Bacterial symbiosis forming laminated iron-rich deposits in Okuoku-hachikurou hot spring, Akita Prefecture, Japan

Island Arc

Volumn 20, Issue 2, 2011, Pages 294-304

  Takashima, Chizuru ^a   Okumura, Tomoyo ^b   Nishida, Shin ^b   Koike, Hiroko ^b   Kano, Akihiro ^b  

^a SAGA UNIVERSITY   (Japan)

^b KYUSHU UNIVERSITY   (Japan)

Author keywords

Banded iron formation; Cyanobacteria; Ferrihydrite; Iron oxidizing bacteria; Photosynthesis

Indexed keywords

ARCHEAN; BANDED IRON FORMATION; CYANOBACTERIUM; FERRIHYDRITE; LAMINATION; PHOTOSYNTHESIS; PROTEROZOIC; SCANNING ELECTRON MICROSCOPY; SEDIMENTOLOGY;

BACTERIA (MICROORGANISMS); CYANOBACTERIA; PROTEOBACTERIA;

EID: 79957597521     PISSN: 10384871     EISSN: 14401738     Source Type: Journal    
DOI: 10.1111/j.1440-1738.2011.00768.x     Document Type: Article

References (48)

1. Arp G., Reimer A. & Reitner J. 2001. Photosynthesis-induced biofilm calcification and calcium concentrations in Phanerozoic oceans. Science 292, 1701-4.
2. Basak N. & Das D. 2007. The prospect of purple non-sulfur (PNS) photosynthetic bacteria for hydrogen production: The present state of the art. World Journal of Microbiology and Biotechnology 23, 31-42.
3. Brocks J. J., Logan G. A., Buick R. & Summons R. E. 1999. Archean molecular fossils and the early rise of eukaryotes. Science 285, 1033-6.
4. Brocks J. J., Buick R., Summons R. E. & Logan G. A. 2003. A reconstruction of Archean biological diversity based on molecular fossils from the 2.78 to 2.45 billion-year-old Mount Bruce Supergroup Hamersley Basin, Western Australia. Geochemica et Cosmochimica Acta 67, 4321-35.
5. Chaudhuri S. K., Lack J. G. & Coates J. D. 2001. Biogenic magnetite formation through anaerobic biooxidation of Fe(II). Applied Environmental Microbiology 67, 2844-8.
6. Cloud P. 1973. Paleoecological significance of the banded iron-formation. Economic Geology 68, 1135-43.
7. Delong E. F. 1992. Archaea in coastal marine environments. Proceedings of National Academy of Science of the United States of America 89, 5685-9.
8. Dold B. 2003. Dissolution kinetics of schwertmannite and ferrihydrite in oxidized mine samples and their detection by differential X-ray diffraction (DXRD). Applied Geochemistry 18, 1531-40.
9. Edwards K. J., Rogers D. R., Wirsen C. O. & Mccollom T. M. 2003. Isolation and characterization of novel psychrophilic, neutrophilic, Fe-oxidizing, chemolithoautotrophic α- and γ-proteobacteria from the deep sea. Applied and Environmental Microbiology 69, 2906-13.
10. Edwards K. J., Bach W., Mccollom T. M. & Rogers D. R. 2004. Neutrophilic iron-oxidizing bacteria in the ocean: Their habitats, diversity, and roles in mineral deposition, rock alteration, and biomass production in the deep-sea. Geomicrobiology Journal 21, 393-404.
11. Ehrenreich A. & Widdel F. 1994. Anaerobic oxidation of ferrous iron by purple bacteria, a new type of phototrophic metabolism. Applied and Environmental Microbiology 60, 4517-26.
12. Emerson D. 2000. Microbial oxidation of Fe(II) at circumneutral pH. In Lovley D. R. (ed.) Environmental Microbe-Metal Interactions, pp. 31-52, ASM Press, Washington, D.C.
13. Emerson D. & Moyer C. 1997. Isolation and characterization of novel iron-oxidizing bacteria that grow at circumneutral pH. Applied and Environmental Microbiology 63, 4784-92.
14. Emerson D. & Moyer C. L. 2002. Neutrophilic Fe-oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe oxide deposition. Applied and Environmental Microbiology 68, 3085-93.
15. Emerson D. & Revsbech N. P. 1994. Investigation of an iron oxidizing microbial mat community located near Aarhus, Denmark: Field studies. Applied and Environmental Microbiology 60, 4020-31.
16. Emerson D., Weiss J. V. & Megonigal J. P. 1999. Iron-oxidizing bacteria are associated with ferric hydroxide precipitates (Fe-plaque) on the roots of wetland plants. Applied and Environmental Microbiology 65, 2758-61.
17. Fortin D. & Langley S. 2005. Formation and occurrence of biogenic iron-rich minerals. Earth-Science Reviews 72, 1-19.
18. Goldich S. S. 1973. Ages of Precambrian banded iron-formations. Economic Geology 68, 1126-34.
19. Heising S. & Schink B. 1998. Phototrophic oxidation of ferrous iron by a Rhodomicrobium vannielii strain. Microbiology 144, 2263-9.
20. Heising S., Richter L., Ludwig W. & Schink B. 1999. Chlorobium ferrooxidans sp. nov., a phototrophic green sulphur bacterium that oxidizes ferrous iron in coculture with a 'Geospirillum' sp. Strain. Archives of Microbiology 172, 116-24.
21. 12C ratios of siderite and organic matter of a modern metalliferous hydrothermal sediment and their implications for banded iron formations. Chemical Geology 77, 41-5.
