메뉴 건너뛰기




Volumn 62, Issue 8, 2011, Pages 2571-2583

Search for nodulation-related CLE genes in the genome of Glycine max

Author keywords

Autoregulation of nodulation; CLE peptide; cytokinin; nitrate; nodule primordium

Indexed keywords

CYTOKININ; INDOLEACETIC ACID DERIVATIVE; NITRATE; PEPTIDE; VEGETABLE PROTEIN;

EID: 79957496922     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/erq426     Document Type: Article
Times cited : (26)

References (64)
  • 1
    • 34547132317 scopus 로고    scopus 로고
    • Differential effects of combined N sources on early steps of the Nod factor-dependent transduction pathway in Lotus japonicus
    • DOI 10.1094/MPMI-20-8-0994
    • Barbulova A, Rogato A, D'Apuzzo E, Omrane S, Chiurazzi M. 2007. Differential effects of combined N sources on early steps of the Nod factor-dependent transduction pathway in Lotus japonicus. Molecular Plant-Microbe Interactions 20, 994-1003. (Pubitemid 47105732)
    • (2007) Molecular Plant-Microbe Interactions , vol.20 , Issue.8 , pp. 994-1003
    • Barbulova, A.1    Rogato, A.2    D'Apuzzo, E.3    Omrane, S.4    Chiurazzi, M.5
  • 2
    • 3042521098 scopus 로고    scopus 로고
    • Improved prediction of signal peptides: SignalP 3.0
    • DOI 10.1016/j.jmb.2004.05.028, PII S0022283604005972
    • Bendtsen JD, Nielsen H, von Heijne G, Brunak S. 2004. Improved prediction of signal peptides: SignalP 3.0. Journal of Molecular Biology 340, 783-795. (Pubitemid 38829638)
    • (2004) Journal of Molecular Biology , vol.340 , Issue.4 , pp. 783-795
    • Bendtsen, J.D.1    Nielsen, H.2    Von Heijne, G.3    Brunak, S.4
  • 3
    • 0032820696 scopus 로고    scopus 로고
    • Lipochitin oligosaccharides from Rhizobium leguminosarum bv. viciae reduce auxin transport capacity in Vicia sativa subsp, nigra roots
    • Boot KJM, van Brussel AAN, Tak T, Spaink HP, Kijne JW. 1999. Lipochitin oligosaccharides from Rhizobium leguminosarum bv. viciae reduce auxin transport capacity in Vicia sativa subsp. nigra roots. Molecular Plant-Microbe Interactions 12, 839-844. (Pubitemid 29460114)
    • (1999) Molecular Plant-Microbe Interactions , vol.12 , Issue.10 , pp. 839-844
    • Boot, K.J.M.1    Van Brussel, A.A.N.2    Tak, T.3    Spaink, H.P.4    Kijne, J.W.5
  • 4
    • 0034725925 scopus 로고    scopus 로고
    • Dependence of stem cell fate in Arabidopsis on a feedback loop regulated by CLV3 activity
    • DOI 10.1126/science.289.5479.617
    • Brand U, Fletcher JC, Hobe M, Meyerowitz EM, Simon R. 2000. Dependence of stem cell fate in Arabidopsis on a feedback loop regulated by CLV3 activity. Science 289, 617-619. (Pubitemid 30622065)
    • (2000) Science , vol.289 , Issue.5479 , pp. 617-619
    • Brand, U.1    Fletcher, J.C.2    Hobe, M.3    Meyerowitz, E.M.4    Simon, R.5
  • 5
    • 12044259917 scopus 로고
    • Alfalfa controls nodulation during the onset of Rhizbium-induced cortical cell division
    • Caetano-Anollés G, Gresshoff PM. 1991. Alfalfa controls nodulation during the onset of Rhizobium-induced cortical cell division. Plant Physiology 95, 366-373. (Pubitemid 21913820)
    • (1991) Plant Physiology , vol.95 , Issue.2 , pp. 366-373
    • Caetano-Anolles, G.1    Gresshoff, P.M.2
  • 6
    • 85101047461 scopus 로고
    • A supernodulation and nitrate-tolerant symbiotic (nts) soybean mutant
    • Carroll BJ, McNeil DL, Gresshoff PM. 1985a. A supernodulation and nitrate-tolerant symbiotic (nts) soybean mutant. Plant Physiology 78, 34-40.
