Genetic diversity of brassica oleracea var. capitata gene bank accessions assessed by AFLP

Electronic Journal of Biotechnology

Volumn 14, Issue 3, 2011, Pages

  Faltusová, Zuzana ^a   Kučera, Ladislav ^a   Ovesná, Jaroslava ^a  

^a CROP RESEARCH INSTITUTE   (Czech Republic)

Author keywords

Amplified fragment length polymorphism; Brassica oleracea var. capitata; Cabbage; Discriminatory power; Genetic diversity

Indexed keywords

AMPLIFIED FRAGMENT LENGTH POLYMORPHISMS; BRASSICA OLERACEA VAR. CAPITATA; CABBAGE; DISCRIMINATORY POWER; GENETIC DIVERSITY;

BIODIVERSITY; GENES;

VALUE ENGINEERING;

PLANT DNA;

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; ARTICLE; BRASSICA; BRASSICA PEKINENSIS; CABBAGE; CONTROLLED STUDY; CULTIVAR; GENETIC ANALYSIS; GENETIC DATABASE; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GEOGRAPHIC ORIGIN; LANDRACE; NONHUMAN; PLANT LEAF; SPECIES DIFFERENCE;

BRASSICA OLERACEA VAR. CAPITATA; BRASSICA RAPA; BRASSICA RAPA SUBSP. PEKINENSIS;

EID: 79956258811     PISSN: None     EISSN: 07173458     Source Type: Journal    
DOI: 10.2225/vol14-issue3-fulltext-4     Document Type: Article

References (32)

