Identification of exotic North American crayfish in Europe by DNA barcoding

Knowledge and Management of Aquatic Ecosystems

Volumn , Issue 401, 2011, Pages

  Filipova L ^a,b   Grandjean, F ^b   Chucholl, C ^c   Soes, D M ^d,e   Petrusek, A ^a  

^a CHARLES UNIVERSITY   (Czech Republic)

^b UNIVERSITÉ DE POITIERS   (France)

^c UNIVERSITY OF ULM   (Germany)

^d Bureau Waardenburg   (Netherlands)

^e NATURALIS BIODIVERSITY CENTER   (Netherlands)

Author keywords

barcoding; COI; Europe; invasive crayfish; North America; Orconectes; Procambarus

Indexed keywords

ASTACOIDEA; CAMBARID SP. AB-2002; CAMBARIDAE; ORCONECTES IMMUNIS; ORCONECTES JUVENILIS; PROCAMBARUS; PROCAMBARUS ACUTUS; PROCAMBARUS FALLAX; PROCAMBARUS ZONANGULUS;

EID: 79956304790     PISSN: 19619502     EISSN: None     Source Type: Journal    
DOI: 10.1051/kmae/2011025     Document Type: Article

References (56)

1. Ahern D., England J. and Ellis A., 2008. The virile crayfish, Orconectes virilis (Hagen, 1870) (Crustacea: Decapoda: Cambaridae), identified in the UK. Aquat. Inv., 3, 102-104.
2. Armstrong K.F. and Ball S.L., 2005. DNA barcodes for biosecurity: invasive species identification. Phil. Trans. R. Soc. B., 360, 1813-1823. (Pubitemid 44365042)
3. Barbaresi S., Gherardi F.,Mengoni A. and Souty-Grosset C., 2007. Genetics and invasion biology in fresh waters: a pilot study of Procambarus clarkii in Europe. In: Gherardi F. (ed.), Biological invaders in inland waters: Profiles, distribution, and threats, Invading Nature: Springer Series in Invasion Ecology, Springer, Dordrecht, 381-400.
4. Bickford D., Lohman D.J., Sodhi N.S., Ng P.K.L., Meier R., Winker K., Ingram K.K. and Das I., 2007. Cryptic species as a window on diversity and conservation. Trends Ecol. Evol., 22, 148-155. (Pubitemid 46273824)
5. Briski E., Cristescu M.E., Bailey S.A. and MacIsaac H.J., 2010. Use of DNA barcoding to detect invertebrate invasive species from diapausing eggs. Biol. Inv., doi: 10.1007/s10530-010-9892-7.
6. Buhay J.E., 2009. "COI-like" sequences are becoming problematic in molecular systematic and DNA barcoding studies. J. Crustacean Biol., 29, 96-110.
7. Chucholl C., 2006. Konkurrenz zwischen zwei Neozoen: Verdrängungs- Mechanismen zwischen Kamberkrebs (Orconectes limosus, Crustacea: Decapoda) und Kalikokrebs (O. immunis). [Competition between two Neozoans: Mechanisms of exclusion between spiny-cheek crayfish (Orconectes limosus, Crustacea: Decapoda) and calico crayfish (O. immunis)]. MSc. thesis, Ulm University, Ulm, 97 p.
8. Chucholl C. and Daudey T., 2008. First record of Orconectes juvenilis (Hagen, 1870) in eastern France: update to the species identity of a recently introduced orconectid crayfish (Crustacea: Astacida). Aquat. Inv., 3, 105-107.
9. Chucholl C. and Pfeiffer M., 2010. First evidence for an established Marmorkrebs (Decapoda, Astacida, Cambaridae) population in Southwestern Germany, in syntopic occurrence with Orconectes limosus (Rafinesque, 1817). Aquat. Inv., 5, 405-412.
10. Chucholl C., Stich H.B. and Maier G., 2008. Aggressive interactions and competition for shelter between a recently introduced and an established invasive crayfish: Orconectes immunis vs.O. limosus. Fund. Appl. Limnol., 172, 27-36.
11. Dasmahapatra K.K., Elias M., Hill R.I., Hoffman J.I. and Mallet J., 2009. Mitochondrial DNA barcoding detects some species that are real, and some that are not. Mol. Ecol. Res., 10, 264-273.
12. Daudey T., 2006. Diagnostic des peuplements astacicoles de la vallée du Dessoubre. Master thesis QTEBV, Université de Franche-Comté, Fédération de Pêche du Doubs, 65 p.
13. Dehus P., Phillipson S., Bohl E., Oidtmann B., Keller M. and Lechleiter S., 1999. German conservation strategies for native crayfish species with regard to alien species. In: Gherardi F. and Holdich D.M. (eds.), Crayfish in Europe as alien species. How to make the best of a bad situation?, A.A. Balkema, Rotterdam, 149-159.
14. Dillman C.D., Wagner B.K. and Wood R.M., 2010. Phylogenetic estimation of species limits in dwarf crayfishes from the Ozarks: Orconectes macrus and Orconectes nana (Decapoda: Cambaridae). Southeast. Nat., 9, 185-198.
15. Dussling U. and Hoffmann C., 1998. First discovery of a population of Orconectes immunis in Germany. IAA Newsletter - Crayfish News, 20, 5.