    • (1985) Plant Physiology , vol.78 , pp. 34-40
    • Carroll, B.J.1    McNeil, D.L.2    Gresshoff, P.M.3
  • 7
    • 0001543653 scopus 로고
    • Isolation and properties of soybean [Glycine max (L.) Merr.] mutants that nodulate in the presence of high nitrate concentrations
    • Carroll BJ, McNeil DL, Gresshoff PM. 1985b. Isolation and properties of soybean [Glycine max (L.) Merr.] mutants that nodulate in the presence of high nitrate concentrations. Proceedings of the National Academy of Sciences, USA 82, 4162-4166.
    • (1985) Proceedings of the National Academy of Sciences, USA , vol.82 , pp. 4162-4166
    • Carroll, B.J.1    McNeil, D.L.2    Gresshoff, P.M.3
  • 8
    • 0030729445 scopus 로고    scopus 로고
    • The CLAVATA1 gene encodes a putative receptor kinase that controls shoot and floral meristem size in arabidopsis
    • Clark SE, Williams RW, Meyerowitz EM. 1997. The CLAVATA1 gene encodes a putative receptor kinase that controls shoot and floral meristem size in Arabidopsis. Cell 89, 575-585. (Pubitemid 27511768)
    • (1997) Cell , vol.89 , Issue.4 , pp. 575-585
    • Clark, S.E.1    Williams, R.W.2    Meyerowitz, E.M.3
  • 9
    • 79957511940 scopus 로고    scopus 로고
    • De novo organ formation from differentiated cells: Root nodule organogenesis. Science Signaling 1, re11.-1-re11.8
    • Crespi M, Frugier F. 2008. De novo organ formation from differentiated cells: Root nodule organogenesis. Science Signaling 1, re11.-1-re11.8. Erratum Science Signaling 2, er1.
    • (2008) Erratum Science Signaling , vol.2
    • Crespi, M.1    Frugier, F.2
  • 10
    • 3142756502 scopus 로고    scopus 로고
    • Open source clustering software
    • DOI 10.1093/bioinformatics/bth078
    • de Hoon MJL, Imoto S, Nolan J, Miyano S. 2004. Open source clustering software. Bioinformatics 20, 1453-1454. (Pubitemid 38931415)
    • (2004) Bioinformatics , vol.20 , Issue.9 , pp. 1453-1454
    • De Hoon, M.J.L.1    Imoto, S.2    Nolan, J.3    Miyano, S.4
  • 11
    • 0036591494 scopus 로고    scopus 로고
    • Nod factor structures, responses, and perception during initiation of nodule development
    • D'Haeze W, Holsters M. 2002. Nod factor structures, responses, and perception during initiation of nodule development. Glycobiology 12, 79R-105R.
    • (2002) Glycobiology , vol.12
    • D'Haeze, W.1    Holsters, M.2
  • 13
    • 45349111536 scopus 로고
    • Mutagenesis of pea (Pisum sativum L.) and the isolation of mutants for nodulation and nitrogen fixation
    • Duc G, Messager A. 1989. Mutagenesis of pea (Pisum sativum L.) and the isolation of mutants for nodulation and nitrogen fixation. Plant Science 60, 207-213.
    • (1989) Plant Science , vol.60 , pp. 207-213
    • Duc, G.1    Messager, A.2
  • 14
    • 77952988108 scopus 로고    scopus 로고
    • A new generation of homology search tools based on probabilistic inference
    • Eddy SR. 2009. A new generation of homology search tools based on probabilistic inference. Genome Informatics 23, 205-211.
