-
1
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
Felsenstein, J. (1978) Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool., 27, 401-410.
-
(1978)
Syst. Zool.
, vol.27
, pp. 401-410
-
-
Felsenstein, J.1
-
2
-
-
0031041347
-
A likelihood method for the detection of selection and recombination using nucleotide sequences
-
Grassly, N.C. and Holmes, E.C. (1997) A likelihood method for the detection of selection and recombination using nucleotide sequences. Mol. Biol. Evol., 14, 239-247.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 239-247
-
-
Grassly, N.C.1
Holmes, E.C.2
-
3
-
-
0030670413
-
Pseq-gen: An application for the Monte Carlo simulation of protein sequence evolution along phylogenetic trees
-
Grassly, N.C., Adachi, J. and Rambaut, A. (1997) Pseq-gen: an application for the Monte Carlo simulation of protein sequence evolution along phylogenetic trees. CABIOS, 13, 559-560.
-
(1997)
CABIOS
, vol.13
, pp. 559-560
-
-
Grassly, N.C.1
Adachi, J.2
Rambaut, A.3
-
4
-
-
0030498194
-
Ancestral inference from samples of DNA sequences with recombination
-
Griffiths, R.C. and Marjoram, P. (1996) Ancestral inference from samples of DNA sequences with recombination. J. Comput. Biol., 3, 479-502.
-
(1996)
J. Comput. Biol.
, vol.3
, pp. 479-502
-
-
Griffiths, R.C.1
Marjoram, P.2
-
5
-
-
0027471670
-
A heuristic method to reconstruct the history of sequences subject to recombination
-
Hein, J. (1993) A heuristic method to reconstruct the history of sequences subject to recombination. J. Mol. Evol., 36, 396-405.
-
(1993)
J. Mol. Evol.
, vol.36
, pp. 396-405
-
-
Hein, J.1
-
6
-
-
0002410257
-
Parametric bootstrapping in molecular phylogenetics: Applications and performance
-
Ferraris, J.D. and Palumbi, S.R. (eds), Wiley-Liss, New York
-
Huelsenbeck, J.P., Hillis, D.M. and Jones, R. (1996) Parametric bootstrapping in molecular phylogenetics: applications and performance. In Ferraris, J.D. and Palumbi, S.R. (eds), Molecular Zoology: Advances, Strategies and Protocols Wiley-Liss, New York, pp. 19-45.
-
(1996)
Molecular Zoology: Advances, Strategies and Protocols
, pp. 19-45
-
-
Huelsenbeck, J.P.1
Hillis, D.M.2
Jones, R.3
-
7
-
-
0000732090
-
Evolution of protein molecules
-
Munro, H.N. (ed.), Academic Press, New York
-
Jukes, T.H. and Cantor, C.R. (1969) Evolution of protein molecules. In Munro, H.N. (ed.), Mammalian Protein Metabolism Academic Press, New York, pp. 21-132.
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
8
-
-
0019296687
-
A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980) A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol., 16, 111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
10
-
-
85038040233
-
-
LAMARC
-
Kuhner, M.K. and Yamato, J. (1998) LAMARC. Available at http: //evolution.genetics.washington.edu/lamarc.html.
-
(1998)
-
-
Kuhner, M.K.1
Yamato, J.2
-
11
-
-
0026771340
-
Inference of horizontal genetic transfer from molecular data: An approach using the bootstrap
-
Lawrence, J.G. and Hartl, D.L. (1992) Inference of horizontal genetic transfer from molecular data: an approach using the bootstrap. Genetics, 131, 753-760.
-
(1992)
Genetics
, vol.131
, pp. 753-760
-
-
Lawrence, J.G.1
Hartl, D.L.2
-
12
-
-
0026708873
-
Analyzing the mosaic structure of genes
-
Maynard Smith, J. (1992) Analyzing the mosaic structure of genes. J. Mol. Evol., 34, 126-129.
