Identification of pluripotency genes in the fish medaka

International Journal of Biological Sciences

Volumn 7, Issue 4, 2011, Pages 440-451

  Wang, Danke ^a   Manali, Dwarakanath ^a   Wang, Tiansu ^a   Bhat, Narayani ^a   Hong, Ni ^a   Li, Zhendong ^a   Wang, Li ^a   Yan, Yan ^a   Liu, Rong ^a   Hong, Yunhan ^a  

^a NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

Medaka; Nanog; Oct4; Pluripotency; Stem cells; Tcf3

Indexed keywords

MAMMALIA; ORYZIINAE; VERTEBRATA;

EID: 79955781510     PISSN: 14492288     EISSN: None     Source Type: Journal    
DOI: 10.7150/ijbs.7.440     Document Type: Article

References (56)

1. Wobus AM, Boheler KR. Embryonic stem cells: prospects for developmental biology and cell therapy. Physiol Rev 2005; 85: 635-678.
2. Evans MJ, Kaufman MH. Establishment in culture of pluripo-tential cells from mouse embryos. Nature 1981; 292: 154-156.
3. Martin GR. Isolation of a pluripotent cell line from early mouse embryos cultured in medium conditioned by teratocarcinoma stem cells. Proc Natl Acad Sci USA 1981; 78: 7634-7638.
4. Munoz M, Trigal B, Molina I, Diez C, Caamano JN, et al. Constraints to progress in embryonic stem cells from domestic species. Stem Cell Rev 2009; 5: 6-9.
5. Yi M, Hong N, Li Z, Yan Y, Wang D, et al. Medaka fish stem cells and their applications. Sci China Life Sci 2010;53: 426-434.
6. Hong Y, Winkler C, Schartl M. Pluripotency and differentiation of embryonic stem cell lines from the medakafish (Oryzias latipes). Mech Dev 1996; 60: 33-44.
7. Thomson JA, Itskovitz-Eldor J, Shapiro SS, Waknitz MA, Swiergiel JJ, et al. Embryonic stem cell lines derived from human blastocysts. Science 1998; 282: 1145-1147.
8. Takahashi K, Yamanaka S. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 2006; 126: 663-676.
9. Hong N, Li Z, Hong Y. Fish Stem Cell Cultures. Int J Biol Sci 2011; 7:392-402.
10. Ma C, Fan L, Ganassin R, Bols N, Collodi P. Production of zebrafish germ-line chimeras from embryo cell cultures. Proc Natl Acad Sci USA 2001; 98: 2461-2466.
11. Boyer LA, Lee TI, Cole MF, Johnstone SE, Levine SS, et al. Core transcriptional regulatory circuitry in human embryonic stem cells. Cell 2005; 122: 947-956.
12. Loh YH, Wu Q, Chew JL, Vega VB, Zhang W, et al. The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells. Nat Genet 2006; 38: 431-440.
13. Pesce M, Wang X, Wolgemuth DJ, Scholer H. Differential expression of the Oct-4 transcription factor during mouse germ cell differentiation. Mech Dev 1998; 71: 89-98.
14. Niwa H, Miyazaki J, Smith AG. Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells. Nat Genet 2000; 24: 372-376.
15. Avilion AA, Nicolis SK, Pevny LH, Perez L, Vivian N, et al. Multipotent cell lineages in early mouse development depend on SOX2 function. Genes Dev 2003; 17: 126-140.
16. Western P, Maldonado-Saldivia J, van den Bergen J, Hajkova P, Saitou M, et al. Analysis of Esg1 expression in pluripotent cells and the germline reveals similarities with Oct4 and Sox2 and differences between human pluripotent cell lines. Stem Cells 2005; 23: 1436-1442.
17. Perrett RM, Turnpenny L, Eckert JJ, O'Shea M, Sonne SB, et al. The early human germ cell lineage does not express SOX2 during in vivo development or upon in vitro culture. Biol Re-prod 2008; 78: 852-858.
