Introgression of qPE9-1 allele, conferring the panicle erectness, leads to the decrease of grain yield per plant in japonica rice (Oryza sativa L.)

Journal of Genetics and Genomics

Volumn 38, Issue 5, 2011, Pages 217-223

  Yi, Xiuhua ^a   Zhang, Zujian ^a   Zeng, Shengyuan ^a   Tian, Chunyan ^a   Peng, Juncheng ^a   Li, Min ^a   Lu, Yue ^a   Meng, Qingcai ^a   Gu, Minghong ^a   Yan, Changjie ^a  

^a YANGZHOU UNIVERSITY   (China)

Author keywords

Erect panicle; Genetic analysis; QPE9 1; Rice

Indexed keywords

GENOMIC DNA; STARCH;

ALLELE; ARTICLE; COOKING; DIFFERENTIAL SCANNING CALORIMETRY; DNA EXTRACTION; EATING; FOOD QUALITY; GENE; GENETIC ANALYSIS; GRAIN YIELD; NONHUMAN; PLANT; PLANT GROWTH; POLYMERASE CHAIN REACTION; QPE9 1 GENE; RICE; THERMODYNAMICS;

ALLELES; COOKING; CROPS, AGRICULTURAL; FLOWERS; GENES, PLANT; HAPLOIDY; HYBRIDIZATION, GENETIC; ORYZA SATIVA;

JAPONICA; ORYZA SATIVA;

EID: 79957555269     PISSN: 16738527     EISSN: 18735533     Source Type: Journal    
DOI: 10.1016/j.jgg.2011.03.011     Document Type: Article

References (28)

