Chlorophyll fluorescence emission as a reporter on cold tolerance in Arabidopsis thaliana accessions

Plant Signaling and Behavior

Volumn 6, Issue 2, 2011, Pages 301-310

  Mishra, Anamika ^a,b   Mishra, Kumud B ^b   Höermiller, Imke I ^c   Heyer, Arnd G ^c   Nedbal, Ladislav ^b  

^a UNIVERSITY OF SOUTH BOHEMIA   (Czech Republic)

^b INSTITUTE OF MATHEMATICS   (Czech Republic)

^c UNIVERSITY OF STUTTGART   (Germany)

Author keywords

Chlorophyll fluorescence; Cold acclimation; Electrolyte leakage; High throughput screening; Natural accessions

Indexed keywords

CHLOROPHYLL; ELECTROLYTE;

ACCLIMATIZATION; ARABIDOPSIS; ARTICLE; COLD; FLUORESCENCE; METABOLISM; PHYSIOLOGICAL STRESS; PHYSIOLOGY;

ACCLIMATIZATION; ARABIDOPSIS; CHLOROPHYLL; COLD TEMPERATURE; ELECTROLYTES; FLUORESCENCE; STRESS, PHYSIOLOGICAL;

ARABIDOPSIS THALIANA;

EID: 79956226362     PISSN: 15592316     EISSN: 15592324     Source Type: Journal    
DOI: 10.4161/psb.6.2.15278     Document Type: Article

References (49)