18. Cavaleri F, Scholer HR. Nanog: a new recruit to the embryonic stem cell orchestra. Cell 2003; 113: 551-552.
19. Chambers I, Colby D, Robertson M, Nichols J, Lee S, et al. Functional expression cloning of Nanog, a pluripotency sustaining factor in embryonic stem cells. Cell 2003; 113: 643-655.
20. Dejosez M, Krumenacker JS, Zitur LJ, Passeri M, Chu LF, et al. Ronin is essential for embryogenesis and the pluripotency of mouse embryonic stem cells. Cell 2008; 133: 1162-1174.
21. Lim CY, Tam WL, Zhang J, Ang HS, Jia H, et al. Sall4 regulates distinct transcription circuitries in different blastocyst-derived stem cell lineages. Cell Stem Cell 2008; 3: 543-554.
22. Tsubooka N, Ichisaka T, Okita K, Takahashi K, Nakagawa M, et al. Roles of Sall4 in the generation of pluripotent stem cells from blastocysts and fibroblasts. Genes Cells 2009; 14: 683-694.
23. Cole MF, Johnstone SE, Newman JJ, Kagey MH, Young RA. Tcf3 is an integral component of the core regulatory circuitry of embryonic stem cells. Genes Dev 2008; 22: 746-755.
24. Tam WL, Lim CY, Han J, Zhang J, Ang YS, et al. T-cell factor 3 regulates embryonic stem cell pluripotency and self-renewal by the transcriptional control of multiple lineage pathways. Stem Cells 2008; 26: 2019-2031.
25. Wang ZX, Teh CH, Chan CM, Chu C, Rossbach M, et al. The transcription factor Zfp281 controls embryonic stem cell plu-ripotency by direct activation and repression of target genes. Stem Cells 2008; 26: 2791-2799.
26. Wittbrodt J, Shima A, Schartl M. Medaka--a model organism from the far East. Nat Rev Genet 2002; 3: 53-64.
27. Hong Y, Winkler C, Schartl M. Production of medakafish chimeras from a stable embryonic stem cell line. Proc Natl Acad Sci USA 1998; 95: 3679-3684.
28. Hong Y, Liu T, Zhao H, Xu H, Wang W, et al. Establishment of a normal medakafish spermatogonial cell line capable of sperm production in vitro. Proc Natl Acad Sci USA 2004; 101: 8011-8016.
29. Yi M, Hong N, Hong Y. Generation of medaka fish haploid embryonic stem cells. Science 2009; 326: 430-433.
30. Yi M, Hong N, Hong Y. Derivation and characterization of haploid embryonic stem cell cultures in medaka fish. Nat Pro-toc 2010; 5: 1418-1430.
31. Li Z, Bhat N, Manali D, Wang D, Hong N, Yi M, Ge R, Hong Y. Medaka Cleavage Embryos Are Capable of Generating ES-Like Cell Cultures. Int J Biol Sci 2011; 7:418-425
32. Kim CH, Oda T, Itoh M, Jiang D, Artinger KB, et al. Repressor activity of Headless/Tcf3 is essential for vertebrate head formation. Nature 2000; 407: 913-916.
33. Dorsky RI, Itoh M, Moon RT, Chitnis A. Two tcf3 genes cooperate to pattern the zebrafish brain. Development 2003; 130: 1937-1947.
34. Aizawa K, Shimada A, Naruse K, Mitani H, Shima A. The medaka midblastula transition as revealed by the expression of the paternal genome. Gene Expr Patterns 2003; 3: 43-47.
35. Pesce M, Gross MK, Scholer HR. In line with our ancestors: Oct-4 and the mammalian germ. Bioessays 1998; 20: 722-732.
36. Guan K, Nayernia K, Maier LS, Wagner S, Dressel R, et al. Plu-ripotency of spermatogonial stem cells from adult mouse testis. Nature 2006; 440: 1199-1203.
37. Liu L, Hong N, Xu H, Li M, Yan Y, et al. Medaka dead end encodes a cytoplasmic protein and identifies embryonic and adult germ cells. Gene Expr Patterns. 2009 Oct;9(7):541-8
38. Xu H, Li Z, Li M, Wang L, Hong Y. Boule is present in fish and bisexually expressed in adult and embryonic germ cells of medaka. PLoS One 2009;4: e6097.
