-
1
-
-
0035498349
-
Photoisomerization in rhodopsin
-
DOI 10.1023/A:1013123016803
-
Kandori, H.; Shichida, Y.; Yoshizawa, T. Photoisomerization in Rhodopsin Biochemistry (Moscow) 2001, 66, 1197-1209 (Pubitemid 34048178)
-
(2001)
Biochemistry (Moscow)
, vol.66
, Issue.11
, pp. 1197-1209
-
-
Kandori, H.1
Shichida, Y.2
Yoshizawa, T.3
-
2
-
-
0034646178
-
Probing the photoreaction mechanism of phytochrome through analysis of resonance Raman vibrational spectra of recombinant analogues
-
DOI 10.1021/bi991688z
-
Andel, F., III; Murphy, J. T.; Haas, J. A.; McDowell, M. T.; van der Hoef, I.; Lugtenburg, J.; Lagarias, J. C.; Mathies, R. A. Probing the Photoreaction Mechanism of Phytochrome through Analysis of Resonance Raman Vibrational Spectra of Recombinant Analogues Biochemistry 2000, 39, 2667-2676 (Pubitemid 30148920)
-
(2000)
Biochemistry
, vol.39
, Issue.10
, pp. 2667-2676
-
-
Andel III, F.1
Murphy, J.T.2
Haas, J.A.3
McDowell, M.T.4
Van Der Hoef, I.5
Lugtenburg, J.6
Lagarias, J.C.7
Mathies, R.A.8
-
3
-
-
0029743968
-
Photobiology of microorganisms: How photosensors catch a photon to initialize signalling
-
Hellingwerf, K. J.; Hoff, W. D.; Crielaard, W. Photobiology of Microorganisms: How Photosensors Catch a Photon to Initialize Signaling Mol. Microbiol. 1996, 21, 683-693 (Pubitemid 26281517)
-
(1996)
Molecular Microbiology
, vol.21
, Issue.4
, pp. 683-693
-
-
Hellingwerf, K.J.1
Hoff, W.D.2
Crielaard, W.3
-
4
-
-
0031470701
-
Arabidopsis NPH1: A protein kinase with a putative redox-sensing domain
-
DOI 10.1126/science.278.5346.2120
-
Huala, E.; Oeller, P. W.; Liscum, E.; Han, I. -S.; Larsen, E.; Briggs, W. R. Arabidopsis NPH1: A Protein Kinase with a Putative Redox-Sensing Domain Science 1997, 278, 2120-2123 (Pubitemid 28028321)
-
(1997)
Science
, vol.278
, Issue.5346
, pp. 2120-2123
-
-
Huala, E.1
Oeller, P.W.2
Liscum, E.3
Han, I.-S.4
Larsen, E.5
Briggs, W.R.6
-
5
-
-
0033617475
-
Cryptochromes: Blue light receptors for plants and animals
-
DOI 10.1126/science.284.5415.760
-
Cashmore, A. R.; Jarillo, J. A.; Wu, Y. J.; Liu, D. M. Cryptochromes: Blue Light Receptors for Plants and Animals Science 1999, 284, 760-765 (Pubitemid 29291333)
-
(1999)
Science
, vol.284
, Issue.5415
, pp. 760-765
-
-
Cashmore, A.R.1
Jarillo, J.A.2
Wu, Y.-J.3
Liu, D.4
-
6
-
-
0036016438
-
Photoexcited structure of a plant photoreceptor domain reveals a light-driven molecular switch
-
DOI 10.1105/tpc.010475
-
Crosson, S.; Moffat, K. Photoexcited Structure of a Plant Photoreceptor Domain Reveals a Light-Driven Molecular Switch Plant Cell 2002, 14, 1067-1075 (Pubitemid 34609217)
-
(2002)
Plant Cell
, vol.14
, Issue.5
, pp. 1067-1075
-
-
Crosson, S.1
Moffat, K.2
-
7
-
-
0029127546
-
Association of Flavin Adenine Dinucleotide with the Arabidopsis Blue Light Receptor CRY1
-
