Affinity chromatography based on a combinatorial strategy for rerythropoietin purification

ACS Combinatorial Science

Volumn 13, Issue 3, 2011, Pages 251-258

  Martínez Ceron, María C ^a   Marani, Mariela M ^a   Taulés, Marta ^b   Etcheverrigaray, Marina ^c   Albericio, Fernando ^b   Cascone, Osvaldo ^a   Camperi, Silvia A ^a  

^a UNIVERSIDAD DE BUENOS AIRES   (Argentina)

^b UNIVERSITY OF BARCELONA   (Spain)

^c UNIVERSIDAD NACIONAL DEL LITORAL   (Argentina)

Author keywords

affinity chromatography; ChemMatrix resin; one bead one peptide combinatorial libraries; rhEPO; solid phase peptide synthesis; surface plasmon resonance

Indexed keywords

PEPTIDE FRAGMENT; RECOMBINANT ERYTHROPOIETIN;

AFFINITY CHROMATOGRAPHY; AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CHEMISTRY; CHO CELL; COMBINATORIAL CHEMISTRY; CRICETULUS; HAMSTER; ISOLATION AND PURIFICATION; MASS SPECTROMETRY; METHODOLOGY; MOLECULAR GENETICS; PH; THERMODYNAMICS;

AMINO ACID SEQUENCE; ANIMALS; CHO CELLS; CHROMATOGRAPHY, AFFINITY; COMBINATORIAL CHEMISTRY TECHNIQUES; CRICETINAE; CRICETULUS; ERYTHROPOIETIN, RECOMBINANT; HYDROGEN-ION CONCENTRATION; MOLECULAR SEQUENCE DATA; PEPTIDE FRAGMENTS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; THERMODYNAMICS;

EID: 79955832419     PISSN: 21568952     EISSN: None     Source Type: Journal    
DOI: 10.1021/co1000663     Document Type: Article

References (48)

