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Volumn 56, Issue 2, 2011, Pages 14-18

Detection of recombinations in tick-bome encephalitis virus by using computer analysis of viral genomes

Author keywords

Computer program methods; Recombination; Tick borne encephalitis virus

Indexed keywords

IXODIDA; TICK-BORNE ENCEPHALITIS VIRUS;

EID: 79955581958     PISSN: 05074088     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (2)

References (23)
  • 1
    • 79955600478 scopus 로고    scopus 로고
    • Russian source
  • 2
    • 79955610227 scopus 로고    scopus 로고
    • Russian source
  • 3
    • 79955638603 scopus 로고    scopus 로고
    • Russian source
  • 4
    • 79955624933 scopus 로고    scopus 로고
    • Russian source
  • 5
    • 79955609837 scopus 로고    scopus 로고
    • Russian source
  • 6
    • 79955629821 scopus 로고    scopus 로고
    • Russian source
  • 7
    • 79955635049 scopus 로고    scopus 로고
    • Russian source
  • 8
    • 0033753825 scopus 로고    scopus 로고
    • Sister-Scanning: A Monte Carlo procedure for assessing signals in recombinant sequences
    • Gibbs M. J., Armstrong J. S., Gibbs A. J. Sister-Scanning: a Monte Carlo procedure for assessing signals in recombinant sequences Bioinformatics.2000. Vol. 16. 573-582.
    • (2000) Bioinformatics , vol.16 , pp. 573-582
    • Gibbs, M.J.1    Armstrong, J.S.2    Gibbs, A.J.3
  • 9
    • 33751253784 scopus 로고    scopus 로고
    • Recombination patterns in aphthoviruses mirror those found in other picornaviruses
    • Heath L., van der Walt E., Varsani A., Martin' D. P. Recombination patterns in aphthoviruses mirror those found in other picornaviruses J. Virol. 2006.Vol. 80. 1182711832.
    • (2006) J. Virol. , vol.80 , pp. 1182711832
    • Heath, L.1    Van Der Walt, E.2    Varsani, A.3    Martin'D, P.4
  • 10
    • 0033021298 scopus 로고    scopus 로고
    • Phylogenetic evidence for recombination in dengue virus
    • Holmes E. C., Worobey M., Rambaut A. Phylogenetic evidence for recombination in dengue virus Mol. Biol. Evol.1999. VoL 16.P. 405-409.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 405-409
    • Holmes, E.C.1    Worobey, M.2    Rambaut, A.3
  • 11
    • 0033824415 scopus 로고    scopus 로고
    • RDP: Detection of recombination amongst aligned sequences
    • Martin D., Rybicki E. RDP: detection of recombination amongst aligned sequences Bioinformatics.2000.Vol. 16. P. 562-563.
    • (2000) Bioinformatics , vol.16 , pp. 562-563
    • Martin, D.1    Rybicki, E.2
  • 12
    • 13144283628 scopus 로고    scopus 로고
    • A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints
    • Martin D. P., Posada D., Crandall K. A., Williamson C. A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints AIDS Res. Hum. Retrovirus.2005. 21, N 1. 98-102.
    • (2005) AIDS Res. Hum. Retrovirus. , vol.21 , Issue.1 , pp. 98-102
    • Martin, D.P.1    Posada, D.2    Crandall, K.A.3    Williamson, C.4
  • 13
    • 0026708873 scopus 로고
    • Analyzing the mosaic structure of genes
    • Maynard S. J. Analyzing the mosaic structure of genes J. Mol. Evol. 1992. 34. 126-129.
    • (1992) J. Mol. Evol. , vol.34 , pp. 126-129
    • Maynard, S.J.1
  • 14
    • 0031947723 scopus 로고    scopus 로고
    • Tracing the origins of louping ill virus by molecular phylogenetic analysis
    • McGuire K. et al. Tracing the origins of louping ill virus by molecular phylogenetic analysis J. Gen. Virol.1998. Vol. 79. 981-988.
    • (1998) J. Gen. Virol. , vol.79 , pp. 981-988
    • McGuire, K.1
  • 15
    • 0034097468 scopus 로고    scopus 로고