1. BELAJ, A.; SATOVIC, Z.; CIPRIANI, G.; BALDONI, L.; TESTOLIN, R.; RALLO, L. and TRUJILLO, I. (2003). Comparative study of the discriminating capacity of RAPD, AFLP and SSR markers and of their effectiveness in establishing genetic relationships in olive. TAG Theoretical and Applied Genetics, vol. 107, no. 4, p. 736-744. [CrossRef]
2. Čurn, V.; Ovesná, J.; Sáková, L. and Sobotka, R. (2002). Identification of oilseed rape cultivars using AFLP markers. Journal of Central European Agriculture, vol. 3, no. 4, p. 286-292.
3. DAS, S.; RAJAGOPAL, J.; BHATIA, S.; SRIVASTAVA, P.S. and LAKSHMIKUMARAN, M. (1999). Assessment of genetic variation within Brassica campestris cultivars using amplified fragment length polymorphism and random amplification of polymorphic DNA markers. Journal of Biosciences, vol. 24, no. 4, p. 433-440. [CrossRef]
4. GARCIA, A.A.F.; BENCHIMOL, L.L.; BARBOSA, A.M.M.; GERALDI, I.O.; SOUZA, Jr., C.L. and DE SOUZA, A.P. (2004). Comparison of RAPD, RFLP, AFLP and SSR markers for diversity studies in tropical maize inbred lines. Genetics and Molecular Biology, vol. 27, no. 4, p. 579-588. [CrossRef]
5. GU, Y.; ZHAO, Q.-C.; SUN, D.-L. and SONG, W.-Q. (2008). A genetic linkage map based on AFLP and NBS markers in cauliflower (Brassica oleracea var. botrytis). Botanical Studies, vol. 49, no. 2, p. 93-99.
6. GUTHRIDGE, K.M.; DUPAL, M.P.; KÖLLIKER, R.; JONES, E.S.; SMITH, K.F. and FORSTER, J.W. (2001). AFLP analysis of genetic diversity within and between populations of perennial ryegrass (Lolium perenne L.). Euphytica, vol. 122, no. 1, p. 191-201. [CrossRef]
7. HARTINGS, H.; BERARDO, N.; MAZZINELLI, G.F.; VALOTI, P.; VERDERIO, A. and MOTTO, M. (2008). Assessment of genetic diversity and relationship among maize (Zea mays L.) Italian landraces by morphological traits and AFLP profiling. TAG Theoretical and Applied Genetics, vol. 117, no. 6, p. 831-842. [CrossRef]
8. HUH, M.K. and HUH, H.W. (2001). AFLP fingerprinting of Brassica campestis L. ssp. napus var. nippo-oleifera makino from Korea. Korean Journal of Biological Sciences, vol. 5, no. 2, p. 101-106.
9. JIANG, Y.; TIAN, E.; LI, R.; CHEN, L. and MENG, J. (2007). Genetic diversity of Brassica carinata with emphasis on interspecific crossability with B. rapa. Plant Breeding, vol. 126, no. 5, p. 487-491. [CrossRef]
10. KABOUW, P.; BIERE, A.; VAN DER PUTTEN, W.H. and VAN DAM, N.M. (2010). Intra-specific differences in root and shoot glucosinolate profiles among white cabbage (Brassica oleracea var. capitata) cultivars. Journal of Agricultural and Food Chemistry, vol. 58, no. 1, p. 411-417. [CrossRef]
11. KRESOVICH, S.; WILLIAMS, J.G.K.; MCFERSON, J.R.; ROUTMAN, E.J. and SCHALL, B.A. (1992). Characterization of genetic identities and relationships of Brassica oleracea L. via a random amplified polymorphic DNA assay. TAG Theoretical and Applied Genetics, vol. 85, no. 2-3, p. 190-196. [CrossRef]
12. Kusznierewicz, B.; Bartoszek, A.; Wolska, L.; Drzewiecki, J.; Gorinstein, S. and Namieśnik, J. (2008). Partial characterization of white cabbage (Brassica oleracea var. capitata f. alba) from different regions by glucosinolates, bioactive compounds, total antioxidant activities and proteins. LWT-Food Science and Technology, vol. 41, no. 1, p. 1-9.
13. LIONNETON, E.; RAVERA, S.; SANCHEZ, L.; AUBERT, G.; DELOURME, R. and OCHATT, S. (2002). Development of an AFLP-based linkage map and localization of QTLs for seed fatty acid content in condiment mustard (Brassica juncea). Genome, vol. 45, no. 6, p. 1203-1215. [CrossRef]
14. LIU, R.-H. and MENG, J.-L. (2006). RFLP and AFLP analysis of inter- and intraspecific variation of Brassica rapa and B. napus shows that B. rapa is an important genetic resource for B. napus improvement. Acta Genetica Sinica, vol. 33, no. 9, p. 814-823. [CrossRef]
15. LOMBARD, V.; BARIL, C.P.; DUBREUIL, P.; BLOUET, F. and ZHANG, D. (2000). Genetic relationship and fingerprinting of rapeseed cultivars by AFLP: Consequences for varietal registration. Crop Science, vol. 40, no. 5, p. 1417-1425.
16. MURTAZA, N. (2006). Cotton genetic diversity study by AFLP markers. Electronic Journal of Biotechnology, vol. 9, no. 4. [CrossRef]