Lin, C.; Robertson, D. E.; Ahmad, M.; Raibekas, A. A.; Jorns, M. S.; Dutton, P. L.; Cashmore, A. R. Association of Flavin Adenine Dinucleotide with the Arabidopsis Blue Light Receptor CRY1 Science 1995, 269, 968-970
-
(1995)
Science
, vol.269
, pp. 968-970
-
-
Lin, C.1
Robertson, D.E.2
Ahmad, M.3
Raibekas, A.A.4
Jorns, M.S.5
Dutton, P.L.6
Cashmore, A.R.7
-
8
-
-
0037031561
-
Association of Flavin Adenine Dinucleotide with the Arabidopsis Blue Light Receptor CRY1
-
Masuda, S.; Bauer, C. E. Association of Flavin Adenine Dinucleotide with the Arabidopsis Blue Light Receptor CRY1 Cell 2002, 110, 613-623
-
(2002)
Cell
, vol.110
, pp. 613-623
-
-
Masuda, S.1
Bauer, C.E.2
-
9
-
-
0037186598
-
A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis
-
DOI 10.1038/4151047a
-
Iseki, M.; Matsunaga, S.; Murakami, A.; Ohno, K.; Shiga, K.; Yoshida, K.; Sugai, M.; Takahashi, T.; Hori, T.; Watanabe, M. A Blue-Light-Activated Adenylyl Cyclase Mediates Photoavoidance in Euglena gracilis Nature 2002, 415, 1047-1051 (Pubitemid 34193455)
-
(2002)
Nature
, vol.415
, Issue.6875
, pp. 1047-1051
-
-
Iseki, M.1
Matsunaga, S.2
Murakami, A.3
Ohno, K.4
Shiga, K.5
Yoshida, K.6
Sugai, M.7
Takahashi, T.8
Hori, T.9
Watanabe, M.10
-
10
-
-
0036804709
-
BLUF: A novel FAD-binding domain involved in sensory transduction in microorganisms
-
DOI 10.1016/S0968-0004(02)02181-3, PII S0968000402021813
-
Gomelsky, M.; Klug, G. BLUF: A Novel FAD-Binding Domain Involved in Sensory Transduction in Microorganisms Trends Biol. Sci. 2002, 27, 497-500 (Pubitemid 35279589)
-
(2002)
Trends in Biochemical Sciences
, vol.27
, Issue.10
, pp. 497-500
-
-
Gomelsky, M.1
Klug, G.2
-
11
-
-
33746653375
-
Hydrogen-bond switching through a radical pair mechanism in a flavin-binding photoreceptor
-
DOI 10.1073/pnas.0600720103
-
Gauden, M.; van Stokkum, I. H. M.; Key, J. M.; Lührs, D. C.; van Grondelle, R.; Hegemann, P.; Kennis, J. T. M. Hydrogen-Bond Switching through a Radical Pair Mechanism in a Flavin-Binding Photoreceptor Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 10895-10900 (Pubitemid 44150534)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.29
, pp. 10895-10900
-
-
Gauden, M.1
Van Stokkum, I.H.M.2
Key, J.M.3
Luhrs, D.Ch.4
Van Grondelle, R.5
Hegemann, P.6
Kennis, J.T.M.7
-
12
-
-
20144368776
-
Structure of a novel photoreceptor, the BLUF domain of AppA from Rhodobacter sphaeroides
-
DOI 10.1021/bi0502691
-
Anderson, S.; Dragnea, V.; Masuda, S.; Ybe, J.; Moffat, K.; Bauer, C. Structure of a Novel Photoreceptor, the BLUF Domain of AppA from Rhodobacter sphaeroides Biochemistry 2005, 44, 7998-8005 (Pubitemid 40776660)
-
(2005)
Biochemistry
, vol.44
, Issue.22
, pp. 7998-8005
-
-
Anderson, S.1
Dragnea, V.2
Masuda, S.3
Ybe, J.4
Moffat, K.5
Bauer, C.6
-
13
-
-
18144372698
-
Structure of a cyanobacterial BLUF protein, Tll0078, containing a novel fad-binding blue light sensor domain
