Diffusion tensor MRI with tract-based spatial statistics and histology reveals undiscovered lesioned areas in kainate model of epilepsy in rat

Brain Structure and Function

Volumn 216, Issue 2, 2011, Pages 123-135

  Sierra, Alejandra ^a   Laitinen, Teemu ^a   Lehtimäki, Kimmo ^a   Rieppo, Lassi ^a   Pitkänen, Asla ^a,b   Gröhn, Olli ^a  

^a UNIVERSITY OF EASTERN FINLAND   (Finland)

^b KUOPIO UNIVERSITY HOSPITAL   (Finland)

Author keywords

Anatomics; Animal models; Diffusion tensor imaging; Epilepsy; Histology; Kainic acid; Tract based spatial statistics

Indexed keywords

ANIMAL EXPERIMENT; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; BRAIN REGION; CONTROLLED STUDY; CORPUS CALLOSUM; DENTATE GYRUS; DIFFUSION TENSOR IMAGING; ENTORHINAL CORTEX; EPILEPSY; EXTERNAL CAPSULE; HABENULA; HISTOPATHOLOGY; MALE; NEUROIMAGING; NEUROPATHOLOGY; NONHUMAN; OPTIC TRACT; PRIORITY JOURNAL; RAT; STRIA MEDULLARIS; SUPERIOR COLLICULUS;

ANIMALS; ANISOTROPY; BRAIN; DATA INTERPRETATION, STATISTICAL; DIFFUSION TENSOR IMAGING; EPILEPSY; HISTOLOGICAL TECHNIQUES; KAINIC ACID; MICROSCOPY, POLARIZATION; RATS;

ANIMALIA; RATTUS;

EID: 79956340509     PISSN: 18632653     EISSN: 18632661     Source Type: Journal    
DOI: 10.1007/s00429-010-0299-0     Document Type: Article

References (30)