39. Iwamatsu T, Ohta T, Oshima E, N S. Oogeneis in the Medaka Oryzias latipes -- Stage of Oocyte Development. Zoological science 1988; 5: 353-373.
40. Hong N, Li M, Zeng Z, Yi M, Deng J, et al. Accessibility of host cell lineages to medaka stem cells depends on genetic background and irradiation of recipient embryos. Cell Mol Life Sci. 2010;67(7):1189-1202.
41. Araki K, Okamoto H, Graveson AC, Nakayama I, Nagoya H. Analysis of haploid development based on expression patterns of developmental genes in the medaka Oryzias latipes. Dev Growth Differ 2001; 43: 591-599.
42. Amores A, Force A, Yan YL, Joly L, Amemiya C, et al. Zebrafish hox clusters and vertebrate genome evolution. Science 1998; 282: 1711-1714.
43. Camp E, Sanchez-Sanchez AV, Garcia-Espana A, Desalle R, Odqvist L, et al. Nanog regulates proliferation during early fish development. Stem Cells 2009; 27: 2081-2091.
44. Sanchez-Sanchez AV, Camp E, Garcia-Espana A, Leal-Tassias A, Mullor JL. Medaka Oct4 is expressed during early embryo development, and in primordial germ cells and adult gonads. Dev Dyn 2010;239: 672-679.
45. Sanchez-Sanchez AV, Camp E, Garcia-Espana A, Leal-Tassias A, Mullor JL. Medaka Oct4 is expressed during early embryo development, and in primordial germ cells and adult gonads. Dev Dyn 2010; 239: 672-679.
46. Burgess S, Reim G, Chen W, Hopkins N, Brand M. The zebrafish spiel-ohne-grenzen (spg) gene encodes the POU domain protein Pou2 related to mammalian Oct4 and is essential for formation of the midbrain and hindbrain, and for pre-gastrula morphogenesis. Development 2002; 129: 905-916.
47. Lunde K, Belting HG, Driever W. Zebrafish pou5f1/pou2, homolog of mammalian Oct4, functions in the endoderm specification cascade. Curr Biol 2004; 14: 48-55.
48. Luo DJ, Hu W, Chen SP, Zhu ZY. Critical Developmental Stages for the Efficiency of Somatic Cell Nuclear Transfer in Zebrafish. Int J Biol Sci 2011; 7:476-486
49. Ema M, Mori D, Niwa H, Hasegawa Y, Yamanaka Y, et al. Kruppel-like factor 5 is essential for blastocyst development and the normal self-renewal of mouse ESCs. Cell Stem Cell 2008; 3: 555-567.
50. Hong Y, Winkler C, Liu T, Chai G, Schartl M. Activation of the mouse Oct4 promoter in medaka embryonic stem cells and its use for ablation of spontaneous differentiation. Mech Dev 2004; 121: 933-943.
51. Li M, Hong N, Xu H, Yi M, Li C, et al. Medaka vasa is required for migration but not survival of primordial germ cells. Mech Dev 2009; 126: 366-381.
52. Iwamatsu T. Stages of normal development in the medaka Oryzias latipes. Mech Dev 2004; 121: 605-618.
53. Liu R. Isolation and characterization of stem cell regulatory genes oct4 and stat3 from the model fish medaka (Oryzias latipes). Singapore: National University of Singapore Doctoral thesis. 2008
54. Li Z. Nanog in the twin fish models medaka and zebrafish: Functional divergence or pleiotropy of vertebrate pluripotency gene? Singapore: National University of Singapore Doctoral thesis. 2009
55. Sánchez-Sánchez AV, Camp E, Mullor JL. Fishing Pluripotency Mechanisms In Vivo. Int J Biol Sci 2011; 7:410-417
56. Rao F, Wang T, Li M, Li Z, et al. Medaka tert produces multiple variants with differential expression during differentiation in vitro and in vivo. Int J Biol Sci. 2011; 7(4): 426-439.