-
DOI 10.1016/j.jmb.2005.03.067, PII S002228360500358X
-
Kita, A.; Okajima, K.; Morimoto, Y.; Ikeuchi, M.; Miki, K. Structure of a Cyanobacterial BLUF Protein, Tll0078, Containing a Novel FAD-Binding Blue Light Sensor Domain J. Mol. Biol. 2005, 349, 1-9 (Pubitemid 40616444)
-
(2005)
Journal of Molecular Biology
, vol.349
, Issue.1
, pp. 1-9
-
-
Kita, A.1
Okajima, K.2
Morimoto, Y.3
Ikeuchi, M.4
Miki, K.5
-
14
-
-
13444291923
-
Light-Induced Structural Changes of Apoprotein and Chromophore in the Sensor of Blue Light Using FAD (BLUF) Domain of AppA for a Signaling State
-
Masuda, S.; Hasegawa, K.; Ono, T. Light-Induced Structural Changes of Apoprotein and Chromophore in the Sensor of Blue Light Using FAD (BLUF) Domain of AppA for a Signaling State Biochemistry 2005, 44, 1215-1244
-
(2005)
Biochemistry
, vol.44
, pp. 1215-1244
-
-
Masuda, S.1
Hasegawa, K.2
Ono, T.3
-
15
-
-
33845188381
-
Light-induced flipping of a conserved glutamine sidechain and its orientation in the AppA BLUF domain
-
DOI 10.1021/ja0660103
-
Grinstead, J. S.; Avila-Perez, M.; Hellingwerf, K. J.; Boelens, R.; Kaptein, R. Light-Induced Flipping of a Conserved Glutamine Sidechain and Its Orientation in the AppA BLUF Domain J. Am. Chem. Soc. 2006, 128, 15066-15067 (Pubitemid 44853502)
-
(2006)
Journal of the American Chemical Society
, vol.128
, Issue.47
, pp. 15066-15067
-
-
Grinstead, J.S.1
Avila-Perez, M.2
Hellingwerf, K.J.3
Boelens, R.4
Kaptein, R.5
-
16
-
-
34249887915
-
FTIR study on the hydrogen bond structure of a key tyrosine residue in the flavin-binding blue light sensor TePixD from Thermosynechococcus elongatus
-
DOI 10.1021/bi7004653
-
Takahashi, R.; Okajima, K.; Suzuki, H.; Nakamura, H.; Ikeuchi, M.; Noguchi, T. FTIR Study on the Hydrogen-Bond Structure of a Key Tyrosine Residue in the Flavin-Binding Blue Light Sensor TePixD from Thermosynechococcus elongatus Biochemistry 2007, 46, 6459-6467 (Pubitemid 46870113)
-
(2007)
Biochemistry
, vol.46
, Issue.22
, pp. 6459-6467
-
-
Takahashi, R.1
Okajima, K.2
Suzuki, H.3
Nakamura, H.4
Ikeuchi, M.5
Noguchi, T.6
-
17
-
-
37849021588
-
Transient Infrared Spectroscopy of AppA and Its Mutants
-
Stelling, A. L.; Ronayne, K. L.; Nappa, L.; Tonge, P. J.; Meech, S. R. Transient Infrared Spectroscopy of AppA and Its Mutants J. Am. Chem. Soc. 2007, 129, 15556-15564
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 15556-15564
-
-
Stelling, A.L.1
Ronayne, K.L.2
Nappa, L.3
Tonge, P.J.4
Meech, S.R.5
-
18
-
-
43849105414
-
Molecular Models Predict Light-Induced Glutamine Tautomerization in BLUF Photoreceptors
-
Domratcheva, T.; Grigorenko, B. L.; Schlichting, I.; Nemukhin, A. V. Molecular Models Predict Light-Induced Glutamine Tautomerization in BLUF Photoreceptors Biophys. J. 2008, 94, 3872-3879
-
(2008)
Biophys. J.