1. PJ Basser C Pierpaoli 1998 A simplified method to measure the diffusion tensor from seven MR images Magn Reson Med 39 928 934 9621916 10.1002/mrm.1910390610 1:STN:280:DyaK1c3otlagtw%3D%3D (Pubitemid 28237751)
2. PJ Basser J Mattiello D LeBihan 1994 MR diffusion tensor spectroscopy and imaging Biophys J 66 1 259 267 8130344 10.1016/S0006-3495(94)80775-1 1:STN:280:DyaK2c7ns1Kgtw%3D%3D (Pubitemid 24016507)
3. NA Bock NB Konyer RM Henkelman 2003 Multiple-mouse MRI Magn Reson Med 49 158 167 12509832 10.1002/mrm.10326 (Pubitemid 36042346)
4. S Cader H Johansen-Berg M Wylezinska J Palace TE Behrens S Smith PM Matthews 2007 Discordant white matter N-acetylasparate and diffusion MRI measures suggest that chronic metabolic dysfunction contributes to axonal pathology in multiple sclerosis Neuroimage 36 19 27 17398118 10.1016/j.neuroimage.2007.02.036 1:STN:280:DC%2BD2s3ls12qtA%3D%3D (Pubitemid 46617958)
5. O Devinsky R Laff 2003 Callosal lesions and behavior: history and modern concepts Epilepsy Behav 4 607 617 14698693 10.1016/j.yebeh.2003.08.029 (Pubitemid 38035683)
6. G Douaud S Smith M Jenkinson T Behrens H Johansen-Berg J Vickers S James N Voets K Watkins PM Matthews A James 2007 Anatomically related grey and white matter abnormalities in adolescent-onset schizophrenia Brain 130 2375 2386 17698497 10.1093/brain/awm184 (Pubitemid 47327642)
7. F Du T Eid EW Lothman C Kohler R Schwarcz 1995 Preferential neuronal loss in layer III of the medial entorhinal cortex in rat models of temporal lobe epilepsy J.Neurosci 15 6301 6313 7472396 1:CAS:528:DyaK2MXovFWht7k%3D
8. DS Garant K Gale 1987 Substantia nigra-mediated anticonvulsant actions: role of nigral output pathways Exp Neurol 97 143 159 3582559 10.1016/0014-4886(87)90289-5 1:CAS:528:DyaL2sXkvV2ktrk%3D (Pubitemid 17106679)
9. CR Genovese NA Lazar T Nichols 2002 Thresholding of statistical maps in functional neuroimaging using the false discovery rate Neuroimage 15 870 878 11906227 10.1006/nimg.2001.1037 (Pubitemid 34852500)
10. R Guerrini C Marini 2006 Genetic malformations of cortical development Exp Brain Res 173 322 333 16724181 10.1007/s00221-006-0501-z (Pubitemid 44264897)
11. E Hirsch OC Snead M Vergnes F Gilles 1992 Corpus callosotomy in the lithium-pilocarpine model of seizures and status epilepticus Epilepsy Res 11 183 191 1396533 10.1016/0920-1211(92)90097-D 1:CAS:528:DyaK38Xlt12htro%3D
12. KJ Hopkins GJ Wang LC Schmued 2000 Temporal progression of kainic acid induced neuronal and myelin degeneration in the rat forebrain Brain Res 864 1 69 80 10793188 10.1016/S0006-8993(00)02137-5 1:CAS:528:DC%2BD3cXivVGhtrk%3D (Pubitemid 30227599)
13. R Insausti MT Herrero MP Witter 1997 Entorhinal cortex of the rat: cytoarchitectonic subdivisions and the origin and distribution of cortical efferents Hippocampus 7 146 183 9136047 10.1002/(SICI)1098-1063(1997)7:2<146: :AID-HIPO4>3.0.CO;2-L 1:STN:280:DyaK2s3otFOguw%3D%3D (Pubitemid 27192399)
14. M Jenkinson S Smith 2001 A global optimisation method for robust affine registration of brain images Med Image Anal 5 143 156 11516708 10.1016/S1361-8415(01)00036-6 1:STN:280:DC%2BD3MvntVWrtw%3D%3D (Pubitemid 35282800)
15. M Jenkinson P Bannister M Brady S Smith 2002 Improved optimization for the robust and accurate linear registration and motion correction of brain images Neuroimage 17 825 841 12377157 10.1006/nimg.2002.1132 (Pubitemid 35317016)
16. T Laitinen A Sierra A Pitkanen O Grohn 2010 Diffusion tensor MRI of axonal plasticity in the rat hippocampus Neuroimage 51 521 530 20211740 10.1016/j.neuroimage.2010.02.077
17. L Larsen LD Griffin D Grassel OW Witte H Axer 2007 Polarized light imaging of white matter architecture Microsc Res Tech 70 851 863 17661367 10.1002/jemt.20488 (Pubitemid 47549729)
18. J Nairismagi OH Grohn MI Kettunen J Nissinen RA Kauppinen A Pitkanen 2004 Progression of brain damage after status epilepticus and its association with epileptogenesis: a quantitative MRI study in a rat model of temporal lobe epilepsy Epilepsia 45 1024 1034 15329065 10.1111/j.0013-9580.2004.08904.x (Pubitemid 39238111)
19. S Pajevic C Pierpaoli 1999 Color schemes to represent the orientation of anisotropic tissues from diffusion tensor data: application to white matter fiber tract mapping in the human brain Magn Reson Med 42 526 540 10467297 10.1002/(SICI)1522-2594(199909)42:3<526::AID-MRM15>3.0.CO;2-J 1:STN:280:DyaK1MzpvVGltw%3D%3D (Pubitemid 29416214)
20. J Puig S Pedraza G Blasco J Daunis-I-Estadella A Prats F Prados I Boada M Castellanos J Sanchez-Gonzalez S Remollo G Laguillo AM Quiles E Gomez J Serena 2010 Wallerian degeneration in the corticospinal tract evaluated by diffusion tensor imaging correlates with motor deficit 30 days after middle cerebral artery ischemic stroke AJNR Am J Neuroradiol 31 1324 1330 20299434 10.3174/ajnr.A2038
21. J Rieppo J Hallikainen JS Jurvelin I Kiviranta HJ Helminen MM Hyttinen 2008 Practical considerations in the use of polarized light microscopy in the analysis of the collagen network in articular cartilage Microsc Res Tech 71 279 287 18072283 10.1002/jemt.20551 (Pubitemid 351521263)
22. PY Risold LW Swanson 1995 Cajal's nucleus of the stria medullaris: characterization by in situ hybridization and immunohistochemistry for enkephalin J Chem Neuroanat 9 235 240 8719273 10.1016/0891-0618(95)00083-6 1:CAS:528:DyaK28XhtFylsrg%3D (Pubitemid 26011186)
23. JE Schwob T Fuller JL Price JW Olney 1980 Widespread patterns of neuronal damage following systemic or intracerebral injections of kainic acid: a histological study Neuroscience 5 6 991 1014 7402461 10.1016/0306-4522(80)90181- 5 1:CAS:528:DyaL3MXnslKhsQ%3D%3D (Pubitemid 10063400)
24. TM Shepherd E Ozarslan MA King TH Mareci SJ Blackband 2006 Structural insights from high-resolution diffusion tensor imaging and tractography of the isolated rat hippocampus Neuroimage 32 1499 1509 16806988 10.1016/j.neuroimage. 2006.04.210 (Pubitemid 44332273)
25. RS Sloviter 1982 A simplified Timm stain procedure compatible with formaldehyde fixation and routine paraffin embedding of rat brain Brain Res Bull 8 771 774 6182964 10.1016/0361-9230(82)90104-6 1:STN:280:DyaL3s%2FltVWrsQ%3D%3D (Pubitemid 13240618)
26. SM Smith 2002 Fast robust automated brain extraction Hum Brain Mapp 17 143 155 12391568 10.1002/hbm.10062 (Pubitemid 35253488)
27. SM Smith M Jenkinson H Johansen-Berg D Rueckert TE Nichols CE Mackay KE Watkins O Ciccarelli MZ Cader PM Matthews TE Behrens 2006 Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data Neuroimage 31 1487 1505 16624579 10.1016/j.neuroimage.2006.02.024
28. SM Smith H Johansen-Berg M Jenkinson D Rueckert TE Nichols KL Miller MD Robson DK Jones JC Klein AJ Bartsch TE Behrens 2007 Acquisition and voxelwise analysis of multi-subject diffusion data with tract-based spatial statistics Nat Protoc 2 499 503 17406613 10.1038/nprot.2007.45
29. F Tovar-Moll IE Evangelou AW Chiu ND Richert JL Ostuni JM Ohayon S Auh M Ehrmantraut SL Talagala HF McFarland F Bagnato 2009 Thalamic involvement and its impact on clinical disability in patients with multiple sclerosis: a diffusion tensor imaging study at 3T AJNR Am J Neuroradiol 30 1380 1386 19369608 10.3174/ajnr.A1564 1:STN:280:DC%2BD1Mrkt1eqtQ%3D%3D
30. J Zhang PC van Zijl S Mori 2002 Three-dimensional diffusion tensor magnetic resonance microimaging of adult mouse brain and hippocampus Neuroimage 15 892 901 11906229 10.1006/nimg.2001.1012 (Pubitemid 34852502)