    • (2009) Genome Informatics , vol.23 , pp. 205-211
    • Eddy, S.R.1
  • 15
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • DOI 10.1093/nar/gkh340
    • Edgar RC. 2004. MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32, 1792-1797. (Pubitemid 38832724)
    • (2004) Nucleic Acids Research , vol.32 , Issue.5 , pp. 1792-1797
    • Edgar, R.C.1
  • 16
    • 76449101967 scopus 로고    scopus 로고
    • The PXY-CLE41 receptor ligand pair defines a multifunctional pathway that controls the rate and orientation of vascular cell division
    • Etchells JP, Turner SR. 2010. The PXY-CLE41 receptor ligand pair defines a multifunctional pathway that controls the rate and orientation of vascular cell division. Development 137, 767-774.
    • (2010) Development , vol.137 , pp. 767-774
    • Etchells, J.P.1    Turner, S.R.2
  • 17
    • 0033583173 scopus 로고    scopus 로고
    • Signaling of cell fate decisions by CLAVATA3 in Arabidopsis shoot systems
    • Fletcher JC, Brand U, Running MP, Simon R, Meyerowitz EM. 1999. Signaling of cell fate decisions by CLAVATA3 in Arabidopsis shoot systems. Science 283, 1911-1914.
    • (1999) Science , vol.283 , pp. 1911-1914
    • Fletcher, J.C.1    Brand, U.2    Running, M.P.3    Simon, R.4    Meyerowitz, E.M.5
  • 19
    • 33750972586 scopus 로고    scopus 로고
    • The Medicago truncatula CRE1 cytokinin receptor regulates lateral root development and early symbiotic interaction with Sinorhizobium meliloti
    • DOI 10.1105/tpc.106.043778
    • Gonzalez-Rizzo S, Crespi M, Frugier F. 2006. The Medicago truncatula CRE1 cytokinin receptor regulates lateral root development and early symbiotic interaction with Sinorhizobium meliloti. The Plant Cell 18, 2680-2693. (Pubitemid 44749897)
    • (2006) Plant Cell , vol.18 , Issue.10 , pp. 2680-2693
    • Gonzalez-Rizzo, S.1    Crespi, M.2    Frugier, F.3
  • 20
    • 0003495001 scopus 로고
    • 2nd edn. Commonwealth Bureau of Horticulture and Plantation Crops, Technical Communications, no. 22 Farnham Royal, UK: Commonwealth Agricultural Bureaux
    • Hewitt EJ. 1966. Sand and water culture methods used in the study of plant nutrition, 2nd edn. Commonwealth Bureau of Horticulture and Plantation Crops, Technical Communications, no. 22. Farnham Royal, UK: Commonwealth Agricultural Bureaux.
    • (1966) Sand and Water Culture Methods used in the Study of Plant Nutrition
    • Hewitt, E.J.1
  • 23
    • 33747144246 scopus 로고    scopus 로고
    • Dodeca-CLE as peptides as suppressors of plant stem cell differentiation
    • DOI 10.1126/science.1128436
    • Ito Y, Nakanomyo I, Motose H, Iwamoto K, Sawa S, Dohmae N, Fukuda H. 2006. Dodeca-CLE peptides as suppressors of plant stem cell differentiation. Science 313, 842-845. (Pubitemid 44223354)
    • (2006) Science , vol.313 , Issue.5788 , pp. 842-845
    • Ito, Y.1    Nakanomyo, I.2    Motose, H.3    Iwamoto, K.4    Sawa, S.5    Dohmae, N.6    Fukuda, H.7
  • 24
    • 47149104723 scopus 로고    scopus 로고
    • Validation of internal control for gene expression study in soybean by quantitative real-time PCR
    • Jian B, Liu B, Bi Y, Hou W, Wu C, Han T. 2008. Validation of internal control for gene expression study in soybean by quantitative real-time PCR. BMC Molecular Biology 9, 59.1-59.14.
    • (2008) BMC Molecular Biology , vol.9 , pp. 591-5914
    • Jian, B.1    Liu, B.2    Bi, Y.3    Hou, W.4    Wu, C.5    Han, T.6
  • 26
    • 0001271859 scopus 로고
    • Suppression of nodule development of one side of a split-root system of soybeans caused by prior inoculation of the other side
    • Kosslak RM, Bohlool BB. 1984. Suppression of nodule development of one side of a split-root system of soybeans caused by prior inoculation of the other side. Plant Physiology 75, 125-130.