, vol.94
, pp. 3872-3879
-
-
Domratcheva, T.1
Grigorenko, B.L.2
Schlichting, I.3
Nemukhin, A.V.4
-
19
-
-
51949088672
-
A Conclusive Mechanism of the Photoinduced Reaction Cascade in Blue Light Using Flavin Photoreceptors
-
Sadeghian, K.; Bocola, M.; Schürtz, M. A Conclusive Mechanism of the Photoinduced Reaction Cascade in Blue Light Using Flavin Photoreceptors J. Am. Chem. Soc. 2008, 130, 11501-12513
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 11501-12513
-
-
Sadeghian, K.1
Bocola, M.2
Schürtz, M.3
-
20
-
-
0034734254
-
Role of Internal Water Molecules in Bacteriorhodopsin
-
Kandori, H. Role of Internal Water Molecules in Bacteriorhodopsin Biochim. Biophys. Acta 2000, 1460, 177-191
-
(2000)
Biochim. Biophys. Acta
, vol.1460
, pp. 177-191
-
-
Kandori, H.1
-
21
-
-
64349113842
-
Identification of FTIR Bands Due to Internal Water Molecules around the Quinone Binding Sites in the Reaction Center from Rhodobacter sphaeroides
-
Iwata, T.; Paddock, M. L.; Okamura, M. Y.; Kandori, H. Identification of FTIR Bands Due to Internal Water Molecules around the Quinone Binding Sites in the Reaction Center from Rhodobacter sphaeroides Biochemistry 2009, 48, 1220-1229
-
(2009)
Biochemistry
, vol.48
, pp. 1220-1229
-
-
Iwata, T.1
Paddock, M.L.2
Okamura, M.Y.3
Kandori, H.4
-
22
-
-
0037048688
-
Photoreaction of the Cysteine S-H Group in the LOV2 Domain of Adiantum Phytochrom3
-
Iwata, T.; Tokutomi, S.; Kandori, H. Photoreaction of the Cysteine S-H Group in the LOV2 Domain of Adiantum Phytochrom3 J. Am. Chem. Soc. 2002, 124, 11840-11841
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 11840-11841
-
-
Iwata, T.1
Tokutomi, S.2
Kandori, H.3
-
23
-
-
25444486111
-
Photocycle features of heterologously expressed and assembled eukaryotic flavin-binding BLUF domains of photoactivated adenylyl cyclase (PAC), a blue-light receptor in Euglena gracilis
-
DOI 10.1039/b505792b
-
Ito, S.; Murakami, A.; Sato, K.; Nishina, Y.; Shiga, K.; Takahashi, T.; Higashi, S.; Iseki, M.; Watanabe, M. Photocycle Features of Heterologously Expressed and Assembled Eukaryotic Flavin-Binding BLUF Domains of Photoactivated Adenylyl Cyclase (PAC), a Blue-Light Receptor in Euglena gracilis Photochem. Photobiol. Sci. 2005, 4, 762-769 (Pubitemid 41367029)
-
(2005)
Photochemical and Photobiological Sciences
, vol.4
, Issue.9
, pp. 762-769
-
-
Ito, S.1
Murakami, A.2
Sato, K.3
Nishina, Y.4
Shiga, K.5
Takahashi, T.6
Higashi, S.7
Iseki, M.8
Watanabe, M.9
-
24
-
-
0033524430
-
Hydrogen bonding interaction between the primary quinone acceptor Q(A) and a histidine side chain in photosystem II as revealed by fourier transform infrared spectroscopy
-
DOI 10.1021/bi982294v
-
A and a Histidine Side Chain in Photosystem II As Revealed by Fourier Transform Infrared Spectroscopy Biochemistry 1999, 38, 399-403 (Pubitemid 29035710)
-
(1999)
Biochemistry
, vol.38
, Issue.1
, pp. 399-403
-
-
Noguchi, T.1
Inoue, Y.2
Tang, X.-S.3
-
25
-
-
0003447441
-
-
Academic Press, San Diego, CA
-
Lin-Vien, D.; Colthup, N. B.; Fateley, W. G.; Grasselli, J. G. The Handbook of Infrared and Raman Characteristic Frequencies of Organic Molecules; Academic Press, San Diego, CA, 1991.
-
(1991)
The Handbook of Infrared and Raman Characteristic Frequencies of Organic Molecules
-
-
Lin-Vien, D.1
Colthup, N.B.2
Fateley, W.G.3
Grasselli, J.G.4
-
26
-
-
18844385503
-
FTIR studies of internal water molecules in the Schiff base region of bacteriorhodopsin
-
DOI 10.1021/bi050122+
-
Shibata, M.; Kandori, H. FTIR Studies of Internal Water Molecules in the Schiff Base Region of Bacteriorhodopsin Biochemistry 2005, 44, 7406-7413 (Pubitemid 40695994)
