-
1
-
-
0004134188
-
The genetic code: The molecular basis for genetic expression
-
New York, Harper & Row
-
Woese CR, (1967) The genetic code: The molecular basis for genetic expression. New York Harper & Row.
-
(1967)
-
-
Woese, C.R.1
-
2
-
-
0014378880
-
The origin of the genetic code
-
Crick FH, (1968) The origin of the genetic code. J Mol Biol 38: 367-379.
-
(1968)
J Mol Biol
, vol.38
, pp. 367-379
-
-
Crick, F.H.1
-
3
-
-
0014369024
-
Evolution of the genetic apparatus
-
Orgel LE, (1968) Evolution of the genetic apparatus. J Mol Biol 38: 381-393.
-
(1968)
J Mol Biol
, vol.38
, pp. 381-393
-
-
Orgel, L.E.1
-
4
-
-
0026466830
-
Identifying constraints on the higher- order structure of RNA: continued development and application of comparative sequence analysis methods
-
Gutell RR, Power A, Hertz GZ, Putz EJ, Stormo GD, (1992) Identifying constraints on the higher- order structure of RNA: continued development and application of comparative sequence analysis methods. Nucleic Acids Res 20: 5785-5795.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 5785-5795
-
-
Gutell, R.R.1
Power, A.2
Hertz, G.Z.3
Putz, E.J.4
Stormo, G.D.5
-
5
-
-
0028272315
-
RNA sequence analysis using covariance models
-
Eddy SR, Durbin R, (1994) RNA sequence analysis using covariance models. Nucleic Acids Res 22: 2079-2088.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 2079-2088
-
-
Eddy, S.R.1
Durbin, R.2
-
6
-
-
0034405491
-
A story: unpaired adenosine bases in ribosomal RNAs
-
Gutell RR, Cannone JJ, Shang Z, Du Y, Serra MJ, (2000) A story: unpaired adenosine bases in ribosomal RNAs. J Mol Biol 304: 335-354.
-
(2000)
J Mol Biol
, vol.304
, pp. 335-354
-
-
Gutell, R.R.1
Cannone, J.J.2
Shang, Z.3
Du, Y.4
Serra, M.J.5
-
7
-
-
0025047647
-
Architecture of ribosomal RNA: Constraints on the sequence of \tetra-loops
-
Woese CR, Winker S, Gutell RR, (1990) Architecture of ribosomal RNA: Constraints on the sequence of \tetra-loops. Proc Natl Acad Sci USA 87: 8467-8471.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 8467-8471
-
-
Woese, C.R.1
Winker, S.2
Gutell, R.R.3
-
8
-
-
0034268836
-
Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution
-
Schluenzen F, Tocilj A, Zarivach R, Harms J, Gluehmann M, et al. (2000) Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution. Cell 102: 615-623.
-
(2000)
Cell
, vol.102
, pp. 615-623
-
-
Schluenzen, F.1
Tocilj, A.2
Zarivach, R.3
Harms, J.4
Gluehmann, M.5
-
9
-
-
0034637111
-
The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution
-
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA, (2000) The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution. Science 289: 905-920.
-
(2000)
Science
, vol.289
, pp. 905-920
-
-
Ban, N.1
Nissen, P.2
Hansen, J.3
Moore, P.B.4
Steitz, T.A.5
-
10
-
-
0034699518
-
Structure of the 30S ribosomal subunit
-
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, et al. (2000) Structure of the 30S ribosomal subunit. Nature 407: 327-339.
-
(2000)
Nature
, vol.407
, pp. 327-339
-
-
Wimberly, B.T.1
Brodersen, D.E.2
Clemons Jr., W.M.3
Morgan-Warren, R.J.4
Carter, A.P.5
-
11
-
-
0036600570
-
The accuracy of ribosomal RNA comparative structure models
-
Gutell RR, Lee JC, Cannone JJ, (2002) The accuracy of ribosomal RNA comparative structure models. Curr Opin Struct Biol 12: 301-310.
-
(2002)
Curr Opin Struct Biol
, vol.12
, pp. 301-310
-
-
Gutell, R.R.1
Lee, J.C.2
Cannone, J.J.3
-
12
-
-
0000039053
-
Preadaptation and multiple evolutionary pathways
-
Bock WJ, (1959) Preadaptation and multiple evolutionary pathways. Evolution 13: 194-211.
-
(1959)
Evolution
, vol.13
, pp. 194-211
-
-
Bock, W.J.1
-
14
-
-
2942571539
-
The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
-
Cannone JJ, Subramanian S, Schnare MN, Collett JR, D'Souza LM, Du Y, et al. (2002) The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics 3: 15.