17. NEGI, M.S.; SABHARWAL, V.; BHAT, S.R. and LAKSHMIKUMARAN, M. (2004). Utility of AFLP markers for the assessment of genetic diversity within Brassica nigra germplasm. Plant Breeding, vol. 123, no. 1, p. 13-16. [CrossRef]
18. Phippen, W.B.; Kresovich, S.; Candelas, F.G. and Mcferson, J.R. (1997). Molecular characterization can quantify and partition variation among genebank holdings: A case study with phenotypically similar accessions of Brassica oleracea var. capitata L. (cabbage) 'Golden Acre'. TAG Theoretical and Applied Genetics, vol. 94, no. 2, p. 227-234. [CrossRef]
19. POWELL, W.; MORGANTE, M.; ANDRE, C.; HANAFEY, M.; VOGEL, J.; TINGEY, S. and RAFALSKI, A. (1996). The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Molecular Breeding, vol. 2, no. 3, p. 225-238. [CrossRef]
20. SABHARWAL, V.; NEGI, M.S.; BANGA, S.S. and LAKSHMIKUMARAN, M. (2004). Mapping of AFLP markers linked to seed coat colour loci in Brassica juncea (L.) Czern. TAG Theoretical and Applied Genetics, vol. 109, no. 1, p. 160-166. [CrossRef]
21. Sanz-Cortéz, F.; Parfitt, D.E.; Romero, C.; Struss, D.; Llácer, G. and Badenes, M.L. (2003). Intraspecific olive diversity assessed with AFLP. Plant Breeding, vol. 122, no. 2, p. 173-177. [CrossRef]
22. SARIKAMIŞ, G.; BALKAYA, A. and YANMAZ, R. (2009). Glucosinolates within a collection of white head cabbages (Brassica oleracea var. capitata sub. var. alba) from Turkey. African Journal of Biotechnology, vol. 8, no. 19, p. 5046-5052.
23. SINGH, J.; UPADHYAY, A.K.; BAHADUR, A.; SINGH, B.; SINGH, K.P. and RAI, M. (2006). Antioxidant phytochemicals in cabbage (Brassica oleracea L. var. capitata). Scientia Horticulturae, vol. 108, no. 3, p. 233-237. [CrossRef]
24. SRIVASTAVA, A.; GUPTA, V.; PENTAL, D. and PRADHAN, A.K. (2001). AFLP-based genetic diversity assessment amongst agronomically important natural and some newly synthesized lines of Brassica juncea. TAG Theoretical and Applied Genetics, vol. 102, no. 2-3, p. 193-199. [CrossRef]
25. TAKUNO, S.; KAWAHARA, T. and OHNISHI, O. (2007). Phylogenetic relationship among cultivated types of Brassica rapa L. em. Metzg. as revealed AFLP analysis. Genetic Resources and Crop Evolution, vol. 54, no. 2, p. 279-285. [CrossRef]
26. TESSIER, C.; DAVID, J.L.; THIS, P.; BOURSIQUOT, J.M. and CHARRIER, A. (1999). Optimization of the choice of molecular markers for varietal identification in Vitis vinifera L. TAG Theoretical and Applied Genetics, vol. 98, no. 1, p. 171-177. [CrossRef]
27. VAN BERLOO, R.; ZHU, A.; URSEM, R.; VERBAKEL, H.; GORT, G. and VAN EEUWIJK, F.A. (2008). Diversity and linkage disequilibrium analysis within a selected set of cultivated tomatoes. TAG Theoretical and Applied Genetics, vol. 117, no. 1, p. 89-101. [CrossRef]
28. VAN HINTUM, T.J.L.; VAN DE WIEL, C.C.M.; VISSER, D.L.; VAN TREUREN, R. and VOSMAN, B. (2007). The distribution of genetic diversity in a Brassica oleracea gene bank collection related to the effects on diversity of regeneration, as measured with AFLPs. TAG Theoretical and Applied Genetics, vol. 114, no. 5, p. 777-786. [CrossRef]
29. VOS, P.; HOGERS, R.; BLEEKER, M.; REIJANS, M.; VAN DE LEE, T.; HORNES, M.; FRITERS, A.; POT, J.; PELEMAN, J.; KUIPER, M. and ZABEAU, M. (1995). AFLP: A new technique for DNA fingerprinting. Nucleic Acid Research, vol. 23, no. 21, p. 4407-4414. [CrossRef]
30. WARWICK, S.I.; GUGEL, R.K.; Mcdonald, T and FALK, K.C. (2006). Genetic variation of Ethiopian mustard (Brassica carinata A. Braun) germplasm in western Canada. Genetic Resources and Crop Evolution, vol. 53, no. 2, p. 297-312. [CrossRef]
31. WARWICK, S.I.; JAMES, T. and FALK, K.C. (2008). AFLP-based molecular characterization of Brassica rapa and diversity in Canadian spring turnip rape cultivars. Plant Genetic Resources: Characterization and Utilization, vol. 6, no. 1, p. 11-21. [CrossRef]
32. ZHAO, J.; WANG, X.; DENG, B.; LOU, P.; WU, J.; SUN, R.; XU, Z.; VROMANS, J.; KOORNNEEF, M. and BONNEMA, G. (2005). Genetic relationships with Brassica rapa as inferred from AFLP fingerprints. TAG Theoretical and Applied Genetics, vol. 110, no. 7, p. 1301-1314. [CrossRef]