16. Fetzner J.W. Jr., Sheehan R.J. and Seeb L.W., 1997. Genetic implications of broodstock selection for crayfish aquaculture in the Midwestern United States. Aquaculture, 154, 39-55. (Pubitemid 27403010)
17. Filipová L., Kozubíková E. and Petrusek A., 2009. Allozyme variation in Czech populations of the invasive spiny-cheek crayfish Orconectes limosus (Cambaridae). Knowl. Managt. Aquatic Ecosyst., 394-395, 10.
18. Filipová L., Holdich D.M., Lesobre J., Grandjean F. and Petrusek A., 2010. Cryptic diversity within the invasive virile crayfish Orconectes virilis (Hagen, 1870) species complex: new lineages recorded in both native and introduced ranges. Biol. Inv.,12, 983-989.
19. Floyd R., Lima J., deWaard J., Humble L. and Hanner R., 2010. Common goals: policy implications of DNA barcoding as a protocol for identification of arthropod pests. Biol. Inv., 12, 2947-2954.
20. Folmer O., Black M., Hoeh W., Lutz R. and Vrijenhoek R., 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol., 3, 294-299.
21. Gelmar C., Pätzold F., Grabow K. and Martens A., 2006. The calico crayfish Orconectes immunis at the northern Upper Rhine: a newly introduced American crayfish is spreading rapidly in Central Europe (Crustacea: Cambaridae). Lauterbornia, 56, 15-25 (in German with English abstract).
22. Gherardi F. and Holdich D.M. (eds.), 1999. Crayfish in Europe as alien species. How to make the best of a bad situation?, A.A. Balkema, Rotterdam, Brookfield, 299 p.
23. Grandjean F. and Souty-Grosset C., 1997. Preliminary results on the genetic variability of mitochondrial DNA in the signal crayfish,Pacifastacus leniusculus Dana. C. R. Acad. Sci. III, 320, 551-556. (Pubitemid 27464787)
24. Hebert P.D.N., Ratnasingham S. and deWaard J.R., 2003. Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc. R. Soc. Lond. B (Suppl.), 270, S96-S99. (Pubitemid 36960325)
25. Hobbs H.H. Jr., 1972. Biota of Freshwater Ecosystems: Identification Manual No. 9, Crayfishes (Astacidea) of North and Middle America, For the Environmental Protection Agency, Project # 18050 ELD. Available at: http://iz.carnegiemnh.org/crayfish/Keys/index2.htm (accessed on 29th December 2010).
26. Hobbs H.H. Jr., 1989. An illustrated checklist of the American crayfishes (Decapoda: Astacidae, Cambaridae, and Parastacidae). Smiths. Contrib. Zool., 480, 236 p.
27. Hobbs H.H. III, Jass J.P. and Huner J.V., 1989. A review of global crayfish introductions with particular emphasis on two North American species (Decapoda, Cambaridae). Crustaceana, 56, 299-316.
28. Holdich D.M., 2003. Crayfish in Europe - an overview of taxonomy, legislation, distribution, and crayfish plague outbreaks. In: Holdich D.M. and Sibley P.J. (eds.), Management and Conservation of Crayfish, Proceedings of a conference held on 7th November 2002 at the Nottingham Forest Football Club, Nottingham, UK, Environment Agency, Bristol, 15-34.
29. Holdich D.M. and Reeve I.D., 1988. Functional morphology and anatomy. In: Holdich D.M. and Lowery R.S. (eds.), Freshwater crayfish: biology, management and exploitation, London, Chapman and Hall, 11-51.
30. Holdich D.M., Reynolds J.D., Souty-Grosset C. and Sibley P.J., 2009. A review of the ever increasing threat to European crayfish from non-indigenous crayfish species. Knowl. Managt. Aquatic Ecosyst., 394-395, 11.
31. Hulák M., Kašpar V., Kozák P., Filipová L. and Petrusek A., 2010. Cross-species amplification of microsatellite markers in the invasive spiny-cheek crayfish (Orconectes limosus): assessment and application. J. Appl. Genet., 51, 73-78.
32. Humble L.M., DeWaard J.R. and Quinn M., 2009. Delayed recognition of the European poplar shoot borer, Gypsonoma aceriana (Duponchel) (Lepidoptera: Tortricidae), in Canada. J. Entomol. Soc. Brit. Columbia, 106, 61-70.
33. Huner J.V., Moody M. and Thune R., 1994. Cultivation of freshwater crayfishes in North America. In: Huner J.V. (ed.), Freshwater crayfish aquaculture in North America, Europe, and Australia, Families Astacidae, Cambaridae, Parastacidae, Food Product Press, New York, 5-156.
34. Jones J.P., Rasamy J.R., Harvey A., Toon A., Oidtmann B., Randrianarison M.H., Raminosoa N. and Ravoahangimalala O.R., 2009. The perfect invader: a parthenogenetic crayfish poses a new threat to Madagascar's freshwater biodiversity. Biol. Inv., 11, 1475-1482.