1. Cagampang G.B., Perez C.M., Juliano B.O. A gel consistency test for the eating quality of rice. J. Sci. Food Agric. 1973, 24:1589-1594.
2. Chen W.F., Xu Z.J., Zhang W.Z., Zhang L.B., Yang S.R. Creation of new plant type and breeding rice for super high yield. Acta Agron. Sin. 2001, 27:665-672. (in Chinese with an English abstract).
3. Chen W.F., Xu Z.J., Zhang L.B., Zhang W.Z., Ma D.R. Theories and practices of breeding japonica rice for super high yield. Sci. Agric. Sin. 2007, 40:869-874.
4. Chen Y.Z., Wei S.L., Liu C., Zhou W.Y., Ma Z.F., Huang D.H., Liu Y.L., Chen Q., Yang X.Q., Yang L., Bai D.L., Li R.B. Exploitation of molecular markers for erect panicle trait and study on breeding Indica erect panicle varieties in rice. Southwest China J. Agric. Sci. 2008, 21:6-11. (in Chinese with an English abstract).
5. Gao S., Chen W., Zhang B. Studies of erect panicle in rice. J. Jilin Agric. Sci. 1999, 24:12-15. (in Chinese with an English abstract).
6. Ge X.J., Xing Y.Z., Xu C.G., He Y.Q. QTL analysis of cooked rice grain elongation, volume expansion, and water absorption using a recombinant inbred population. Plant Breed 2005, 124:121-126.
7. Han Y.P., Xu M.L., Liu X.Y., Yan C.J., Korban S.S., Chen X.L., Gu M.H. Genes coding for starch branching enzymes are major contributors to starch viscosity characteristics in waxy rice (Oryza sativa L.). Plant Sci. 2004, 166:357-364.
8. Huang X.Z., Qian Q., Liu Z.B., Sun H.Y., He S.Y., Luo D., Xia G.G., Chu C.C., Li J.Y., Fu X.D. Natural variation at the DEP1 locus enhances grain yield in rice. Nat. Genet. 2009, 41:494-497.
9. Juliano B.O. A simplified assay for milled rice amylose. Cereal Sci. Today 1971, 16:334-360.
10. Juliano B.O. Criteria and test for rice grain quality. Rice Chemistry and Technology 1985, 443-513. American Association of Cereal Chemists Inc., St. Paul, MN. B.O. Juliano (Ed.).
11. Kong F.N., Wang J.Y., Zou J.C., Shi L.X., Jin D.M., Xu Z.J., Wang B. Molecular tagging and mapping of the erect panicle gene in rice. Mol. Breed. 2007, 19:297-304.
12. Lv W.Y., Cao P., Shao G.J., Cao B.C. Study on the grain quality of main varieties in Liaoning Province. Liaoning Agric. Sci. 1997, 5:7-11. (in Chinese with an English abstract).
13. Nakamura Y. Towards a better understanding of the metabolic system for amylopection biosynthesis in plants: rice endosperm as a model tissue. Plant Cell Physiol. 2002, 43:718-725.
14. Piao R.H., Jiang W.Z., Ham T.H., Choi M.S., Qiao Y.L., Chu S.H., Park J.H., Woo M.K., Jin Z.X., An G.H., Lee J.H., Koh H.J. Map-based cloning of the ERECT PANICLE 3 gene in rice. Theor. Appl. Genet. 2009, 119:1497-1506.
15. Tan Y.F., Li J.X., Yu S.B., Xing Y.Z., Xu C.G., Zhang Q.F. The three important traits for cooking and eating quality of rice grains are controlled by a single locus in an elite rice hybrid, Shanyou 63. Theor. Appl. Genet. 1999, 99:642-648.
16. Tian Z.X., Qian Q., Liu Q.Q., Yan M.X., Liu X.F., Yan C.J., Liu G.F., Gao Z.Y., Tang S.Z., Zeng D.L., Wang Y.H., Yu J.M., Gu M.H., Li J.Y. Allelic diversity in rice starch biosynthesis pathway leads to a diverse array of rice eating and cooking qualities. Proc. Natl. Acad. Sci. USA 2009, 106:21760-21765.
17. Wang J., Nakazaki T., Chen S., Chen W., Saito H., Tsukiyama T., Okumoto Y., Xu Z., Tanisaka T. Identification and characterization of the erect-pose panicle gene EP conferring high grain yield in rice (Oryza sativa L.). Theor. Appl. Genet. 2009, 119:85-91.
18. Xu D.Y., Zhu Q.S. Research advances on breeding and agronomic characteristics of erect panicle japonica varieties. J. Plant Genet. Resour. 2003, 4:350-354. (in Chinese with an English abstract).
19. Xu D.Y., Fang Z.W., Hu S.Y., Wang X.H., Xu M.Q., Pan Q.M. Analysis of main quality characters and agronomical characters of erect-panicle japonica varieties in Jiangsu Province. J. Plant Genet. Resour. 2004, 5:47-51. (in Chinese with an English abstract).
20. Xu Z.J., Chen W.F., Zhang S.L., Zhang W.Z., Ma D.R., Liu L.X., Zhou S.Q. Differences of panicle trait index among varieties and its relationship with yield and quality of rice in Liaoning. Sci. Agric. Sin. 2005, 38:1926-1930. (in Chinese with an English abstract).
21. Xu Z.J., Chen W.F., Zhang L.B., Yang S.R. Design principles and parameters of rice ideal panicle type. Chin. Sci. Bull. 2005, 50:2253-2256.
22. Yan C.J., Zhou J.H., Yan S., Chen F., Yeboah M., Tang S.Z., Liang G.H., Gu M.H. Identification and characterization of a major QTL responsible for erect panicle trait in japonica rice (Oryza sativa L.). Theor. Appl. Genet. 2007, 115:1093-1100.
23. Yan C.J., Yan S., Yang Y.C., Zeng X.H., Fang Y.W., Zeng S.Y., Tian C.Y., Sun Y.W., Tang S.Z., Gu M.H. Development of gene-tagged markers for quantitative trait loci underlying rice yield components. Euphytica 2009, 169:215-226.
24. Yuan L.P. Hybrid rice breeding for super high yield. Hybrid Rice 1997, 12(6):1-6. (in Chinese with an English abstract).
25. Zhang W.Z., Xu Z.J., Chen W.F., Zhang B.L., Jin X.H., Wu X.D. The research progress on erect panicle type of rice. J. Shenyang Agric. Univ. 2002, 33:471-475. (in Chinese with an English abstract).
26. Zhou W.Y., Bai D.L., Yang X.Q., Li X.Y., Liu Y.F., Chen Y.Z., Wei P.X., Cen X.F., Feng D., Li R.B. Inheritance of erect panicle type and its effect on the agronomic characteristics of indica rice. Guangxi Agric. Sci. 2006, 37:490-493. (in Chinese with an English abstract).
27. Zhou Y., Zhu J.Y., Li Z.Y., Yi C.D., Liu J., Zhang H.G., Tang S.Z., Gu M.H., Liang G.H. Deletion in a quantitative trait gene qPE9-1 associated with panicle erectness improves plant architecture during rice domestication. Genetics 2009, 183:315-324.
28. Zhu K.M., Tang D., Yan C.J., Chi Z.C., Yu H.X., Chen J.M., Liang J.S., Gu M.H., Cheng Z.K. ERECT PANICLE 2 encodes a novel protein that regulates panicle erectness in indica rice. Genetics 2010, 184:343-350.