1. Smallwood M, Bowles DJ. Plants in a cold climate. Philos T R Soc B 2002; 357: 831-846.
2. Moon BY, Higashi SI, Gombos Z, Murata N. Unsaturation of the membrane-lipids of chloroplasts stabilizes the photosynthetic machinery against low-temperature photoinhibition in transgenic tomato plants. Proc Natl Acad Sci USA 1995; 92: 6219-6223.
3. Moffatt B, Ewart V, Eastman A. Cold comfort: plant antifreeze proteins. Physiol Plant 2006; 126: 5-16. doi: 10.1111/j.1399-3054.2006.00618.x
4. Heidarvand L, Amiri RM. What happens in plant molecular responses to cold stress? Acta Physiol Plant 2010; 32:419-431. doi: 10.1007/s11738-009-0451-8.
5. Hincha DK. Cryoprotectin: a plant lipid-transfer protein homologue that stabilizes membranes during freezing. Philos T R Soc B 2002; 357: 909-915.
6. Öquist G, Huner NPA. Cold hardening induced resistance to photoinhibition in winter rye is dependent upon an increase capacity for photosynthesis. Planta 1993; 189: 150-156.
7. Strand A, Hurry V, Henkes S, Huner N, Gustafsson P, Gardeström P, Stitt M. Acclimation of Arabidopsis leaves developing at low temperature: Increasing cytoplasmic volume accompanies increased activities of enzymes in the Calvin cycle and in the sucrose-biosynthesis pathway. Plant Physiol 1999; 119: 1387-1397.
8. Stitt M, Hurry V. A plant for all seasons: alteration in photosynthetic carbon metabolism during cold acclimation in Arabidopsis. Curr Opin Plant Biol 2002; 5:199-206.
9. Mitchellv-Olds T, Schmitt J. Genetic mechanisms and evolutionary significance of natural variation in Arabidopsis. Nature 2006; 441: 947-952. doi:10.1038/ nature04878.
10. Hannah MA, Wiese D, Freund S, Fiehn O, Heyer AG, Hincha DK. Natural genetic variation of freezing tolerance in Arabidopsis. Plant Physiol 2006; 142(1): 98-112.
11. Zhen Y, Ungerer MC. Relaxed selection on the CBF/ DREB1 regulatory genes and reduced freezing tolerance in the southern range of Arabidopsis thaliana. Mol Biol Evol 2008; 25 (12): 2547-2555.
12. Bodner M, Beck E. Effect of supercooling and freezing on photosynthesis in freezing tolerant leaves of Afroalpine gaint rosette plants. Oecologia 1987; 72: 366-371.
13. Reyes-Díaz M, Ulloa N, Zúniga-Feest A, Gutiérrez A, Gidekel M, Alberdi M, Corcuera LJ, Bravo LA. Arabidopsis thaliana avoids freezing by supercooling. J Exp Bot 2006; 57 (14): 3687-3696.
14. Novillo F, Alonso JM, Ecker JR, Salinas J. CBF2/ DREB1C is a negative regulator of CBF1/DREB1B and BF3/DREB1A expression and plays a central role in stress tolerance in Arabidopsis. Proc Natl Acad Sci USA 2004; 101 (11): 3985-3990.
15. Steponkus PL, Lynch DV, Uemura M. The influence of cold-acclimation on the lipid-composition and cryobe-havior of the plasma-membrane of isolated rye protoplasts. Philos T R Soc B 1990; 326(1237): 571-583.
16. Rohde P, Hincha DK, Heyer AG. Heterosis in the freezing tolerance of crosses between two Arabidopsis thaliana accessions (Columbia-0 and C24) that show differences in non-acclimated and acclimated freezing tolerance. Plant J 2004; 38(5):790-799
17. Murray MB, Cape JN, Fowler D. Quantification of frost damage in plant-tissues by rates of electrolyte leakage. New Phytol 1989; 113(3): 307-311.
18. Rumich-Bayer S, Krause GH. Freezing damage and frost tolerance of the photosynthetic apparatus studied with isolated mesophyll protoplasts of Valerianella locusta L. Photosynth Res 1986; 8(2): 161-174.
19. Hincha DK, Sieg F, Bakaltcheva I, Köth H, Schmitt JM. Freeze-thaw damage to thylakoid membranes: specific protection by sugars and proteins. In: Steponkus PL, ed. Advances in low-temperature biology. London: JAI Press, 1996;141-183.
20. Agati G, Cerovic ZG, Moya I. The effect of decreasing temperature up to chilling values on the in vivo F685/F735 chlorophyll fluorescence ratio in Phaseolus vulgaris and Pisum sativum: The role of the photosys-tem I contribution to the 735 nm fluorescence band. Photochem Photobiol 2000; 72 (1): 75-84.
21. Artus NN, Uemura M, Steponkus PL, Gilmour SJ, Lin CT, Thomashow MF. Constitutive expression of the cold-regulated Arabidopsis thaliana COR15a gene affects both chloroplast and protoplast freezing tolerance. Proc Natl Acad Sci USA 1996; 93(23): 13404-13409.
22. Ehlert B, Hincha DK. Chlorophyll fluorescence imaging accurately quantifies freezing damage and cold acclimation responses in Arabidopsis leaves. Plant Methods 2008; 4(1): 12 doi: 10.1186/1746-4811-4-12
23. Rizza F, Pagani D, Stanca AM, Cattivelli L. Use of chlorophyll fluorescence to evaluate the cold acclimation and freezing tolerance of winter and spring oats. Plant Breeding 2001; 120 (5):389-396.
24. Peguero-Pina JJ, Morales F, Gil-Pelegrin E. Frost damage in Pinus sylvestris L. stems assessed by chlorophyll fluorescence in cortical bark chlorenchyma. Ann For Sci 2008; 65(8):813P1-813P6.