    • (1984) Plant Physiology , vol.75 , pp. 125-130
    • Kosslak, R.M.1    Bohlool, B.B.2
  • 28
    • 0038531125 scopus 로고    scopus 로고
    • Cell cycle function of a rice B2-type cyclin interacting with a B-type cyclin-dependent kinase
    • DOI 10.1046/j.1365-313X.2003.01736.x
    • Lee J, Das A, Yamaguchi M, Hashimoto J, Tsutsumi N, Uchimiya H, Umeda M. 2003. Cell cycle function of a rice B2-type cyclin interacting with a B-type cyclin-dependent kinase. The Plant Journal 34, 417-425. (Pubitemid 36631874)
    • (2003) Plant Journal , vol.34 , Issue.4 , pp. 417-425
    • Lee, J.1    Das, A.2    Yamaguchi, M.3    Hashimoto, J.4    Tsutsumi, N.5    Uchimiya, H.6    Umeda, M.7
  • 29
    • 67349166479 scopus 로고    scopus 로고
    • Autoregulation of nodulation (AON) in Pisum sativum (pea) involves signalling events associated with both nodule primordia development and nitrogen fixation
    • Li D, Kinkema M, Gresshoff PM. 2009. Autoregulation of nodulation (AON) in Pisum sativum (pea) involves signalling events associated with both nodule primordia development and nitrogen fixation. Journal of Plant Physiology 166, 955-967.
    • (2009) Journal of Plant Physiology , vol.166 , pp. 955-967
    • Li, D.1    Kinkema, M.2    Gresshoff, P.M.3
  • 30
    • 77949336344 scopus 로고    scopus 로고
    • Suppression of hypernodulation in soybean by a leaf-extracted, NARK- and Nod factor-dependent, low molecular mass fraction
    • Lin Y-H, Ferguson BJ, Kereszt A, Gresshoff PM. 2010. Suppression of hypernodulation in soybean by a leaf-extracted, NARK- and Nod factor-dependent, low molecular mass fraction. New Phytologist 185, 1074-1086.
    • (2010) New Phytologist , vol.185 , pp. 1074-1086
    • Lin, Y.-H.1    Ferguson, B.J.2    Kereszt, A.3    Gresshoff, P.M.4
  • 31
    • 66149089596 scopus 로고    scopus 로고
    • Long-distance control of nodulation: Molecules and models
    • Magori S, Kawaguchi M. 2009. Long-distance control of nodulation: Molecules and models. Molecular Cells 27, 129-134.
    • (2009) Molecular Cells , vol.27 , pp. 129-134
    • Magori, S.1    Kawaguchi, M.2
  • 32
    • 0031943767 scopus 로고    scopus 로고
    • Auxin transport inhibition precedes root nodule formation in white clover roots and is regulated by flavonoids and derivatives of chitin oligosaccharides
    • DOI 10.1046/j.1365-313X.1998.00090.x
    • Mathesius U, Schlaman HRM, Spaink HP, Sautter C, Rolfe BG, Djordjevic MA. 1998. Auxin transport inhibition precedes root nodule formation in white clover roots and is regulated by flavonoids and derivatives of chitin oligosaccharides. The Plant Journal 14, 23-34. (Pubitemid 28181337)
    • (1998) Plant Journal , vol.14 , Issue.1 , pp. 23-34
    • Mathesius, U.1    Schlaman, H.R.M.2    Spaink, H.P.3    Sautter, C.4    Rolfe, B.G.5    Djordjevic, M.A.6
  • 34
    • 77955168108 scopus 로고    scopus 로고
    • The roles of different CLE domains in Arabidopsis CLE polypeptide activity and functional specificity
    • Meng L, Ruth KC, Fletcher JC, Feldman L. 2010. The roles of different CLE domains in Arabidopsis CLE polypeptide activity and functional specificity. Molecular Plant 3, 760-772.
