메뉴 건너뛰기




Volumn 56, Issue 3, 2011, Pages 907-922

A Bayesian model of shape and appearance for subcortical brain segmentation

Author keywords

Bayesian; Classification; Segmentation; Shape model; Subcortical structures

Indexed keywords

ADOLESCENT; ADULT; AGED; ALZHEIMER DISEASE; ANALYSIS OF COVARIANCE; ARTICLE; AUTOANALYSIS; BAYES THEOREM; BRAIN CORTEX; CONCEPTUAL FRAMEWORK; CONTROLLED STUDY; DATA ANALYSIS SOFTWARE; DISPLAY SYSTEM; HUMAN; IMAGE ANALYSIS; IMAGE PROCESSING; IMAGE QUALITY; IMAGE SEGMENTATION; IMAGING AND DISPLAY; INTERMETHOD COMPARISON; MAJOR CLINICAL STUDY; MATHEMATICAL COMPUTING; MATHEMATICAL MODEL; NEUROANATOMY; NEUROIMAGING; NUCLEAR MAGNETIC RESONANCE IMAGING; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; STRUCTURE ANALYSIS; TISSUE DISTRIBUTION; VOXEL BASED MORPHOMETRY;

EID: 79955484518     PISSN: 10538119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2011.02.046     Document Type: Article
Times cited : (1896)