-
(2005)
Biochemistry
, vol.44
, Issue.20
, pp. 7406-7413
-
-
Shibata, M.1
Kandori, H.2
-
27
-
-
33646549324
-
Internal water molecules of the proton-pumping halorhodopsin in the presence of azide
-
DOI 10.1021/ja060253d
-
Muneda, N.; Shibata, M.; Demura, M.; Kandori, H. Internal Water Molecules of the Proton-Pumping Halorhodopsin in the Presence of Azide J. Am. Chem. Soc. 2006, 128, 6294-6295 (Pubitemid 43727248)
-
(2006)
Journal of the American Chemical Society
, vol.128
, Issue.19
, pp. 6294-6295
-
-
Muneda, N.1
Shibata, M.2
Demura, M.3
Kandori, H.4
-
28
-
-
33748283410
-
Hydrogen-bonding interaction of the protonated Schiff base with halides in a chloride-pumping bacteriorhodopsin mutant
-
DOI 10.1021/bi060555s
-
Shibata, M.; Ihara, K.; Kandori, H. Hydrogen-Bonding Interaction of the Protonated Schiff Base with Halides in a Chloride-Pumping Bacteriorhodopsin Mutant Biochemistry 2006, 45, 10633-10640 (Pubitemid 44320478)
-
(2006)
Biochemistry
, vol.45
, Issue.35
, pp. 10633-10640
-
-
Shibata, M.1
Ihara, K.2
Kandori, H.3
-
29
-
-
34347224775
-
Halide binding by the D212N mutant of bacteriorhodopsin affects hydrogen bonding of water in the active site
-
DOI 10.1021/bi7004224
-
Shibata, M.; Yoshitsugu, M.; Mizuide, N.; Ihara, K.; Kandori, H. Halide Binding by the D212N Mutant of Bacteriorhodopsin Affects Hydrogen Bonding of Water in the Active Site Biochemistry 2007, 46, 7525-7535 (Pubitemid 46992028)
-
(2007)
Biochemistry
, vol.46
, Issue.25
, pp. 7525-7535
-
-
Shibata, M.1
Yoshitsugu, M.2
Mizuide, N.3
Ihara, K.4
Kandori, H.5
-
30
-
-
77950959529
-
Low-Temperature FTIR Study of Gloeobacter rhodopsin: Presence of Strongly Hydrogen-Bonded Water and Long-Range Structural Protein Perturbation upon Retinal Photoisomerization
-
Hashimoto, K.; Choi, A. R.; Furutani, Y.; Jung, K.-H.; Kandori, H. Low-Temperature FTIR Study of Gloeobacter rhodopsin: Presence of Strongly Hydrogen-Bonded Water and Long-Range Structural Protein Perturbation upon Retinal Photoisomerization Biochemistry 2010, 49, 3343-3350
-
(2010)
Biochemistry
, vol.49
, pp. 3343-3350
-
-
Hashimoto, K.1
Choi, A.R.2
Furutani, Y.3
Jung, K.-H.4
Kandori, H.5
-
32
-
-
2942599831
-
Short hydrogen bonds in photoactive yellow protein
-
DOI 10.1107/S090744490400616X
-
Anderson, S.; Crosson, S.; Moffat, K. Short Hydrogen Bonds in Photoactive Yellow Protein Acta Crystallogr., Sect. D: Biol. Crystallogr. 2004, 60, 1008-1016 (Pubitemid 41295439)
-
(2004)
Acta Crystallographica Section D: Biological Crystallography
, vol.60
, Issue.6
, pp. 1008-1016
-
-
Anderson, S.1
Crosson, S.2
Moffat, K.3
-
33
-
-
58849085005
-
Low-Barrier Hydrogen Bond in Photoactive Yellow Protein
-
Yamaguchi, S.; Kamikubo, H.; Kurihara, K.; Kuroi, R.; Niimura, N.; Shimizu, N.; Yamazaki, Y.; Kataoka, M. Low-Barrier Hydrogen Bond in Photoactive Yellow Protein Proc. Natl. Acad. Sci. U.S.A. 2009, 106, 440-444
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 440-444
-
-
Yamaguchi, S.1
Kamikubo, H.2
Kurihara, K.3
Kuroi, R.4
Niimura, N.5
Shimizu, N.6
Yamazaki, Y.7
Kataoka, M.8
-
34
-
-
46749090030
-
On the Signaling Mechanism and the Absence of Photoreversibility in the AppA BLUF Domain
-
Toh, K. C.; van Stokkum, I. H.; Hendriks, J.; Alexandre, M. T.; Arents, J. C.; Perez, M. A.; van Grondelle, R.; Hellingwerf, K. J.; Kennis, J. T. On the Signaling Mechanism and the Absence of Photoreversibility in the AppA BLUF Domain Biophys. J. 2008, 95, 312-321
-
(2008)
Biophys. J.
, vol.95
, pp. 312-321
-
-
Toh, K.C.1
Van Stokkum, I.H.2
Hendriks, J.3
Alexandre, M.T.4
Arents, J.C.5
Perez, M.A.6
Van Grondelle, R.7
Hellingwerf, K.J.8
Kennis, J.T.9
|