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Volumn 11, Issue 5, 2011, Pages 948-954

A limited number of ITS haplotypes defines the diversity of Pneumocystis jirovecii strains in Sweden

Author keywords

Biodiversity; Genotyping; ITS internal transcribed spacer; PCP pneumocystis pneumonia

Indexed keywords

INTERNAL TRANSCRIBED SPACER 1; INTERNAL TRANSCRIBED SPACER 2; RIBOSOME DNA;

EID: 79956332370     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2011.03.004     Document Type: Article
Times cited : (10)

References (24)
  • 2
    • 33947240913 scopus 로고    scopus 로고
    • Frequent in vitro recombination in internal transcribed spacers 1 and 2 during genotyping of Pneumocystis jirovecii
    • Beser J., Hagblom P., Fernandez V. Frequent in vitro recombination in internal transcribed spacers 1 and 2 during genotyping of Pneumocystis jirovecii. J. Clin. Microbiol. 2007, 45:881-886.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 881-886
    • Beser, J.1    Hagblom, P.2    Fernandez, V.3
  • 3
    • 0033771358 scopus 로고    scopus 로고
    • TCS: a computer program to estimate gene genealogies
    • Clement M., Posada D., Crandall K.A. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 2000, 9:1657-1659.
    • (2000) Mol. Ecol. , vol.9 , pp. 1657-1659
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 4
    • 0023676114 scopus 로고
    • Pneumocystis carinii pneumonia: detection of parasites in sputum and bronchoalveolar lavage fluid by monoclonal antibodies
    • Elvin K.M., Bjorkman A., Linder E., Heurlin N., Hjerpe A. Pneumocystis carinii pneumonia: detection of parasites in sputum and bronchoalveolar lavage fluid by monoclonal antibodies. BMJ 1988, 297:381-384.
    • (1988) BMJ , vol.297 , pp. 381-384
    • Elvin, K.M.1    Bjorkman, A.2    Linder, E.3    Heurlin, N.4    Hjerpe, A.5
  • 8
    • 0035930061 scopus 로고    scopus 로고
    • New insights into transmission, diagnosis, and drug treatment of Pneumocystis carinii pneumonia
    • Kovacs J.A., Gill V.J., Meshnick S., Masur H. New insights into transmission, diagnosis, and drug treatment of Pneumocystis carinii pneumonia. JAMA 2001, 286:2450-2460.
    • (2001) JAMA , vol.286 , pp. 2450-2460
    • Kovacs, J.A.1    Gill, V.J.2    Meshnick, S.3    Masur, H.4
  • 10
    • 0028126602 scopus 로고
    • Typing of Pneumocystis carinii strains that infect humans based on nucleotide sequence variations of internal transcribed spacers of rRNA genes
    • Lu J.J., Bartlett M.S., Shaw M.M., Queener S.F., Smith J.W., Ortiz-Rivera M., Leibowitz M.J., Lee C.H. Typing of Pneumocystis carinii strains that infect humans based on nucleotide sequence variations of internal transcribed spacers of rRNA genes. J. Clin. Microbiol. 1994, 32:2904-2912.
    • (1994) J. Clin. Microbiol. , vol.32 , pp. 2904-2912
    • Lu, J.J.1    Bartlett, M.S.2    Shaw, M.M.3    Queener, S.F.4    Smith, J.W.5    Ortiz-Rivera, M.6    Leibowitz, M.J.7    Lee, C.H.8
  • 11
    • 0242558925 scopus 로고    scopus 로고
    • Pneumocystis jiroveci in Portuguese immunocompromised patients: association of specific ITS genotypes with treatment failure, bad clinical outcome and childhood
    • Matos O., Lee C.H., Jin S., Li B., Costa M.C., Goncalves L., Antunes F. Pneumocystis jiroveci in Portuguese immunocompromised patients: association of specific ITS genotypes with treatment failure, bad clinical outcome and childhood. Infect. Genet. Evol. 2003, 3:281-285.
    • (2003) Infect. Genet. Evol. , vol.3 , pp. 281-285
    • Matos, O.1    Lee, C.H.2    Jin, S.3    Li, B.4    Costa, M.C.5    Goncalves, L.6    Antunes, F.7
  • 12
    • 0037231983 scopus 로고    scopus 로고
    • Pneumocystis jiroveci internal transcribed spacer types in patients colonized by the fungus and in patients with pneumocystosis from the same French geographic region
    • Nevez G., Totet A., Jounieaux V., Schmit J.L., Dei-Cas E., Raccurt C. Pneumocystis jiroveci internal transcribed spacer types in patients colonized by the fungus and in patients with pneumocystosis from the same French geographic region. J. Clin. Microbiol. 2003, 41:181-186.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 181-186
    • Nevez, G.1    Totet, A.2    Jounieaux, V.3    Schmit, J.L.4    Dei-Cas, E.5    Raccurt, C.6
  • 13
    • 0036205834 scopus 로고    scopus 로고
    • Genetic diversity of Pneumocystis carinii f. sp. hominis based on variations in nucleotide sequences of internal transcribed spacers of rRNA genes
    • Nimri L.F., Moura I.N., Huang L., del Rio C., Rimland D., Duchin J.S., Dotson E.M., Beard C.B. Genetic diversity of Pneumocystis carinii f. sp. hominis based on variations in nucleotide sequences of internal transcribed spacers of rRNA genes. J. Clin. Microbiol. 2002, 40:1146-1151.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 1146-1151
    • Nimri, L.F.1    Moura, I.N.2    Huang, L.3    del Rio, C.4    Rimland, D.5    Duchin, J.S.6    Dotson, E.M.7    Beard, C.B.8