-
(2002)
BMC Bioinformatics
, vol.3
, pp. 15
-
-
Cannone, J.J.1
Subramanian, S.2
Schnare, M.N.3
Collett, J.R.4
D'Souza, L.M.5
Du, Y.6
-
15
-
-
36749028922
-
Tensor higher-order singular value decomposition for integrative analysis of DNA microarray data from different studies
-
Omberg L, Golub GH, Alter O, (2007) Tensor higher-order singular value decomposition for integrative analysis of DNA microarray data from different studies. Proc Natl Acad Sci USA 104: 18371-18376.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 18371-18376
-
-
Omberg, L.1
Golub, G.H.2
Alter, O.3
-
16
-
-
73149099424
-
Global effects of DNA replication and DNA replication origin activity on eukaryotic gene expression
-
Omberg L, Meyerson JR, Kobayashi K, Drury LS, Diffey JF, et al. (2009) Global effects of DNA replication and DNA replication origin activity on eukaryotic gene expression. Mol Syst Biol 5: 312.
-
(2009)
Mol Syst Biol
, vol.5
, pp. 312
-
-
Omberg, L.1
Meyerson, J.R.2
Kobayashi, K.3
Drury, L.S.4
Diffey, J.F.5
-
17
-
-
0004236492
-
Matrix Computations
-
Baltimore, Johns Hopkins University Press, third edition
-
Golub GH, Van Loan CF, (1996) Matrix Computations. Baltimore Johns Hopkins University Press third edition.
-
(1996)
-
-
Golub, G.H.1
van Loan, C.F.2
-
18
-
-
0034730140
-
Singular value decomposition for genome-wide expression data processing and modeling
-
Alter O, Brown PO, Botstein D, (2000) Singular value decomposition for genome-wide expression data processing and modeling. Proc Natl Acad Sci USA 97: 10101-10106.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 10101-10106
-
-
Alter, O.1
Brown, P.O.2
Botstein, D.3
-
19
-
-
75549088687
-
Database resources of the National Center for Biotechnology Information
-
Sayers EW, Barrett T, Benson DA, Bolton E, Bryant SH, et al. (2010) Database resources of the National Center for Biotechnology Information. Nucleic Acids Res 38: D5-D16.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Sayers, E.W.1
Barrett, T.2
Benson, D.A.3
Bolton, E.4
Bryant, S.H.5
-
20
-
-
0029796982
-
RNA tertiary structure mediation by adenosine platforms
-
Cate JH, Gooding AR, Podell E, Zhou K, Golden BL, et al. (1996) RNA tertiary structure mediation by adenosine platforms. Science 273: 1696-1699.
-
(1996)
Science
, vol.273
, pp. 1696-1699
-
-
Cate, J.H.1
Gooding, A.R.2
Podell, E.3
Zhou, K.4
Golden, B.L.5
-
21
-
-
0035073865
-
A universal mode of helix packing in RNA
-
Doherty EA, Batey RT, Masquida B, Doudna JA, (2001) A universal mode of helix packing in RNA. Nat Struct Biol 8: 339-343.
-
(2001)
Nat Struct Biol
, vol.8
, pp. 339-343
-
-
Doherty, E.A.1
Batey, R.T.2
Masquida, B.3
Doudna, J.A.4
-
22
-
-
0035942248
-
RNA tertiary interactions in the large ribosomal subunit: The A-minor motif
-
Nissen P, Ippolito JA, Ban N, Moore PB, Steitz TA, (2001) RNA tertiary interactions in the large ribosomal subunit: The A-minor motif. Proc Natl Acad Sci USA 98: 4899-4903.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 4899-4903
-
-
Nissen, P.1
Ippolito, J.A.2
Ban, N.3
Moore, P.B.4
Steitz, T.A.5
-
23
-
-
0035805229
-
Recognition of cognate transfer RNA by the 30S ribosomal subunit
-
Ogle JM, Brodersen DE, ClemonsWMJr, Tarry MJ, Carter AP, et al. (2001) Recognition of cognate transfer RNA by the 30S ribosomal subunit. Science 292: 897-902.
-
(2001)
Science
, vol.292
, pp. 897-902
-
-
Ogle, J.M.1
Brodersen, D.E.2
Clemons Jr., W.M.3
Tarry, M.J.4
Carter, A.P.5
-
24
-
-
0042415065
-
Structural basis for contrasting activities of ribosome binding thiazole antibiotics
-
Lentzen G, Klinck R, Matassova N, Aboul-ela F, Murchie AI, (2003) Structural basis for contrasting activities of ribosome binding thiazole antibiotics. Chem Biol 10: 769-778.