    • (2010) Molecular Plant , vol.3 , pp. 760-772
    • Meng, L.1    Ruth, K.C.2    Fletcher, J.C.3    Feldman, L.4
  • 37
    • 33846693324 scopus 로고    scopus 로고
    • A cytokinin perception mutant colonized by Rhizobium in the absence of nodule organogenesis
    • DOI 10.1126/science.1132514
    • Murray JD, Karas BJ, Sato S, Tabata S, Amyot L, Szczyglowski K. 2007. A cytokinin perception mutant colonized by Rhizobium in the absence of nodule organogenesis. Science 315, 101-104. (Pubitemid 46196989)
    • (2007) Science , vol.315 , Issue.5808 , pp. 101-104
    • Murray, J.D.1    Karas, B.J.2    Sato, S.3    Tabata, S.4    Amyot, L.5    Szczyglowski, K.6
  • 39
    • 77956982514 scopus 로고
    • Studies on the physiology of nodule formation. III. Experiments on the excision of root-tips and nodules
    • Nutman PS. 1952. Studies on the physiology of nodule formation. III. Experiments on the excision of root-tips and nodules. Annals of Botany 16, 79-101.
    • (1952) Annals of Botany , vol.16 , pp. 79-101
    • Nutman, P.S.1
  • 41
    • 38349165369 scopus 로고    scopus 로고
    • Arabidopsis CLV3 peptide directly binds CLV1 ectodomain
    • Ogawa M, Shinohara H, Sakagami Y, Matsubayashi Y. 2008. Arabidopsis CLV3 peptide directly binds CLV1 ectodomain. Science 319, 294-294.
    • (2008) Science , vol.319 , pp. 294-294
    • Ogawa, M.1    Shinohara, H.2    Sakagami, Y.3    Matsubayashi, Y.4
  • 43
    • 33344461075 scopus 로고    scopus 로고
    • Klavier (klv), a novel hypernodulation mutant of Lotus japonicus affected in vascular tissue organization and floral induction
    • Oka-Kira E, Tateno K, Miura K-i, et al. 2005. klavier (klv), a novel hypernodulation mutant of Lotus japonicus affected in vascular tissue organization and floral induction. The Plant Journal 44, 505-515.
    • (2005) The Plant Journal , vol.44 , pp. 505-515
    • Oka-Kira, E.1    Tateno, K.2    Miura, K.-I.3
  • 45
    • 44649141367 scopus 로고    scopus 로고
    • Coordinating nodule morphogenesis with rhizobial infection in legumes
    • DOI 10.1146/annurev.arplant.59.032607.092839
    • Oldroyd GED, Downie JA. 2008. Coordinating nodule morphogenesis with rhizobial infection in legumes. Annual Review of Plant Biology 59, 519-546. (Pubitemid 351813041)
    • (2008) Annual Review of Plant Biology , vol.59 , pp. 519-546
    • Oldroyd, G.E.D.1    Downie, J.A.2
  • 48
    • 0000353924 scopus 로고
    • A rapid regulatory response governing nodulation in soybean
    • Pierce M, Bauer WD. 1983. A rapid regulatory response governing nodulation in soybean. Plant Physiology 73, 286-290.
    • (1983) Plant Physiology , vol.73 , pp. 286-290
    • Pierce, M.1    Bauer, W.D.2
  • 49
    • 0030599941 scopus 로고    scopus 로고
    • Developmental mapping of nodulation events in pea (Pisum sativum L.) using supernodulating plant genotypes and bacterial variability reveals both plant and Rhizobium control of nodulation regulation
    • Sagan M, Gresshoff PM. 1996. Developmental mapping of nodulation events in pea (Pisum sativum L.) using supernodulating plant genotypes and bacterial variability reveals both plant and Rhizobium control of nodulation regulation. Plant Science 117, 169-179.
    • (1996) Plant Science , vol.117 , pp. 169-179
    • Sagan, M.1    Gresshoff, P.M.2
  • 50
    • 74549221016 scopus 로고    scopus 로고
    • Genome sequence of the palaeopolyploid soybean
    • Schmutz J, Cannon SB, Schlueter J, et al. 2010. Genome sequence of the palaeopolyploid soybean. Nature 463, 178-183.
