
0034614933
-
Mass transport of proform of a KDEL-tailed cysteine proteinase (SH-EP) to protein storage vacuoles by endoplasmic reticulum-derived vesicle is involved in protein mobilization in germinating seeds
-
Toyooka K, Okamoto T, Minamikawa T (2000) Mass transport of proform of a KDEL-tailed cysteine proteinase (SH-EP) to protein storage vacuoles by endoplasmic reticulum-derived vesicle is involved in protein mobilization in germinating seeds. J Cell Biol 148:453–464.
-
(2000)
J Cell Biol
, vol.148
, pp. 453-464
-
-
Toyooka, K.1
Okamoto, T.2
Minamikawa, T.3
-
38
-
-
0035802113
-
Cotyledon cells of Vigna mungo seedlings use at least two distinct autophagic machineries for degradation of starch granules and cellular components
-
Toyooka K, Okamoto T, Minamikawa T (2001) Cotyledon cells of Vigna mungo seedlings use at least two distinct autophagic machineries for degradation of starch granules and cellular components. J Cell Biol 154:973–982.
-
(2001)
J Cell Biol
, vol.154
, pp. 973-982
-
-
Toyooka, K.1
Okamoto, T.2
Minamikawa, T.3
-
39
-
-
33645930028
-
Protein aggregates are transported to vacuoles by macroautophagic mechanism in nutrient-starved plant cells
-
Toyooka K, Moriyasu Y, Goto Y, Takeuchi M, Fukuda H, Matsuoka K (2006) Protein aggregates are transported to vacuoles by macroautophagic mechanism in nutrient-starved plant cells. Autophagy 22:96–106.
-
(2006)
Autophagy
, vol.22
, pp. 96-106
-
-
Toyooka, K.1
Moriyasu, Y.2
Goto, Y.3
Takeuchi, M.4
Fukuda, H.5
Matsuoka, K.6
-
40
-
-
0037712997
-
The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins
-
Vierstra RD (2003) The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins. Trends Plant Sci 8:135–142.
-
(2003)
Trends Plant Sci
, vol.8
, pp. 135-142
-
-
Vierstra, R.D.1
-
41
-
-
19444366819
-
AtATG18a is required for the formation of autophagosomes during nutrient stress and senescence in Arabidopsis thaliana
-
Xiong Y, Contento AL, Bassham DC (2005) AtATG18a is required for the formation of autophagosomes during nutrient stress and senescence in Arabidopsis thaliana. Plant J 42:535–546.
-
(2005)
Plant J
, vol.42
, pp. 535-546
-
-
Xiong, Y.1
Contento, A.L.2
Bassham, D.C.3
-
42
-
-
4344646715
-
Contribution of the plasma membrane and central vacuole in the formation of autolysosomes in cultured tobacco cells
-
Yano K, Matsui S, Tsuchiya T, Maeshima M, Kutsuna N, Hasezawa S, Moriyasu Y (2004) Contribution of the plasma membrane and central vacuole in the formation of autolysosomes in cultured tobacco cells. Plant Cell Physiol 45:951–957.
-
(2004)
Plant Cell Physiol
, vol.45
, pp. 951-957
-
-
Yano, K.1
Matsui, S.2
Tsuchiya, T.3
Maeshima, M.4
Kutsuna, N.5
Hasezawa, S.6
Moriyasu, Y.7
-
43
-
-
14744268915
-
Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy
-
Yoshimoto K, Hanaoka H, Sato S, Kato T, Tabata S, Noda T, Ohsumi Y (2004) Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy. Plant Cell 16:2967–2983.
-
(2004)
Plant Cell
, vol.16
, pp. 2967-2983
-
-
Yoshimoto, K.1
Hanaoka, H.2
Sato, S.3
Kato, T.4
Tabata, S.5
Noda, T.6
Ohsumi, Y.7
|