References (87)
  • 5
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y., Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. R. Stat. Soc. B 1995, 57:289-300.
    • (1995) R. Stat. Soc. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 7
    • 84883845660 scopus 로고    scopus 로고
    • Tensor-based morphometry with mappings parameterized by stationary velocity fields in Alzheimer's Disease Neuroimaging Initiative
    • Bossa M., Zacur E., Olmos S. Tensor-based morphometry with mappings parameterized by stationary velocity fields in Alzheimer's Disease Neuroimaging Initiative. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2009 2009, 240-247.
    • (2009) Medical Image Computing and Computer-Assisted Intervention - MICCAI 2009 , pp. 240-247
    • Bossa, M.1    Zacur, E.2    Olmos, S.3
  • 8
    • 77952548226 scopus 로고    scopus 로고
    • Tensor-based morphometry with stationary velocity field diffeomorphic registration: application to ADNI
    • Bossa M., Zacur E., Olmos S. Tensor-based morphometry with stationary velocity field diffeomorphic registration: application to ADNI. Neuroimage 2010, 51:956-969.
    • (2010) Neuroimage , vol.51 , pp. 956-969
    • Bossa, M.1    Zacur, E.2    Olmos, S.3
  • 11
    • 60149103001 scopus 로고    scopus 로고
    • Risk for depression and neural responses to fearful facial expressions of emotion
    • Chan S., Norbury R., Goodwin G., Harmer C. Risk for depression and neural responses to fearful facial expressions of emotion. Br. J. Psychiatry 2009, 194:139-145.
    • (2009) Br. J. Psychiatry , vol.194 , pp. 139-145
    • Chan, S.1    Norbury, R.2    Goodwin, G.3    Harmer, C.4
  • 13
    • 33947125151 scopus 로고    scopus 로고
    • Anatomically constrained region deformation for the automated segmentation of the hippocampus and the amygdala: method and validation on controls and patients with Alzheimer's disease
    • Chupin M., Mukuna-Bantumbakulu A., Hasboun D., Bardinet E., Baillet S., Kinkingnéhun S., Lemieux L., Dubois B., Garnero L. Anatomically constrained region deformation for the automated segmentation of the hippocampus and the amygdala: method and validation on controls and patients with Alzheimer's disease. Neuroimage 2007, 34:996-1019.
    • (2007) Neuroimage , vol.34 , pp. 996-1019
    • Chupin, M.1    Mukuna-Bantumbakulu, A.2    Hasboun, D.3    Bardinet, E.4    Baillet, S.5    Kinkingnéhun, S.6    Lemieux, L.7    Dubois, B.8    Garnero, L.9
  • 15
    • 0000347410 scopus 로고    scopus 로고
    • Animal: validation and applications of nonlinear registration-based segmentation
    • Collins D.L., Evans A.C. Animal: validation and applications of nonlinear registration-based segmentation. Intern. J. Pattern Recognit. Artif. Intell. 1997, 11:1271-1294.
    • (1997) Intern. J. Pattern Recognit. Artif. Intell. , vol.11 , pp. 1271-1294
    • Collins, D.L.1    Evans, A.C.2
  • 16
    • 77954957984 scopus 로고    scopus 로고
    • Towards accurate, automatic segmentation of the hippocampus and amygdala from MRI by augmenting ANIMAL with a template library and label fusion
    • Collins D., Pruessner J. Towards accurate, automatic segmentation of the hippocampus and amygdala from MRI by augmenting ANIMAL with a template library and label fusion. Neuroimage 2010, 52:1355-1366.
    • (2010) Neuroimage , vol.52 , pp. 1355-1366
    • Collins, D.1    Pruessner, J.2
  • 17
    • 33747634001 scopus 로고    scopus 로고
    • Integration of fuzzy spatial relations in deformable models - application to brain MRI segmentation
    • Colliot O., Camara O., Bloch I. Integration of fuzzy spatial relations in deformable models - application to brain MRI segmentation. Pattern Recognit. 2006, 39:1401-1414.
    • (2006) Pattern Recognit. , vol.39 , pp. 1401-1414
    • Colliot, O.1    Camara, O.2    Bloch, I.3
  • 18
    • 0034849012 scopus 로고    scopus 로고
    • Statistical models of appearance for medical image analysis and computer vision
    • Cootes T., Taylor C. Statistical models of appearance for medical image analysis and computer vision. Proc. SPIE Medical Imaging, Citeseer 2001, 236-248.
    • (2001) Proc. SPIE Medical Imaging, Citeseer , pp. 236-248
    • Cootes, T.1    Taylor, C.2
  • 21
    • 0036892825 scopus 로고    scopus 로고
    • Diffusion snakes: introducing statistical shape knowledge into the mumford-shah functional
    • Cremers D., Tischhäuser F., Weickert J., Schnörr C. Diffusion snakes: introducing statistical shape knowledge into the mumford-shah functional. Int. J. Comput. Vision 2002, 50:295-313.
    • (2002) Int. J. Comput. Vision , vol.50 , pp. 295-313
    • Cremers, D.1    Tischhäuser, F.2    Weickert, J.3    Schnörr, C.4
  • 22
    • 33744920320 scopus 로고    scopus 로고
    • Kernel density estimation and intrinsic alignment for shape priors in level set segmentation
    • Cremers D., Osher S., Soatto S. Kernel density estimation and intrinsic alignment for shape priors in level set segmentation. Int. J. Comput. Vision 2006, 69:335-351.