35. Kossakowski J., 1966. Raki [Crayfish]. Panstwowe wydawnictwo rolnicke I lesne, Warszawa, 292 p. (in Polish).
36. Martin P., Dorn N.J., Kawai T., van der Heiden C. and Scholtz G., 2010a. The enigmatic Marmorkrebs (marbled crayfish) is the parthenogenetic form of Procambarus fallax (Hagen, 1870). Contrib. Zool., 79, 107-118.
37. Martin P., Shen H., Füllner G. and Scholtz G., 2010b. The first record of the parthenogenetic Marmorkrebs (Decapoda, Astacida, Cambaridae) in the wild in Saxony (Germany) raises the question of its actual threat to European freshwater ecosystems. Aquat. Inv., 5, 397-403.
38. Marzano F.N., Scalici M., Chiesa S., Gherardi F., Piccinini A. and Gibertini G., 2009. The first record of the marbled crayfish adds further threats to fresh waters in Italy. Aquat. Inv., 4, 401-404.
39. Mathews L.M., Adams L., Anderson E., Basile M., Gottardi E. and Buckholt M.A., 2008. Genetic and morphological evidence for substantial hidden biodiversity in a freshwater crayfish species complex. Mol. Phylogenet. Evol., 48, 126-135.
40. Nylander J.A.A., 2004.MrModeltest 2.3. Program distributed by the author, Evolutionary Biology Centre, Uppsala University.
41. Pöckl M., Holdich D.M. and Pennerstorfer J., 2006. Identifying native and alien crayfish species in Europe, European Project CRAYNET, 47 p.
42. Romaire R.P., McClain W.R., Shirley M.G. and Lutz C.G., 2005. Crawfish aquaculture - marketing, Southern Regional Aquaculture Center, SRAC Publication, 2402, 1-8.
43. Ronquist F. and Huelsenbeck J.P., 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574. (Pubitemid 37038874)
44. Saunders G.W., 2009. Routine DNA barcoding of Canadian Gracilariales (Rhodophyta) reveals the invasive species Gracilaria vermiculophylla in British Columbia. Mol. Ecol. Res., 9, 140-150.
45. Scalici M., Chiesa S., Gherardi F., Ruffini M., Gibertini G. and Marzano F.N., 2009. The new threat to Italian inland waters from the alien crayfish "gang": the Australian Cherax destructor Clark, 1936. Hydrobiologia, 632, 341-345.
46. Scholtz G., Braband A., Tolley L., Reimann A., Mittmann B., Lukhaup C., Steuerwald F. and Vogt G., 2003. Parthenogenesis in an outsider crayfish. Nature, 421, 806.
47. Soes D.M. and van Eekelen R., 2006. Rivierkreeften, een oprukkend probleem? [Are exotic crayfish becoming a problem?]. De Levende Natuur, 107, 56-59.
48. Souty-Grosset C., Holdich D.M., Noël P.Y., Reynolds J.D. and Haffner P., 2006. Atlas of crayfish in Europe. In: Patrimoines naturels, 64, Muséum national d'Histoire naturelle, Paris.
49. Tamura K., Dudley J., Nei M. and Kumar S., 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol., 24, 1596-1599. (Pubitemid 47236692)
50. Taylor C.A., 2000. Systematic studies of the Orconectes juvenilis complex (Decapoda: Cambaridae), with descriptions of two new species. J. Crustacean Biol., 20, 132-152. (Pubitemid 30106729)
51. Taylor C.A. and Hardman M., 2002. Phylogenetics of the crayfish subgenus Crockerinus, genus Orconectes (Decapoda: Cambaridae), based on cytochrome oxidase I. J. Crustacean Biol., 22, 874-881. (Pubitemid 35293813)
52. Taylor C.A. and Knouft J.H., 2006. Historical influences on genital morphology among sympatric species: gonopod evolution and reproductive isolation in the crayfish genus Orconectes (Cambaridae). Biol. J. Linn. Soc.,89, 1-12.
53. Trontelj P., Machino Y. and Sket B., 2005. Phylogenetic and phylogeographic relationships in the crayfish genus Austropotamobius inferred frommitochondrial COI gene sequences. Mol. Phylogenet. Evol., 34, 212-226. (Pubitemid 39584206)
54. Van de Wiel C.C.M., Van der Schoot J., Van Valkenburg J.L.C.H., Duistermaat H. and Smulders M.J.M., 2009. DNA barcoding discriminates the noxious invasive plant species, floating pennywort (Hydrocotyle ranunculoides L.f.), from non-invasive relatives. Mol. Ecol. Res., 9, 1086-1091.
55. Westman K., 2002. Alien crayfish in Europe: negative and positive impacts and interactions with native crayfish. In: Leppäkoski E., Gollasch S. and Olenin S. (eds.), Invasive aquatic species of Europe, Distribution, impacts and management, Kluwer Academic Publishers, the Netherlands, 76-95.
56. Whitworth T.L., Dawson R.D., Magalon H. and Baudry E., 2007. DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae). Proc. R. Soc. B, 274, 1731-1739. (Pubitemid 47356124)