-
1
-
-
33846526208
-
A critical role for peptidoglycan N-deacetylation in listeria evasion from the host innate immune system
-
Boneca IG, Dussurget O, Cabanes D, Nahori MA, Sousa S, et al. (2007) A critical role for peptidoglycan N-deacetylation in listeria evasion from the host innate immune system. Proc Natl Acad Sci U S A 104 (3): 997-1002.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, Issue.3
, pp. 997-1002
-
-
Boneca, I.G.1
Dussurget, O.2
Cabanes, D.3
Nahori, M.A.4
Sousa, S.5
-
2
-
-
33244472793
-
Signalling pathways and molecular interactions of NOD1 and NOD2
-
Strober W, Murray PJ, Kitani A, Watanabe T, (2006) Signalling pathways and molecular interactions of NOD1 and NOD2. Nat Rev Immunol 6 (1): 9-20.
-
(2006)
Nat Rev Immunol
, vol.6
, Issue.1
, pp. 9-20
-
-
Strober, W.1
Murray, P.J.2
Kitani, A.3
Watanabe, T.4
-
3
-
-
33746028777
-
Intracellular pattern recognition receptors in the host response
-
Meylan E, Tschopp J, Karin M, (2006) Intracellular pattern recognition receptors in the host response. Nature 442 (7098): 39-44.
-
(2006)
Nature
, vol.442
, Issue.7098
, pp. 39-44
-
-
Meylan, E.1
Tschopp, J.2
Karin, M.3
-
4
-
-
78049430106
-
Peptidoglycan deacetylation in Helicobacter pylori contributes to bacterial survival by mitigating host immune responses
-
Wang G, Maier SE, Lo LF, Maier G, Dosi S, et al. (2010) Peptidoglycan deacetylation in Helicobacter pylori contributes to bacterial survival by mitigating host immune responses. Infect Immun 78 (11): 4660-4666.
-
(2010)
Infect Immun
, vol.78
, Issue.11
, pp. 4660-4666
-
-
Wang, G.1
Maier, S.E.2
Lo, L.F.3
Maier, G.4
Dosi, S.5
-
5
-
-
65449142126
-
Oxidative stress-induced peptidoglycan deacetylase in Helicobacter pylori
-
Wang G, Olczak A, Forsberg LS, Maier RJ, (2009) Oxidative stress-induced peptidoglycan deacetylase in Helicobacter pylori. J Biol Chem 284 (11): 6790-6800.
-
(2009)
J Biol Chem
, vol.284
, Issue.11
, pp. 6790-6800
-
-
Wang, G.1
Olczak, A.2
Forsberg, L.S.3
Maier, R.J.4
-
6
-
-
27344441825
-
Structure and metal-dependent mechanism of peptidoglycan deacetylase, a streptococcal virulence factor
-
Blair DE, Schuttelkopf AW, MacRae JI, van Aalten DM, (2005) Structure and metal-dependent mechanism of peptidoglycan deacetylase, a streptococcal virulence factor. Proc Natl Acad Sci U S A 102 (43): 15429-15434.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, Issue.43
, pp. 15429-15434
-
-
Blair, D.E.1
Schuttelkopf, A.W.2
MacRae, J.I.3
van Aalten, D.M.4
-
7
-
-
70349523051
-
Delineation of a carcinogenic Helicobacter pylori proteome
-
Franco AT, Friedman DB, Nagy TA, Romero-Gallo J, Krishna U, et al. (2009) Delineation of a carcinogenic Helicobacter pylori proteome. Mol Cell Proteomics 8 (8): 1947-1958.
-
(2009)
Mol Cell Proteomics
, vol.8
, Issue.8
, pp. 1947-1958
-
-
Franco, A.T.1
Friedman, D.B.2
Nagy, T.A.3
Romero-Gallo, J.4
Krishna, U.5
-
8
-
-
49549135300
-
Atomic coordinates for triose phosphate isomerase from chicken muscle
-
Banner DW, Bloomer A, Petsko GA, Phillips DC, Wilson IA, (1976) Atomic coordinates for triose phosphate isomerase from chicken muscle. Biochem Biophys Res Commun 72 (1): 146-155.
