메뉴 건너뛰기




Volumn 193, Issue 10, 2011, Pages 2637-2641

Efficient extension of slipped DNA intermediates by DinB is required to escape primer template realignment by DnaQ

Author keywords

[No Author keywords available]

Indexed keywords

DINB POLYMERASE; DNA; DNA DIRECTED RNA POLYMERASE III; DNA POLYMERASE; UNCLASSIFIED DRUG;

EID: 79956117015     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00005-11     Document Type: Article
Times cited : (4)

References (21)
  • 1
    • 31544450286 scopus 로고    scopus 로고
    • Construction of Escherichia coli K-12 in-frame, singlegene knockout mutants: the Keio collection
    • Baba, T., et al. 2006. Construction of Escherichia coli K-12 in-frame, singlegene knockout mutants: the Keio collection. Mol. Syst. Biol. 2:2006.0008.
    • (2006) Mol. Syst. Biol. , vol.2 , pp. 2006-2008
    • Baba, T.1
  • 2
    • 0015499993 scopus 로고
    • Enzymatic synthesis of deoxyribonucleic acid 36. A proofreading function for the 3' leads to 5' exonuclease activity in deoxyribonucleic acid polymerases
    • Brutlag, D., and A. Kornberg. 1972. Enzymatic synthesis of deoxyribonucleic acid. 36. A proofreading function for the 3' leads to 5' exonuclease activity in deoxyribonucleic acid polymerases. J. Biol. Chem. 247:241-248.
    • (1972) J. Biol. Chem. , vol.247 , pp. 241-248
    • Brutlag, D.1    Kornberg, A.2
  • 3
    • 61449241642 scopus 로고    scopus 로고
    • Y-family DNA polymerases may use two different dNTP shapes for insertion: a hypothesis and its implications
    • Chandani, S., and E. L. Loechler. 2009. Y-family DNA polymerases may use two different dNTP shapes for insertion: a hypothesis and its implications. J. Mol. Graph. Model. 27:759-769.
    • (2009) J. Mol. Graph. Model. , vol.27 , pp. 759-769
    • Chandani, S.1    Loechler, E.L.2
  • 4
    • 0025339237 scopus 로고
    • A set of lacZ mutations in Escherichia coli that allow rapid detection of specific frameshift mutations
    • Cupples, C. G., M. Cabrera, C. Cruz, and J. H. Miller. 1990. A set of lacZ mutations in Escherichia coli that allow rapid detection of specific frameshift mutations. Genetics 125:275-280.
    • (1990) Genetics , vol.125 , pp. 275-280
    • Cupples, C.G.1    Cabrera, M.2    Cruz, C.3    Miller, J.H.4
  • 5
    • 0024381281 scopus 로고
    • Presence of the dnaQ-rnh divergent transcriptional unit on a multicopy plasmid inhibits induced mutagenesis in Escherichia coli
    • Foster, P. L., A. D. Sullivan, and S. B. Franklin. 1989. Presence of the dnaQ-rnh divergent transcriptional unit on a multicopy plasmid inhibits induced mutagenesis in Escherichia coli. J. Bacteriol. 171:3144-3151.
    • (1989) J. Bacteriol. , vol.171 , pp. 3144-3151
    • Foster, P.L.1    Sullivan, A.D.2    Franklin, S.B.3
  • 6
    • 77954903264 scopus 로고    scopus 로고
    • UmuD(2) inhibits a non-covalent step during DinB-mediated template slippage on homopolymeric nucleotide runs
    • Foti, J. J., A. M. Delucia, C. M. Joyce, and G. C. Walker. 2010. UmuD(2) inhibits a non-covalent step during DinB-mediated template slippage on homopolymeric nucleotide runs. J. Biol. Chem. 285:23086-23095.
    • (2010) J. Biol. Chem. , vol.285 , pp. 23086-23095
    • Foti, J.J.1    Delucia, A.M.2    Joyce, C.M.3    Walker, G.C.4
  • 8
    • 37349132340 scopus 로고    scopus 로고
    • UmuD and RecA directly modulate the mutagenic potential of the Y family DNA polymerase DinB
    • Godoy, V. G., et al. 2007. UmuD and RecA directly modulate the mutagenic potential of the Y family DNA polymerase DinB. Mol. Cell 28:1058-1070.
    • (2007) Mol. Cell , vol.28 , pp. 1058-1070
    • Godoy, V.G.1
  • 9
    • 75849120860 scopus 로고    scopus 로고
    • A DinB variant reveals diverse physiological consequences of incomplete TLS extension by a Y-family DNA polymerase
    • Jarosz, D. F., S. E. Cohen, J. C. Delaney, J. M. Essigmann, and G. C. Walker. 2009. A DinB variant reveals diverse physiological consequences of incomplete TLS extension by a Y-family DNA polymerase. Proc. Natl. Acad. Sci. U. S. A. 106:21137-21142.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 21137-21142
    • Jarosz, D.F.1    Cohen, S.E.2    Delaney, J.C.3    Essigmann, J.M.4    Walker, G.C.5
  • 10
    • 30544445218 scopus 로고    scopus 로고