    • TOPAL 2.0: Improved detection of mosaic sequences within multiple alignments
    • McGuire G., Wright F. TOPAL 2.0: Improved detection of mosaic sequences within multiple alignments Bioinformatics. 2000. 16. 130-134.
    • (2000) Bioinformatics , vol.16 , pp. 130-134
    • McGuire, G.1    Wright, F.2
  • 16
    • 4444299144 scopus 로고    scopus 로고
    • TOPALi: Software for automatic identification of recombinant sequences within DNA multiple alignments
    • Milne I., Wright F, Rowe G. et al. TOPALi: Software for automatic identification of recombinant sequences within DNA multiple alignments Bioinformatics.2004.Vol. 20.P. 1806-1807.
    • (2004) Bioinformatics , vol.20 , pp. 1806-1807
    • Milne, I.1    Wright, F.2    Rowe, G.3
  • 17
    • 0033590220 scopus 로고    scopus 로고
    • Possible emergence of new geminivimses by frequent recombination
    • Padidam M., Sawyer S., Fauquet C M. Possible emergence of new geminivimses by frequent recombination Virology. 1999. 265. 218-225.
    • (1999) Virology , vol.265 , pp. 218-225
    • Padidam, M.1    Sawyer, S.2    Fauquet, C.M.3
  • 18
    • 0025056960 scopus 로고
    • Nucleotide sequence of the genome and complete amino acid sequence of the polyprotein of tick-borne encephalitis virus
    • Pletnev A. G., Yamshchikov V. F., Blinov V. M. Nucleotide sequence of the genome and complete amino acid sequence of the polyprotein of tick-borne encephalitis virus Virology.1990. 174. 250-263.
    • (1990) Virology , vol.174 , pp. 250-263
    • Pletnev, A.G.1    Yamshchikov, V.F.2    Blinov, V.M.3
  • 19
    • 0027255002 scopus 로고
    • Chimeric tick-borne encephalitis and dengue type 4 viruses: Effects of mutations on neurovirulence in mice
    • Pletnev A. G., Bray M., Lai C. J. Chimeric tick-borne encephalitis and dengue type 4 viruses: effects of mutations on neurovirulence in mice J. Virol 1993. 67. 4956-4963.
    • (1993) J. Virol , vol.67 , pp. 4956-4963
    • Pletnev, A.G.1    Bray, M.2    Lai, C.J.3
  • 20
    • 0035923699 scopus 로고    scopus 로고
    • Evaluation of methods for detecting recombination from DNA sequences: Computer simulations
    • Posada D., Crandall K. A. Evaluation of methods for detecting recombination from DNA sequences: Computer simulations Proc. Natl. Acad. Sci. USA. 2001. 98. 13757-13762.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 13757-13762
    • Posada, D.1    Crandall, K.A.2
  • 21
    • 29744442930 scopus 로고    scopus 로고
    • Recombination in the genesis and evolution of hepatitis B virus genotypes
    • Simmonds P., Midgley S. Recombination in the genesis and evolution of hepatitis B virus genotypes J. Virol.2005. Vol. 79. 1546-1576.
    • (2005) J. Virol. , vol.79 , pp. 1546-1576
    • Simmonds, P.1    Midgley, S.2
  • 22
    • 72849121447 scopus 로고    scopus 로고
    • A trans-complementing recombination trap demonstrates a low propensity of fiavivimses for intermolecular recombination
    • Taucher C., Berger A., Mandl C. W. A trans-complementing recombination trap demonstrates a low propensity of fiavivimses for intermolecular recombination J. Virol.2010. Vol. 84. 599-611.
    • (2010) J. Virol. , vol.84 , pp. 599-611
    • Taucher, C.1    Berger, A.2    Mandl, C.W.3
  • 23
    • 0032853634 scopus 로고    scopus 로고
    • Evolutionary aspects of recombination in RNA viruses
    • Worobey M., Holmes E. C. Evolutionary aspects of recombination in RNA viruses J. Gen. Virol. 1999. 80. P. 2535-2543.
    • (1999) J. Gen. Virol. , vol.80 , pp. 2535-2543
    • Worobey, M.1    Holmes, E.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.