-
(1976)
Biochem Biophys Res Commun
, vol.72
, Issue.1
, pp. 146-155
-
-
Banner, D.W.1
Bloomer, A.2
Petsko, G.A.3
Phillips, D.C.4
Wilson, I.A.5
-
9
-
-
3142568420
-
Structures of bacillus subtilis PdaA, a family 4 carbohydrate esterase, and a complex with N-acetyl-glucosamine
-
Blair DE, van Aalten DM, (2004) Structures of bacillus subtilis PdaA, a family 4 carbohydrate esterase, and a complex with N-acetyl-glucosamine. FEBS Lett 570 (1-3): 13-19.
-
(2004)
FEBS Lett
, vol.570
, Issue.1-3
, pp. 13-19
-
-
Blair, D.E.1
van Aalten, D.M.2
-
10
-
-
0027440362
-
Protein-structure comparison by alignment of distance matrices
-
Holm L, Sander C, (1993) Protein-structure comparison by alignment of distance matrices. J Mol Biol 233 (1): 123-138.
-
(1993)
J Mol Biol
, vol.233
, Issue.1
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
11
-
-
53149095833
-
Logical identification of an allantoinase analog (PuuE) recruited from polysaccharide deacetylases
-
10.1074/jbc.M801195200
-
Ramazzina I, Cendron L, Folli C, Berni R, Monteverdi D, et al. (2008) Logical identification of an allantoinase analog (PuuE) recruited from polysaccharide deacetylases. J Biol Chem 283 (34): 23295-23304 10.1074/jbc.M801195200.
-
(2008)
J Biol Chem
, vol.283
, Issue.34
, pp. 23295-23304
-
-
Ramazzina, I.1
Cendron, L.2
Folli, C.3
Berni, R.4
Monteverdi, D.5
-
12
-
-
0037155881
-
The crystal structure of Helicobacter pylori cysteine-rich protein B reveals a novel fold for a penicillin-binding protein
-
Luthy L, Grutter MG, Mittl PR, (2002) The crystal structure of Helicobacter pylori cysteine-rich protein B reveals a novel fold for a penicillin-binding protein. J Biol Chem 277 (12): 10187-10193.
-
(2002)
J Biol Chem
, vol.277
, Issue.12
, pp. 10187-10193
-
-
Luthy, L.1
Grutter, M.G.2
Mittl, P.R.3
-
13
-
-
33646549276
-
Structure of the novel alpha-amylase AmyC from Thermotoga maritima
-
Dickmanns A, Ballschmiter M, Liebl W, Ficner R, (2006) Structure of the novel alpha-amylase AmyC from Thermotoga maritima. Acta Crystallogr D Biol Crystallogr 62 (Pt 3): 262-270.
-
(2006)
Acta Crystallogr D Biol Crystallogr
, vol.62
, Issue.Pt 3
, pp. 262-270
-
-
Dickmanns, A.1
Ballschmiter, M.2
Liebl, W.3
Ficner, R.4
-
14
-
-
0023219970
-
Putrescine and cadaverine are constituents of peptidoglycan in Veillonella alcalescens and Veillonella parvula
-
Kamio Y, Nakamura K, (1987) Putrescine and cadaverine are constituents of peptidoglycan in Veillonella alcalescens and Veillonella parvula. J Bacteriol 169 (6): 2881-2884.
-
(1987)
J Bacteriol
, vol.169
, Issue.6
, pp. 2881-2884
-
-
Kamio, Y.1
Nakamura, K.2
-
15
-
-
0034254598
-
Recognition of Chitooligosaccharides and Their N-Acetyl Groups by Putative Subsites of Chitin Deacetylase from a Deuteromycete, Colletotrichum lindemuthianum
-
Tokuyasu K, Mitsutomi M, Yamaguchi I, Hayashi K, Mori Y, (2000) Recognition of Chitooligosaccharides and Their N-Acetyl Groups by Putative Subsites of Chitin Deacetylase from a Deuteromycete, Colletotrichum lindemuthianum. Biochemistry 39: 8837-8843.
-
(2000)
Biochemistry
, vol.39
, pp. 8837-8843
-
-
Tokuyasu, K.1
Mitsutomi, M.2
Yamaguchi, I.3
Hayashi, K.4
Mori, Y.5
-
16
-
-
0042330067
-
Subsite structure of the endo-type chitin deacetylase from a Deuteromycete, Colletotrichum lindemuthianum: an investigation using steady-state kinetic analysis and MS
-
Hekmat O, Tokuyasu K, Withers SG, (2003) Subsite structure of the endo-type chitin deacetylase from a Deuteromycete, Colletotrichum lindemuthianum: an investigation using steady-state kinetic analysis and MS. Biochem J 374: 369-380.