25. Baker NR, Rosenqvist E. Applications of chlorophyll fluorescence can improve crop production strategies: an examination of future possibilities. J Exp Bot 2004; 55(403): 1607-1621.
26. Neuner G, Buchner O. Assessment of foliar frost damage: a comparison of in vivo chlorophyll fluorescence with other viability tests. J Appl Bot 1999; 73(1-2): 50-54.
27. Rapacz M. Chlorophyll a fluorescence transient during freezing and recovery in winter wheat. Photosynthetica 2007; 45(3): 409-418.
28. Rapacz M, Wołniczka A. A selection tool for freezing tolerance in common wheat using the fast chlorophyll a fluorescence transcients. Plant Breeding 2009; 128(3):227-234.
29. Pospíšil P, Skotnica J, Nauš J. Low and high temperature dependence of minimum F0 and maximum F chlorophyll fluorescence in vivo. Biochimica et Biophysica Acta 1998; 1363(2): 95-99.
30. Neuner G, Pramsohler M. Freezing and high temperature thresholds of photosystem II compared to ice nucleation, frost and heat damage in evergreen subal-pine plants. Physiol Plant 2006; 126 (2): 196-204.
31. Hacker J, Spindelbock JP, Neuner G. Mesophyll freezing and effects of freeze dehydration visualized by simultaneous measurement of IDTA and differential imaging chlorophyll fluorescence. Plant Cell Environ 2008; 31(11): 1725-1733.
32. Nedbal L, Whitmarsh J. Chlorophyll fluorescence imaging of leaves and fruits. In Papageorgiou G, Govindjee, eds. Chlorophyll a fluorescence: A signature of photosynthesis. Dordrech. Springer, 2004: 389-407.
33. Matouš K, Benediktyova Z, Berger S, Roitsch T, Nedbal L. Case study of combinatorial imaging: What protocol and what chlorophyll fluorescence image to use when visualizing infection of Arabidopsis thaliana by Pseudomonas syringae? Photosynth Res 2006; 90(3): 243-253.
34. Pudil P, Novovicova J, Kittler J. Floating search methods in feature selection. Pattern Recogn Lett 1994; 15(11): 1119-1125.
35. Fukunaga K ed. Introduction to statistical pattern recognition, 2nd edn. San Diego, USA: Academic Press Professional, 1990.
36. Martinez AM, Kak AC. PCA versus LDA. IEEE Trans Pattern Anal Mach Intell 2001; 23(2):228-233. doi:10.1109/34.908974
37. Wang XC, Paliwal KK. Feature extraction and dimensionality reduction algorithms and their applications in vowel recognition. Pattern Recogn 2003; 36(10):2429-2439. doi:10.1016/ S0031-3203(03) 00044-X.
38. Mishra A, Matouš K, Mishra KB, Nedbal L. Towards discrimination of plant species by machine vision: advanced statistical analysis of chlorophyll fluorescence transients. J Fluoresc 2009; 19(5): 905-913.
39. Dowgert MF, Steponkus PL. Behaviour of the plasma-membrane of isolated protoplasts during a freeze thaw cycle. Plant Physiol 1984; 75(4): 1139-1151.
40. Steponkus PL. Role of the plasma membrane in freezing-injury and cold acclimation. Annu Rev Plant Physiol Plant Mol Biol 1984; 35: 543-584.
41. Barth C, Krause GH. Inhibition of photosystems I and II in chilling-sensitive and chilling-tolerant plants under light and low-temperature stress. Zeitschrift für Naturforschung C, J Biosci 1999; 54(9-10): 645-657.
42. Maxwell K, Johnson GN. Chlorophyll fluorescence: A practical guide. J Exp Bot 2000; 51(345): 659-668.
43. Demeter S, Rozsa Z, Vass I, Hideg E. Thermo-luminescence study of charge recombination in photo-system-II at low temperatures.2. Oscillatory properties of the ZV and thermo-luminescence bands in chloroplast dark-adapted for various time periods. Biochim Biophys Acta 1985; 809(3): 379-387.
44. Krause GH, Somersalo S. Fluorescence as a tool in photosynthesis research: Application in studies of photoinhibition, cold acclimation and freezing stress. Philos T R Soc B 1989; 323 (1216): 281-293.
45. Govindjee. Sixty-three years since Kautsky: chlorophyll a fluorescence. Aust J Plant Physiol 1995; 22: 131-160.
46. Collard BCY, Jahufer MZZ, Brouwer JB, Pang ECK. An introduction to markers, quantitative trait loci (QTL) mapping and marker-assisted selection for crop improvement: The basic concepts. Euphytica 2005; 142(1-2): 169-196. DOI: 10.1007/s10681-005-1681-5.
47. Codrea MC, Hakala-Yatkin M, Karlund-Marttila A, Nedbal L, Aittokallio T, Nevalainen OS, Tyystjävi E. Mahalanobis distance screening of Arabidopsis mutants with chlorophyll fluorescence. Photosynth Res 2010; 105: 273-283.
48. Iftime D, Hannah MA, Peterbauer T, Heyer AG. Stachyose in the cytosol does not influence freezing tolerance of transgenic Arabidopsis expressing stachyose synthase from adzuki bean. Plant Sci 2011; 180(1): 24-30. doi: 10.1016/j.plantsci.2010.07.012
49. Nedbal L, Soukupová J, Kaftan D, Whitmarsh J, Trtílek M. Kinetic imaging of chlorophyll fluorescence using modulated light. Photosynth Res 2000; 66(1-2): 3