    • A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates
    • Jarosz, D. F., V. G. Godoy, J. C. Delaney, J. M. Essigmann, and G. C. Walker. 2006. A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates. Nature 439:225-228.
    • (2006) Nature , vol.439 , pp. 225-228
    • Jarosz, D.F.1    Godoy, V.G.2    Delaney, J.C.3    Essigmann, J.M.4    Walker, G.C.5
  • 11
    • 0033548231 scopus 로고    scopus 로고
    • Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase
    • Johnson, R. E., S. Prakash, and L. Prakash. 1999. Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, Poleta. Science 283: 1001-1004.
    • (1999) Poleta. Science , vol.283 , pp. 1001-1004
    • Johnson, R.E.1    Prakash, S.2    Prakash, L.3
  • 12
    • 0031443646 scopus 로고    scopus 로고
    • Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA
    • Kim, S. R., et al. 1997. Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA. Proc. Natl. Acad. Sci. U. S. A. 94:13792-13797.
    • (1997) Proc. Natl. Acad. Sci. U. S. A. , vol.94 , pp. 13792-13797
    • Kim, S.R.1
  • 13
    • 0034789619 scopus 로고    scopus 로고
    • Roles of chromosomal and episomal dinB genes encoding DNA pol IV in targeted and untargeted mutagenesis in Escherichia coli
    • Kim, S. R., K. Matsui, M. Yamada, P. Gruz, and T. Nohmi. 2001. Roles of chromosomal and episomal dinB genes encoding DNA pol IV in targeted and untargeted mutagenesis in Escherichia coli. Mol. Genet. Genomics 266: 207-215.
    • (2001) Mol. Genet. Genomics , vol.266 , pp. 207-215
    • Kim, S.R.1    Matsui, K.2    Yamada, M.3    Gruz, P.4    Nohmi, T.5
  • 14
    • 0033578040 scopus 로고    scopus 로고
    • The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase eta
    • Masutani, C., et al. 1999. The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase eta. Nature 399:700-704.
    • (1999) Nature , vol.399 , pp. 700-704
    • Masutani, C.1
  • 15
    • 1542287220 scopus 로고    scopus 로고
    • Preferential cis-syn thymine dimer bypass by DNA polymerase eta occurs with biased fidelity
    • McCulloch, S. D., et al. 2004. Preferential cis-syn thymine dimer bypass by DNA polymerase eta occurs with biased fidelity. Nature 428:97-100.
    • (2004) Nature , vol.428 , pp. 97-100
    • McCulloch, S.D.1
  • 16
    • 0029794521 scopus 로고    scopus 로고
    • Kinetic mechanism of the 3'35' proofreading exonuclease of DNA polymerase III Analysis by steady state and pre-steady state methods
    • Miller, H., and F. W. Perrino. 1996. Kinetic mechanism of the 3'35' proofreading exonuclease of DNA polymerase III. Analysis by steady state and pre-steady state methods. Biochemistry 35:12919-12925.
    • (1996) Biochemistry , vol.35 , pp. 12919-12925
    • Miller, H.1    Perrino, F.W.2
  • 17
    • 77949570579 scopus 로고    scopus 로고
    • Structural diversity of the Y-family DNA polymerases
    • Pata, J. D. 2010. Structural diversity of the Y-family DNA polymerases. Biochim. Biophys. Acta 1804:1124-1135.
    • (2010) Biochim. Biophys. Acta , vol.1804 , pp. 1124-1135
    • Pata, J.D.1
  • 18
    • 0013997442 scopus 로고
    • Frameshift mutations and the genetic code This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday
    • Streisinger, G., et al. 1966. Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday. Cold Spring Harb. Symp. Quant. Biol. 31:77-84.
    • (1966) Cold Spring Harb. Symp. Quant. Biol. , vol.31 , pp. 77-84
    • Streisinger, G.1
  • 19
    • 0035148764 scopus 로고    scopus 로고
    • umuDC-dnaQ interaction and its implications for cell cycle regulation and SOS mutagenesis in Escherichia coli
    • Sutton, M. D., S. Murli, T. Opperman, C. Klein, and G. C. Walker. 2001. umuDC-dnaQ interaction and its implications for cell cycle regulation and SOS mutagenesis in Escherichia coli. J. Bacteriol. 183:1085-1089.
    • (2001) J. Bacteriol. , vol.183 , pp. 1085-1089
    • Sutton, M.D.1    Murli, S.2    Opperman, T.3    Klein, C.4    Walker, G.C.5
  • 20
    • 40849124424 scopus 로고    scopus 로고
    • Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh
    • Wilson, R. C., and J. D. Pata. 2008. Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh. Mol. Cell 29: 767-779.
    • (2008) Mol. Cell , vol.29 , pp. 767-779
    • Wilson, R.C.1    Pata, J.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.