-
(2003)
Biochem J
, vol.374
, pp. 369-380
-
-
Hekmat, O.1
Tokuyasu, K.2
Withers, S.G.3
-
17
-
-
34447545490
-
Direct analysis of the extracellular proteome from two strains of Helicobacter pylori
-
Smith TG, Lim JM, Weinberg MV, Wells L, Hoover TR, (2007) Direct analysis of the extracellular proteome from two strains of Helicobacter pylori. Proteomics 7 (13): 2240-2245.
-
(2007)
Proteomics
, vol.7
, Issue.13
, pp. 2240-2245
-
-
Smith, T.G.1
Lim, J.M.2
Weinberg, M.V.3
Wells, L.4
Hoover, T.R.5
-
18
-
-
53149153132
-
Characterization of structural variations in the peptidoglycan of vancomycin-susceptible Enterococcus faecium: Understanding glycopeptide-antibiotic binding sites using mass spectrometry
-
Patti GJ, Chen J, Schaefer J, Gross ML, (2008) Characterization of structural variations in the peptidoglycan of vancomycin-susceptible Enterococcus faecium: Understanding glycopeptide-antibiotic binding sites using mass spectrometry. J Am Soc Mass Spectrom 19 (10): 1467-1475.
-
(2008)
J Am Soc Mass Spectrom
, vol.19
, Issue.10
, pp. 1467-1475
-
-
Patti, G.J.1
Chen, J.2
Schaefer, J.3
Gross, M.L.4
-
19
-
-
33644874235
-
The integration of macromolecular diffraction data
-
Leslie AGW, (2006) The integration of macromolecular diffraction data. Acta Crystallogr D Biol Crystallogr 62: 48-57.
-
(2006)
Acta Crystallogr D Biol Crystallogr
, vol.62
, pp. 48-57
-
-
Leslie, A.G.W.1
-
20
-
-
33644875355
-
Scaling and assessment of data quality
-
Evans P, (2006) Scaling and assessment of data quality. Acta Crystallogr D Biol Crystallogr 62: 72-82.
-
(2006)
Acta Crystallogr D Biol Crystallogr
, vol.62
, pp. 72-82
-
-
Evans, P.1
-
21
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project, Number 4
-
Collaborative Computational Project, Number 4. (1994) The CCP4 suite: Programs for protein crystallography. Acta Crystallogr D Biol Crystallogr 50 (Pt 5): 760-763.
-
(1994)
Acta Crystallogr D Biol Crystallogr
, vol.50
, Issue.Pt 5
, pp. 760-763
-
-
-
22
-
-
34447508216
-
Phaser crystallographic software
-
10.1107/S0021889807021206
-
McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, et al. (2007) Phaser crystallographic software. J Appl Crystallogr 40 (Pt 4): 658-674 10.1107/S0021889807021206.
-
(2007)
J Appl Crystallogr
, vol.40
, Issue.Pt 4
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
-
23
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, et al. (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr Sect D-Biol Crystallogr 54: 905-921.
-
(1998)
Acta Crystallogr Sect D-Biol Crystallogr
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
-
25
-
-
76449098262
-
PHENIX: A comprehensive python-based system for macromolecular structure solution
-
Adams PD, Afonine PV, Bunkoczi G, Chen VB, Davis IW, et al. (2010) PHENIX: A comprehensive python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 66 (Pt 2): 213-221.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, Issue.Pt 2
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkoczi, G.3
Chen, V.B.4
Davis, I.W.5
-
27
-
-
0000243829
-
Procheck - a program to check the stereochemical quality of protein structures
-
Laskowski RA, Macarthur MW, Moss DS, Thornton JM, (1993) Procheck- a program to check the stereochemical quality of protein structures. J Appl Crystallogr 26: 283-291.
-
(1993)
J Appl Crystallogr
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
Macarthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
28
-
-
0032961270
-
ESPript: Analysis of multiple sequence alignments in PostScript
-
Gouet P, Courcelle E, Stuart DI, Metoz F, (1999) ESPript: Analysis of multiple sequence alignments in PostScript. Bioinformatics 15 (4): 305-308.
-
(1999)
Bioinformatics
, vol.15
, Issue.4
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
29
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ, (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22 (22): 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, Issue.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
30
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M, (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4 (4): 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, Issue.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
|