-
(1992)
J. Mol. Evol.
, vol.34
, pp. 126-129
-
-
Maynard Smith, J.1
-
13
-
-
0031897789
-
Detecting recombination from gene trees
-
Maynard Smith, J. and Smith, N.H. (1998) Detecting recombination from gene trees. Mol. Biol. Evol., 15, 590-599.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 590-599
-
-
Maynard Smith, J.1
Smith, N.H.2
-
14
-
-
0031857686
-
TOPAL: Recombination detection in DNA and protein sequences
-
McGuire, G. and Wright, F. (1998) TOPAL: recombination detection in DNA and protein sequences. Bioinformatics, 14, 219-220.
-
(1998)
Bioinformatics
, vol.14
, pp. 219-220
-
-
McGuire, G.1
Wright, F.2
-
15
-
-
0030732297
-
A graphical method for detecting recombination in phylogenetic data sets
-
McGuire, G., Wright, F. and Prentice, M.J. (1997) A graphical method for detecting recombination in phylogenetic data sets. Mol. Biol. Evol., 14, 1125-1131.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 1125-1131
-
-
McGuire, G.1
Wright, F.2
Prentice, M.J.3
-
16
-
-
0032712498
-
Improved error bounds for genetic distances from DNA sequences
-
in press
-
McGuire, G., Prentice, M.J. and Wright, F. (1999) Improved error bounds for genetic distances from DNA sequences. Biometrics, in press.
-
(1999)
Biometrics
-
-
McGuire, G.1
Prentice, M.J.2
Wright, F.3
-
17
-
-
0034048880
-
A Bayesian model for detecting past recombination events in DNA multiple alignments
-
in press
-
McGuire, G., Wright, F. and Prentice, M.J. (2000) A Bayesian model for detecting past recombination events in DNA multiple alignments. J. Comput. Biol., in press.
-
(2000)
J. Comput. Biol.
-
-
McGuire, G.1
Wright, F.2
Prentice, M.J.3
-
18
-
-
0030928378
-
Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
-
Rambaut, A. and Grassly, N.C. (1997) Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees. CABIOS, 13, 235-238.
-
(1997)
CABIOS
, vol.13
, pp. 235-238
-
-
Rambaut, A.1
Grassly, N.C.2
-
19
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylognetic trees
-
Saitou, N. and Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylognetic trees. Mol. Biol. Evol., 4, 406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
20
-
-
0028793170
-
Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning
-
Salminen, M.O., Carr, J.K., Burke, D.S. and McCutchan, F.E. (1995) Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning. AIDS Res. Hum. Retroviruses, 11, 1423-1425.
-
(1995)
AIDS Res. Hum. Retroviruses
, vol.11
, pp. 1423-1425
-
-
Salminen, M.O.1
Carr, J.K.2
Burke, D.S.3
McCutchan, F.E.4
-
21
-
-
0024356449
-
Statistical tests for detecting gene conversion
-
Sawyer, S. (1989) Statistical tests for detecting gene conversion. Mol. Biol. Evol., 6, 526-538.
-
(1989)
Mol. Biol. Evol.
, vol.6
, pp. 526-538
-
-
Sawyer, S.1
-
22
-
-
0022410317
-
Statistical methods of DNA sequence analysis: Detection of intragenic recombination or gene conversion
-
Stephens, J.C. (1985) Statistical methods of DNA sequence analysis: detection of intragenic recombination or gene conversion. Mol. Biol. Evol., 2, 539-556.
-
(1985)
Mol. Biol. Evol.
, vol.2
, pp. 539-556
-
-
Stephens, J.C.1
-
23
-
-
0026644652
-
Sequence diversity within the argF, fbp and recA genes of natural isolates of Neisseria meningitidis: Interspecies recombination within the argf gene
-
Zhou, J. and Spratt, B.G. (1992) Sequence diversity within the argF, fbp and recA genes of natural isolates of Neisseria meningitidis: interspecies recombination within the argf gene. Mol. Microbiol., 6, 2135-2146.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 2135-2146
-
-
Zhou, J.1
Spratt, B.G.2
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