    • (2010) Nature , vol.463 , pp. 178-183
    • Schmutz, J.1    Cannon, S.B.2    Schlueter, J.3
  • 51
    • 27144513326 scopus 로고    scopus 로고
    • The Medicago truncatula SUNN gene encodes a CLV1-like leucine-rich repeat receptor kinase that regulates nodule number and root length
    • DOI 10.1007/s11103-005-8102-y
    • Schnabel E, Journet E.-P, de Carvalho-Niebel F, Duc G, Frugoli J. 2005. The Medicago truncatula SUNN gene encodes a CLV1-like leucine-rich repeat receptor kinase that regulates nodule number and root length. Plant Molecular Biology 58, 809-822. (Pubitemid 41486873)
    • (2005) Plant Molecular Biology , vol.58 , Issue.6 , pp. 809-822
    • Schnabel, E.1    Journet, E.-P.2    De Carvalho-Niebel, F.3    Duc, G.4    Frugoli, J.5
  • 52
    • 78249275195 scopus 로고    scopus 로고
    • The lss supernodulation mutant of Medicago truncatula reduces expression of the SUNN gene
    • Schnabel E, Mukherjee A, Smith L, Kassaw T, Long S, Frugoli J. 2010. The lss supernodulation mutant of Medicago truncatula reduces expression of the SUNN gene. Plant Physiology 154, 1390-1402.
    • (2010) Plant Physiology , vol.154 , pp. 1390-1402
    • Schnabel, E.1    Mukherjee, A.2    Smith, L.3    Kassaw, T.4    Long, S.5    Frugoli, J.6
  • 53
  • 54
  • 55
    • 66249102166 scopus 로고    scopus 로고
    • A signaling module controlling the stem cell niche in Arabidopsis root meristems
    • Stahl Y, Wink RH, Ingram GC, Simon R. 2009. A signaling module controlling the stem cell niche in Arabidopsis root meristems. Current Biology 19, 909-914.
    • (2009) Current Biology , vol.19 , pp. 909-914
    • Stahl, Y.1    Wink, R.H.2    Ingram, G.C.3    Simon, R.4
  • 57
    • 0642290868 scopus 로고
    • Inhibition of legume nodule formation and N2 fixation by nitrate
    • Streeter J. 1988. Inhibition of legume nodule formation and N2 fixation by nitrate. CRC Critical Reviews in Plant Sciences 7, 1-23.
    • (1988) CRC Critical Reviews in Plant Sciences , vol.7 , pp. 1-23
    • Streeter, J.1
  • 59
  • 61
    • 33745442543 scopus 로고    scopus 로고
    • Defective long-distance auxin transport regulation in the Medicago truncatula super numeric nodules mutant
    • DOI 10.1104/pp.105.075879
    • van Noorden GE, Ross JJ, Reid JB, Rolfe BG, Mathesius U. 2006. Defective long-distance auxin transport regulation in the Medicago truncatula super numeric nodules mutant. Plant Physiology 140, 1494-1506. (Pubitemid 43956232)
    • (2006) Plant Physiology , vol.140 , Issue.4 , pp. 1494-1506
    • Van Noorden, G.E.1    Ross, J.J.2    Reid, J.B.3    Rolfe, B.G.4    Mathesius, U.5
  • 62
    • 33745783925 scopus 로고    scopus 로고
    • Silencing the flavonoid pathway in Medicago truncatula inhibits root nodule formation and prevents auxin transport regulation by rhizobia
    • DOI 10.1105/tpc.105.038232
    • Wasson AP, Pellerone FI, Mathesius U. 2006. Silencing the flavonoid pathway in Medicago truncatula inhibits root nodule formation and prevents auxin transport regulation by rhizobia. The Plant Cell 18, 1617-1629. (Pubitemid 44025547)
    • (2006) Plant Cell , vol.18 , Issue.7 , pp. 1617-1629
    • Wasson, A.P.1    Pellerone, F.I.2    Mathesius, U.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.