  • 14
    • 12144270619 scopus 로고    scopus 로고
    • Genotyping and coalescent phylogenetic analysis of Pneumocystis jiroveci from South Africa
    • Robberts F.J., Liebowitz L.D., Chalkley L.J. Genotyping and coalescent phylogenetic analysis of Pneumocystis jiroveci from South Africa. J. Clin. Microbiol. 2004, 42:1505-1510.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 1505-1510
    • Robberts, F.J.1    Liebowitz, L.D.2    Chalkley, L.J.3
  • 15
    • 0037090058 scopus 로고    scopus 로고
    • Opportunistic infections in patients with and patients without Acquired Immunodeficiency Syndrome
    • Sepkowitz K.A. Opportunistic infections in patients with and patients without Acquired Immunodeficiency Syndrome. Clin. Infect. Dis. 2002, 34:1098-1107.
    • (2002) Clin. Infect. Dis. , vol.34 , pp. 1098-1107
    • Sepkowitz, K.A.1
  • 16
    • 84856043672 scopus 로고
    • A mathematical theory of communication
    • Shannon C. A mathematical theory of communication. Bell. Syst. Technol. J. 1948, 27:379-423.
    • (1948) Bell. Syst. Technol. J. , vol.27 , pp. 379-423
    • Shannon, C.1
  • 17
    • 33344464667 scopus 로고
    • Measurment of diversity
    • Simpson E. Measurment of diversity. Nature 1949, 163:688.
    • (1949) Nature , vol.163 , pp. 688
    • Simpson, E.1
  • 18
    • 18644365229 scopus 로고    scopus 로고
    • Genotypic study of Pneumocystis jirovecii in human immunodeficiency virus-positive patients in Thailand
    • Siripattanapipong S., Worapong J., Mungthin M., Leelayoova S., Tan-ariya P. Genotypic study of Pneumocystis jirovecii in human immunodeficiency virus-positive patients in Thailand. J. Clin. Microbiol. 2005, 43:2104-2110.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 2104-2110
    • Siripattanapipong, S.1    Worapong, J.2    Mungthin, M.3    Leelayoova, S.4    Tan-ariya, P.5
  • 19
    • 0035573087 scopus 로고    scopus 로고
    • Pneumocystis carinii: genetic diversity and cell biology
    • Smulian A.G. Pneumocystis carinii: genetic diversity and cell biology. Fungal Genet. Biol. 2001, 34:145-154.
    • (2001) Fungal Genet. Biol. , vol.34 , pp. 145-154
    • Smulian, A.G.1
  • 20
    • 0031850247 scopus 로고    scopus 로고
    • Determination of copy number of rRNA genes in Pneumocystis carinii f. sp. hominis
    • Tang X., Bartlett M.S., Smith J.W., Lu J.J., Lee C.H. Determination of copy number of rRNA genes in Pneumocystis carinii f. sp. hominis. J. Clin. Microbiol. 1998, 36:2491-2494.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 2491-2494
    • Tang, X.1    Bartlett, M.S.2    Smith, J.W.3    Lu, J.J.4    Lee, C.H.5
  • 21
    • 0026662698 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data III. Cladogram estimation
    • Templeton A.R., Crandall K.A., Sing C.F. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data III. Cladogram estimation. Genetics 1992, 132:619-633.
    • (1992) Genetics , vol.132 , pp. 619-633
    • Templeton, A.R.1    Crandall, K.A.2    Sing, C.F.3
  • 22
    • 0345269277 scopus 로고    scopus 로고
    • Genotypes at the internal transcribed spacers of the nuclear rRNA operon of Pneumocystis jiroveci in nonimmunosuppressed infants without severe pneumonia
    • Totet A., Pautard J.C., Raccurt C., Roux P., Nevez G. Genotypes at the internal transcribed spacers of the nuclear rRNA operon of Pneumocystis jiroveci in nonimmunosuppressed infants without severe pneumonia. J. Clin. Microbiol. 2003, 41:1173-1180.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 1173-1180
    • Totet, A.1    Pautard, J.C.2    Raccurt, C.3    Roux, P.4    Nevez, G.5
  • 23
    • 0030017184 scopus 로고    scopus 로고
    • Genetic diversity at the internal transcribed spacer regions of the rRNA operon among isolates of Pneumocystis carinii from AIDS patients with recurrent pneumonia
    • Tsolaki A.G., Miller R.F., Underwood A.P., Banerji S., Wakefield A.E. Genetic diversity at the internal transcribed spacer regions of the rRNA operon among isolates of Pneumocystis carinii from AIDS patients with recurrent pneumonia. J. Infect. Dis. 1996, 174:141-156.
    • (1996) J. Infect. Dis. , vol.174 , pp. 141-156
    • Tsolaki, A.G.1    Miller, R.F.2    Underwood, A.P.3    Banerji, S.4    Wakefield, A.E.5
  • 24
    • 66749120759 scopus 로고    scopus 로고
    • Clinical significance and phylogenetic relationship of novel Australian Pneumocystis jirovecii genotypes
    • van Hal S.J., Gilgado F., Doyle T., Barratt J., Stark D., Meyer W., Harkness J. Clinical significance and phylogenetic relationship of novel Australian Pneumocystis jirovecii genotypes. J. Clin. Microbiol. 2009, 47:1818-1823.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 1818-1823
    • van Hal, S.J.1    Gilgado, F.2    Doyle, T.3    Barratt, J.4    Stark, D.5    Meyer, W.6    Harkness, J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.