1. Jelkmann, W. Developments in the therapeutic use of erythropoiesis stimulating agents Br. J. Haematol. 2008, 141, 287-297 (Pubitemid 351521144)
2. Goochee, C. F.; Gramer, M. J.; Andersen, D. C.; Bahr, J. C.; Rasmussen, J. R. The oligosaccharides of glycoproteins: bioprocess factors affecting oligosaccharide structure and their effect on glycoprotein properties Biotechnology 1991, 12, 1347-1355
3. Clonis, Y. D. Affinity chromatography matures as bioinformatic and combinatorial tools develop J. Chromatogr. A. 2006, 1101, 1-24 (Pubitemid 41786962)
4. Roque, A. C.; Lowe, C. R. Affinity chromatography: history, perspectives, limitations and prospects Methods Mol. Biol. 2008, 421, 1-21 (Pubitemid 351366024)
5. Subramanian, A. Immunoaffinity chromatography Mol. Biotechnol. 2002, 20, 41-47 (Pubitemid 34113572)
6. Scopes, R. K. Strategies for enzyme isolation using dye-ligand related adsorbents J. Chromatogr. 1986, 376, 131-140 (Pubitemid 16052220)
7. Porath, J. Immobilized metal ion affinity chromatography Protein Expr. Purif. 1992, 3, 263-281
8. Krystal, G.; Pankratz, H. R.; Farber, N. M.; Smart, J. E. Purification of human erythropoietin to homogeneity by a rapid five- step procedure Blood 1986, 67, 71-79 (Pubitemid 16167013)
9. Broudy, V. C.; Tait, J. F.; Powell, J. S. Recombinant human erythropoietin: purification and analysis of carbohydrate linkage Arch. Biochem. Biophys. 1988, 265, 329-336
10. Burg, J.; Schneider, W.; Wrba, A.; Fürst, W.; Sellinger, K. Process for producing erythropoietin containing no animal proteins. 1996. International Publication n° WO/1996/03571.
11. Schumann, C.; Hesse, J.-O.; Mack, M. Method for purifying erythropoietin. 2007, US Patent Application Publication, US2007/0293420 A1.
12. Mellado, M. C. M; Curbelo, D.; Nobrega, R.; Castilho, L. R. Comparison of affinity membrane adsorbers for the purification of recombinant human erythropoietin (rhEPO) J. Chem. Technol. Biotechnol. 2007, 82, 636-645 (Pubitemid 47215152)
13. Wojchowski, D. M.; Sue, J. M.; Sytkowski, A. J. Site-specific antibodies to human erythropoietin: immunoaffinity purification of urinary and recombinant hormone BBA-Protein. Struct M. 1987, 913, 170-178 (Pubitemid 17085204)
14. Wang, Y. F.; Peng, J.; Cai, Y. F.; Ni, Y. M.; Zhao, J. Y.; Cheng, G. X. Preparation and preliminary application of monoclonal antibody against recombinant human erythropoietin Chinese J. Cell. Mol. Immunol. 2004, 20, 696-698
15. Andersson, L.; Sulkowski, E.; Porath, J. Immobilized metal ion affinity chromatography of serum albumins Bioseparation. 1991, 2, 15-22
16. Travis, J.; Bowen, J.; Tewksbury, D.; Johnson, D.; Pannell, R. Isolation of albumin from whole human plasma and fractionation of albumin-depleted plasma Biochem. J. 1976, 157, 301-306
17. Tozzi, C.; Anfossi, L.; Giraudi, G. Affinity chromatography techniques based on the immobilization of peptides exhibiting specific binding activity J. Chromatogr. B. 2003, 797, 289-304 (Pubitemid 37421312)
18. Linhult, M.; Gülich, S.; Hober, S. Affinity ligands for industrial protein purification Protein Pept. Lett. 2005, 12, 305-10 (Pubitemid 40735508)
19. Liu, F. F.; Wang, T.; Dong, X. Y.; Sun, Y. Rational design of affinity peptide ligand by flexible docking simulation J. Chromatogr, A. 2007, 1146, 41-50 (Pubitemid 46356378)
20. Huang, P. Y.; Carbonell, R. G. Affinity purification of proteins using ligands derived from peptide libraries Biotehcnol. Bioeng. 1995, 47, 288-297
21. Lam, K. S.; Salmon, S. E.; Hersh, E. M.; Hruby, V. J.; Kazmierski, W. M. A new type of synthetic peptide library for identifying ligand-binding activity Nature 1991, 354, 82-84 (Pubitemid 21896787)
22. Furka, A.; Sebestyen, F.; Asgedom, M.; Dibo, G. General method for rapid synthesis of multicomponent peptide mixtures Int. J. Peptide Protein Res. 1991, 37, 487-493
23. Houghten, R. A.; Pinilla, C.; Blondelle, S. E.; Appel, J. R.; Dooley, C. T.; Cuervo, J. H. Generation and use of synthetic peptide combinatorial libraries for basic research and drug discovery Nature 1991, 354, 84-86 (Pubitemid 21896788)
24. Lam, K. S.; Lehman, A. L.; Song, A.; Doan, N.; Enstrom, A. M.; Maxwell, J.; Liu, R. Synthesis and screening of "one-bead one-compound" combinatorial peptide libraries. In Methods Enzymol., Morales, G. A.; Bunin, B. A., Eds.; Academic Press: New York, 2003; Vol. 369; pp: 298-322. (Pubitemid 38002113)
25. Camperi, S. A.; Marani, M. M.; Iannucci, N. B.; Cote, S.; Albericio, F.; Cascone, O. An Efficient Strategy for the Preparation of One-Bead-One-Peptide Libraries on a New Biocompatible Solid Support Tetrahedron letters 2005, 46, 1561-1564 (Pubitemid 40215064)