22. Kappler A. & Newman D. K. 2004. Formation of Fe(III)-minerals by Fe(II)-oxidizing photoautotrophic bacteria. Geochimica et Cosmochimica Acta 68, 1217-26.
23. Kappler A., Pasquero C., Konhauser K. O. & Newman D. K. 2005. Deposition of banded iron formations by anoxygenic phototrophic Fe(II)-oxidizing bacteria. Geology 33, 865-8.
24. Kasama T. & Murakami T. 2001. The effect of microorganisms on Fe precipitation rate at neutral pH. Chemical Geology 180, 117-28.
25. Kawamura S. & Fujii K. 1994. Alkalinity and acidity. In The Japan Society for Analytical Chemistry, Hokkaido Branch (ed.) Water Analysis, pp. 162-7, Kagaku Dojin, Kyoto (In Japanese).
26. Kennedy C. B., Scott S. D. & Ferris F. G. 2003. Characterization of bacteriogenic iron oxide deposits from Axial Volcano, Juan de Fuca Ridge, northeast Pacific Ocean. Geomicrobiology Journal 20, 199-214.
27. Komárek J. 2007. Phenotype diversity of the cyanobacterial genus Leptolyngbya in the maritime Antarctic. Polish Polar Research 28, 211-31.
28. Konhauser K. O. 1998. Diversity of bacterial iron mineralization. Earth-Science Reviews 43, 91-121.
29. Konhauser K. O., Hamade T., Raiswell R. etal. 2002. Could bacteria have formed the Precambrian banded iron formation? Geology 30, 1079-82.
30. Little C. T. S., Glynn S. E. J. & Mills R. A. 2004. Four-hundred-and-ninety-million-year record of bacteriogenic iron oxide precipitation sea-floor hydrothermal vents. Geomicrobiology Journal 21, 415-29.
31. Makkar N. S. & Casida L. E. 1987. Cupriavidus necator gen. nov., sp. nov.: A nonobligate bacterial predator of bacteria in soil. International Journal of Systematic Bacteriology 37, 323-6.
32. Pierson B. K. & Parenteau M. N. 2000. Phototrophs in high iron microbial mats: Microstructure of mats in iron-depositing hot springs. FEMS Microbiology Ecology 32, 181-96.
33. Pierson B. K., Parenteau M. N. & Griffin B. M. 1999. Phototrophs in high-iron-concentration microbial mats: Physiological ecology of phototrophs in an iron-depositing hot spring. Applied and Environmental Microbiology 65, 5474-83.
34. Planavsky N., Rouxel O., Bekker A., Shapiro R., Fralick P. & Knudsen A. 2009. Iron-oxidizing microbial ecosystems thrived in late Paleoproterozoic redox-stratified oceans. Earth and Planetary Science Letters 286, 230-42.
35. 2O. Geochimica et Cosmochimica Acta 46, 1011-40.
36. Pohlmann A., Fricke W. F., Reinecke F. etal. 2006. Genome sequence of the bioplastic-producing 'Knallgas' bacterium Ralstonia eutropha H16. Nature Biotechnology 24, 1257-62.
37. Roeselers G., Norris T. B., Castenholz R. W. etal. 2007. Diversity of phototrophic bacteria in microbial mats from Arctic hot springs (Greenland). Environmental Microbiology 9, 26-38.
38. Shimazu M., Yamada K., Narita E. & Igarashi T. 1965. Geology of the Ainai-Kosaka-Oyu areas, Akita Prefecture. Bulletin of the Geological Survey of Japan 16, 22-30 (In Japanese).
39. Shiraishi F., Bissett A., De beer D., Reimer A. & Arp G. 2008. Photosynthesis, respiration and exopolymer calcium-binding in biofilm calcification (Westerhöfer and Dsinschwanger Creek, Germany). Geomicrobiology Journal 25, 83-94.
40. Stott M. B., Crowe M. A., Mountain B. W. etal. 2008. Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand. Environmental Microbiology 10, 2030-41.
41. Straub K. L., Benz M., Schink B. & Widdel F. 1996. Anaerobic, nitrate-dependent microbial oxidation of ferrous iron. Applied and Environmental Microbiology 62, 1458-60.
42. Summons R. E., Jahnke L. L., Hope J. M. & Logan G. A. 1999. 2-Methylhopanoids as biomarkers for cyanobacterial oxygenic photosynthesis. Nature 400, 554-7.
43. Takashima C., Kano A., Naganuma T. & Tazaki K. 2008. Laminated iron texture by iron-oxidizing bacteria in a calcite travertine. Geomicrobiology Journal 25, 193-202.
44. Tamura K., Dudley J., Nei M. & Kumar S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution 24, 1596-9.
45. Vandamme P. & Coenye T. 2004. Taxonomy of the genus Cupriavidus: A tale of lost and found. International Journal of Systematic and Evolutionary Microbiology 54, 2285-9.
46. Weber K. A., Achenbach L. A. & Coates J. D. 2006. Microorganisms pumping iron: Anaerobic microbial iron oxidation and reduction. Nature Reviews Microbiology 4, 752-64.
47. Weiss J. V., Rentz J. A., Plaia T. etal. 2007. Characterization of neutrophilic Fe(II)-oxidizing bacteria isolated from the rhizosphere of wetland plants and description of Ferritrophicum radicicola gen. nov. sp. nov., and Sideroxydans paludicola sp. nov. Geomicrobiology Journal 24, 559-70.
48. Widdel F., Schnell S., Heising S., Ehrenreich A., Assmus B. & Schink B. 1993. Ferrous iron oxidation by anoxygenic phototrophic bacteria. Nature 362, 834-6.