-
(2003)
Chem Biol
, vol.10
, pp. 769-778
-
-
Lentzen, G.1
Klinck, R.2
Matassova, N.3
Aboul-ela, F.4
Murchie, A.I.5
-
25
-
-
11144311174
-
Single-stranded adenine-rich DNA and RNA retain structural characteristics of their respective double-stranded conformations and show directional differences in stacking pattern
-
Isaksson J, Acharya S, Barman J, Cheruku P, Chattopadhyaya J, (2004) Single-stranded adenine-rich DNA and RNA retain structural characteristics of their respective double-stranded conformations and show directional differences in stacking pattern. Biochemistry 43: 15996-16010.
-
(2004)
Biochemistry
, vol.43
, pp. 15996-16010
-
-
Isaksson, J.1
Acharya, S.2
Barman, J.3
Cheruku, P.4
Chattopadhyaya, J.5
-
26
-
-
27944442879
-
Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA
-
Lancaster L, Noller HF, (2004) Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA. Mol Cell 20: 623-632.
-
(2004)
Mol Cell
, vol.20
, pp. 623-632
-
-
Lancaster, L.1
Noller, H.F.2
-
27
-
-
0023150599
-
Ribosomal RNA sequence suggests microsporidia are extremely ancient eukaryotes
-
Vossbrinck CR, Maddox JV, Friedman S, Debrunner-Vossbrinck BA, Woese CR, (1987) Ribosomal RNA sequence suggests microsporidia are extremely ancient eukaryotes. Nature 326: 411-414.
-
(1987)
Nature
, vol.326
, pp. 411-414
-
-
Vossbrinck, C.R.1
Maddox, J.V.2
Friedman, S.3
de Brunner-Vossbrinck, B.A.4
Woese, C.R.5
-
28
-
-
0033582323
-
Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins
-
Hirt RP, Logsdon JM Jr, Healy B, Dorey MW, Doolittle WF, et al. (1999) Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins. Proc Natl Acad Sci USA 96: 580-585.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 580-585
-
-
Hirt, R.P.1
Logsdon Jr., J.M.2
Healy, B.3
Dorey, M.W.4
Doolittle, W.F.5
-
29
-
-
0034602344
-
A kingdom-level phylogeny of eukaryotes based on combined protein data
-
Baldauf SL, Roger AJ, Wenk-Siefert I, Doolittle WF, (2000) A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 290: 972-977.
-
(2000)
Science
, vol.290
, pp. 972-977
-
-
Baldauf, S.L.1
Roger, A.J.2
Wenk-Siefert, I.3
Doolittle, W.F.4
-
30
-
-
0025300402
-
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya
-
Woese CR, Kandler O, Wheelis ML, (1990) Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc Natl Acad Sci USA 87: 4576-4569.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 4576-4569
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
31
-
-
0026050670
-
A de_nition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics
-
Winker S, Woese CR, (1991) A de_nition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics. Syst Appl Microbiol 14: 305-310.
-
(1991)
Syst Appl Microbiol
, vol.14
, pp. 305-310
-
-
Winker, S.1
Woese, C.R.2
-
32
-
-
33750808399
-
Discovery of principles of nature from mathematical modeling of DNA microarray data
-
Alter O, (2006) Discovery of principles of nature from mathematical modeling of DNA microarray data. Proc Natl Acad Sci USA 103: 16063-16064.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 16063-16064
-
-
Alter, O.1
-
33
-
-
0032522299
-
The use of sequence comparison to detect 'identities' in tRNA genes
-
Sagara JI, Shimizu S, Kawabata T, Nakamura S, Ikeguchi M, et al. (1998) The use of sequence comparison to detect 'identities' in tRNA genes. Nucleic Acids Res 26: 1974-1979.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 1974-1979
-
-
Sagara, J.I.1
Shimizu, S.2
Kawabata, T.3
Nakamura, S.4
Ikeguchi, M.5
-
34
-
-
70849133998
-
On relationships between uncentered and column-centered principal component analysis
-
Cadima J, Jolliffe I, (2009) On relationships between uncentered and column-centered principal component analysis. Pak J Statist 25: 473-503.
-
(2009)
Pak J Statist
, vol.25
, pp. 473-503
-
-
Cadima, J.1
Jolliffe, I.2
-
35
-
-
0033028596
-
Systematic determination of genetic network architecture
-
Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM, (1999) Systematic determination of genetic network architecture. Nat Genet 22: 281-285.
-
(1999)
Nat Genet
, vol.22
, pp. 281-285
-
-
Tavazoie, S.1
Hughes, J.D.2
Campbell, M.J.3
Cho, R.J.4
Church, G.M.5
-
36
-
-
9344230857
-
Integrative analysis of genome-scale data by using pseudoinverse projection predicts novel correlation between DNA replication and RNA transcription
-
Alter O, Golub GH, (2004) Integrative analysis of genome-scale data by using pseudoinverse projection predicts novel correlation between DNA replication and RNA transcription. Proc Natl Acad Sci USA 101: 16577-16582.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 16577-16582
-
-
Alter, O.1
Golub, G.H.2
|