Intrinsic DNA curvature of double-crossover tiles

Nanotechnology

Volumn 22, Issue 24, 2011, Pages

  Kim, Seungjae ^a   Kim, Junghoon ^a   Qian, Pengfei ^a   Shin, Jihoon ^b   Amin, Rashid ^b   Ahn, Sang Jung ^c   Labean, Thomas H ^d   Kim, Moon Ki ^a,b   Park, Sung Ha ^a,b,d  

^a Sungkyunkwan University   (South Korea)

^b Sungkyunkwan University   (South Korea)

^c Korea Research Institute of Standards and Science   (South Korea)

^d DUKE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA CURVATURE; DNA TILE; EXPERIMENTAL DATA; HIGHER FREQUENCIES; LATTICE FORMATION; NORMAL MODE ANALYSIS; SINGLE VECTORS; STRUCTURAL DISTORTIONS; THEORETICAL MODELS; THEORETICAL RESULT;

NUCLEIC ACIDS;

DNA;

ARTICLE; ATOMIC FORCE MICROSCOPY; CHEMISTRY; GENETICS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; ULTRASTRUCTURE;

BASE SEQUENCE; DNA; MICROSCOPY, ATOMIC FORCE; MOLECULAR SEQUENCE DATA;

EID: 79955833657     PISSN: 09574484     EISSN: 13616528     Source Type: Journal    
DOI: 10.1088/0957-4484/22/24/245706     Document Type: Article

References (34)

1. Chen J and Seeman N C 1991 Nature 350 631
2. Zhang Y and Seeman N C 1994 J. Am. Chem. Soc. 116 1661
3. Winfree E, Liu F, Wenzler L A and Seeman N C 1998 Nature 394 539
4. Mao C, Sun W and Seeman N C 1999 J. Am. Chem. Soc. 121 5437
5. Mao C, LaBean T H, Reif J H and Seeman N C 2000 Nature 407 493
6. LaBean T H, Yan H, Kopatsch J, Furong L, Winfree E, Reif J H and Seeman N C 2000 J. Am. Chem. Soc. 122 1848
7. Yan H, Park S H, Finkelstein G, Reif J H and LaBean T H 2003 Science 301 1882
8. Liu D, Park S H, Reif J H and LaBean T H 2004 Proc. Natl Acad. Sci. 101 717
9. Park S H, Yin P, Liu Y, Reif J H, LaBean T H and Yan H 2005 Nano Lett. 5 729
10. Park S H, Pistol C, Ahn S J, Reif J H, Lebeck A R, Dwyer C and LaBean T H 2006 Angew. Chem. Int. Edn 45 735
11. Rothemund P W K 2006 Nature 440 297
12. Hamada S and Murata S 2009 Angew. Chem. Int. Edn 121 6952
13. Zheng J, Birktoft J, Chen Y, Wang T, Sha R, Constantinou P, Ginell S, Mao C and Seeman N C 2009 Nature 461 74
14. Park S H, Yan H, Reif J H, LaBean T H and Finkelstein G 2004 Nanotechnology 15 S525
15. Seeman N C 2010 Annu. Rev. Biochem. 79 65 and references herein
16. Fu T and Seeman N C 1993 Biochemistry 32 3211
17. Schulman R and Winfree E 2007 Proc. Natl Acad. Sci. 8 1791
18. Fujibayashi K, Hariadi R, Park S H, Winfree E and Murata S 2007 Nano Lett. 8 1791
19. Rothemund P W K, Ekani-Nkodo A, Papadakis N, Kumar A, Fygenson D K and Winfree E 2004 J. Am. Chem. Soc. 126 16344
20. Sharma J, Chhabra R, Cheng A, Brownell J, Liu Y and Yan H 2009 Science 323 112
21. Liu F, Sha R and Seeman N C 1999 J. Am. Chem. Soc. 121 917
22. Le J D, Pinto Y, Seeman N C, Musier-Forsyth K, Taton T A and Kiehl R A 2004 Nano Lett. 4 2343
23. Berman H M, Olson W K, Beveridge D L, Westbrook J, Gelbin A, Demeny T, Hsieh S-H, Srinivasan A R and Schneider B 1992 Biophys. J. 63 751
24. Konig P and Richmond T J 1993 J. Mol. Biol. 233 139
25. Nagaich A K, Zhurkin V B, Sakamoto H, Gorin A A, Clore G M, Gronenborn A M, Appella E and Harrington R E 1997 J. Biol. Chem. 272 14830
26. Diekmann S 1989 J. Mol. Biol. 205 787
27. Tsai L, Luo L and Sun Z 2002 J. Biomol. Struct. Dyn. 20 127
28. Go N, Noguti T and Nishikawa T 1983 Proc. Natl Acad. Sci. B 80 3696
29. Ben-Avraham D and Tirion M M 1998 Physica A 249 415
30. Tirion M M 1996 Phys. Rev. Lett. 77 1905
31. Kim M K, Chirikjian G S and Jernigan R L 2002 J. Mol. Graph. Model. 21 151
32. Li X, Yang X, Qi J and Seeman N C 1996 J. Am. Chem. Soc. 118 6131
33. Li Z, Liu M, Wang L, Nangreave J, Yan H and Liu Y 2010 J. Am. Chem. Soc. 132 13545
34. Liu W, Zhong H, Wang R and Seeman N C 2011 Angew. Chem. Int. Edn 50 264