26. Marani, M. M.; Oliveira, E.; Côte, S.; Camperi, S. A.; Cascone, O.; Albericio, F. Identification of protein-binding peptides by direct MALDI-TOF-MS analysis of peptide beads selected from the screening of one-bead-one peptide combinatorial libraries Anal. Biochem. 2007, 370, 215-222 (Pubitemid 47496117)
27. Marani, M. M.; Martínez-Ceron, M. C.; Giudicessi, S. L.; Oliveira, E.; Côte, S.; Erra-Balsells, R.; Albericio, F.; Cascone, O.; Camperi, S. A. Screening of one-bead-one-peptide combinatorial library using red fluorescent dyes. Presence of positive and false positive beads J. Comb. Chem. 2009, 11, 146-150
28. Martínez-Ceron, M. C.; Giudicessi, S. L.; Marani, M. M.; Albericio, F.; Cascone, O.; Erra-Balsells, R.; Camperi, S. A. Improving sample preparation for sequencing hits from one-bead one-peptide combinatorial libraries by MALDI-TOF/TOF MS Anal. Biochem. 2010, 400, 295-297
29. Garcia-Martin, F.; Quintanar-Audelo, M.; Garcia-Ramos, Y.; Cruz, L. J.; Gravel, C.; Furic, R.; Cote, S.; Tulla-Puche, J.; Albericio, F. ChemMatrix, a Poly(ethylene glycol)-Based Support for the Solid-Phase Synthesis of Complex Peptides J. Comb. Chem. 2006, 8, 213-220 (Pubitemid 43503929)
30. Camperi, S. A.; Iannucci, N. B.; Albanesi, G. J.; Oggero Eberhardt, M.; Etcheverrigaray, M.; Albericio, F.; Messeguer, A.; Cascone, O. Monoclonal antibody purification by affinity chromatography with ligands derived from the screening of peptide combinatory libraries Biotechnol. Lett. 2003, 25, 1545-1548 (Pubitemid 37181452)
31. Cascone, O.; Iannucci, N. B.; Camperi, S. A.; Miranda, M. V. Un método para extraer y purificar una proteína de cáscaras de semillas de soja (Glycine max). 2009. Acta INPI: N° P 09 0101603.
32. Marani, M. M.; Etcheverrigaray, M.; Albericio, F.; Cascone, O.; Camperi, S. A. Short peptide ligands for affinity purification of recombinant erythropoietin. Proceedings of the 42th Annual Meeting of the Argentine Society for Biochemistry and Molecular Biology, Rosario, Santa Fe, Argentina, 2006; p 77; URL: http://www.saib.org.ar/paginas/2006/interiorlibro2006.pdf (accessed February 2011).
33. Àrpàd, F. Chemical synthesis of peptide libraries. In Combinatorial peptide and nonpeptide libraries: A Handbook.; Günther., J., Ed.; VCH Verlagsgesellschaft mbH: Weinheim, Germany, 1995; pp 111-137.
34. Lam, K. S.; Lebl, M. Streptavidin and avidin recognize peptide ligands with different motifs Immunol. Methods 1992, 1, 11-15
35. Tudos, A. J.; Schasfoort, R. B. M. Introduction to surfaces plasmon resonance. In Handbook of surface Plasmon resonance; Schasfoort, R. B. M.; Tudos, A. J., Eds.; The Royal Society of Chemistry: Cambridge, U.K., 2008; pp 1-13.
36. Amadeo, I.; Oggero, M.; Zenclussen, M. L.; Robles, L.; Pereira, D.; Kratje, R.; Etcheverrigaray, M. A single monoclonal antibody as probe to detect the entire set of native and partially unfolded rhEPO glycoforms J. Immunol. Methods. 2004, 293, 191-205 (Pubitemid 39468343)
37. Egrie, J. C.; Grant, J. R.; Gillies, D. K.; Aoki, K. H.; Strickland, T. W. The role of carbohydrate on the biological activity of erythropoietin Glycoconjugate J. 1993, 10, 263-269
38. Biacore Sensor Surface handbook. GE Healthcare, BR-1005-71 Edition AB; pp 33-56; URL: http://www.biacore.com/lifesciences/service/downloads/Handbooks/ index.html (accessed November 2010).
39. Hermanson, G. T.; Mallia, A. K.; Smith, P. K. Immobilization of ligands. In Immobilized affinity ligand techniques. Hermanson, G. T.; Mallia, A. K.; Smith, P. K., Eds.; Academic Press Inc: New York, 1992; pp 137-279.
40. Carlsson, J.; Janson, J. C.; Sparman, M. Affinity chromatography. In Protein Purification, 2 nd ed.; Janson, J. C.; Rydén, L., Eds.; Wiley: New York, 1998; pp 375-442.
41. Mellor, S. L.; Wellings, D. A.; Fehrentz, J. A.; Paris, M.; Martinez, J.; Ede, N. J.; Bray, A. M.; Evans, D. J.; Bloomberg, G. B. Synthesis of modified peptides. In Fmoc Solid Phase Peptide Synthesis. A Practical Approach; Chan, W. C.; White, P. D., Eds.; Oxford University Press: New York, 2000; pp 137-181.
42. Invitrogen. URL: http://probes.invitrogen.com/handbook/ (accessed February 2011).
43. Biotin Labeling Reagents. URL: http://www.piercenet.com (accessed February 2011).
44. Union Biometrica. URL: http://www.unionbio.com (accessed February 2011).
45. Christensen, C.; Groth, T.; Schiødt, C. B.; Foged, N. T.; Meldal, M. Automated Sorting of Beads from a "One-Bead-Two-Compounds" Combinatorial Library of Metalloproteinase Inhibitors QSAR Comb. Sci. 2003, 22, 737-744 (Pubitemid 37391071)
46. Chan, W. C.; White, P. D. Basic principles. In Fmoc solid phase peptide synthesis. A practical approach.; Chan, W. C.; White, P. D., Eds.; Oxford University Press: New York, 2000; pp 41-74.
47. Chase, H. A. Prediction of the performance of preparative affinity chromatography J. Chromatogr. 1984, 297, 179-202
48. Laemmli, U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 1970, 227, 680-687