    • (2006) Int. J. Comput. Vision , vol.69 , pp. 335-351
    • Cremers, D.1    Osher, S.2    Soatto, S.3
  • 23
    • 0038321577 scopus 로고    scopus 로고
    • Hierarchical active shape models, using the wavelet transform
    • Davatzikos C., Tao X., Shen D. Hierarchical active shape models, using the wavelet transform. IEEE Trans. Med. Imaging 2003, 22:414-423.
    • (2003) IEEE Trans. Med. Imaging , vol.22 , pp. 414-423
    • Davatzikos, C.1    Tao, X.2    Shen, D.3
  • 29
    • 77955072596 scopus 로고    scopus 로고
    • Reductions of thalamic volume and regional shape changes in the vegetative and the minimally conscious states
    • Fernandez-Espejo D., Junque C., Bernabeu M., Roig-Rovira T., Vendrell P., Mercader J. Reductions of thalamic volume and regional shape changes in the vegetative and the minimally conscious states. J. Neurotrauma 2010, 27:1187-1193.
    • (2010) J. Neurotrauma , vol.27 , pp. 1187-1193
    • Fernandez-Espejo, D.1    Junque, C.2    Bernabeu, M.3    Roig-Rovira, T.4    Vendrell, P.5    Mercader, J.6
  • 33
    • 77956174929 scopus 로고    scopus 로고
    • Genetic variation in CACNA1C, a gene associated with bipolar disorder, influences brainstem rather than gray matter volume in healthy individuals
    • Franke B., Vasquez A., Veltman J., Brunner H., Rijpkema M., Fernández G. Genetic variation in CACNA1C, a gene associated with bipolar disorder, influences brainstem rather than gray matter volume in healthy individuals. Biol. Psychiatry 2010, 68:586-588.
    • (2010) Biol. Psychiatry , vol.68 , pp. 586-588
    • Franke, B.1    Vasquez, A.2    Veltman, J.3    Brunner, H.4    Rijpkema, M.5    Fernández, G.6
  • 35
    • 0036334830 scopus 로고    scopus 로고
    • Thresholding of statistical maps in functional neuroimaging using the false discovery rate
    • Genovese C.R., Lazar N.A., Nichols T.E. Thresholding of statistical maps in functional neuroimaging using the false discovery rate. Neuroimage 2002, 15:870-878.
    • (2002) Neuroimage , vol.15 , pp. 870-878
    • Genovese, C.R.1    Lazar, N.A.2    Nichols, T.E.3
  • 36
    • 67651233524 scopus 로고    scopus 로고
    • Multidimensional classification of hippocampal shape features discriminates Alzheimer's disease and mild cognitive impairment from normal aging
    • Gerardin E., Chételat G., Chupin M., Cuingnet R., Desgranges B., Kim H., Niethammer M., Dubois B., Lehéricy S. Multidimensional classification of hippocampal shape features discriminates Alzheimer's disease and mild cognitive impairment from normal aging. Neuroimage 2009, 47:1476-1486.
    • (2009) Neuroimage , vol.47 , pp. 1476-1486
    • Gerardin, E.1    Chételat, G.2    Chupin, M.3    Cuingnet, R.4    Desgranges, B.5    Kim, H.6    Niethammer, M.7    Dubois, B.8    Lehéricy, S.9
  • 37
    • 60549085056 scopus 로고    scopus 로고
    • Cross-validation of deformable registration with field maps in functional magnetic resonance brain imaging
    • Gholipour A., Kehtarnavaz N., Gopinath K., Briggs R. Cross-validation of deformable registration with field maps in functional magnetic resonance brain imaging. IEEE J. Sel. Top. Sign. Proces. 2009, 2:854-869.
    • (2009) IEEE J. Sel. Top. Sign. Proces. , vol.2 , pp. 854-869
    • Gholipour, A.1    Kehtarnavaz, N.2    Gopinath, K.3    Briggs, R.4
  • 41
    • 33748784605 scopus 로고    scopus 로고
    • Automatic anatomical brain MRI segmentation combining label propagation and decision fusion
    • Heckemann R., Hajnal J., Aljabar P., Rueckert D., Hammers A. Automatic anatomical brain MRI segmentation combining label propagation and decision fusion. Neuroimage 2006, 33:115-126.
    • (2006) Neuroimage , vol.33 , pp. 115-126
    • Heckemann, R.1    Hajnal, J.2    Aljabar, P.3    Rueckert, D.4    Hammers, A.5
  • 42
    • 70349090032 scopus 로고    scopus 로고
    • Statistical shape models for 3D medical image segmentation: a review
    • Heimann T., Meinzer H. Statistical shape models for 3D medical image segmentation: a review. Med. Image Anal. 2009, 13:543-563.
    • (2009) Med. Image Anal. , vol.13 , pp. 543-563
    • Heimann, T.1    Meinzer, H.2
  • 43
  • 44
    • 77953285568 scopus 로고    scopus 로고
    • Effects of exogenous testosterone on the ventral striatal BOLD response during reward anticipation in healthy women
    • Hermans E., Bos P., Ossewaarde L., Ramsey N., Fernández G., van Honk J. Effects of exogenous testosterone on the ventral striatal BOLD response during reward anticipation in healthy women. Neuroimage 2010, 52:277-283.
    • (2010) Neuroimage , vol.52 , pp. 277-283
    • Hermans, E.1    Bos, P.2    Ossewaarde, L.3    Ramsey, N.4    Fernández, G.5    van Honk, J.6
  • 46
    • 0036425968 scopus 로고    scopus 로고
    • Improved optimisation for the robust and accurate linear registration and motion correction of brain images
    • Jenkinson M., Bannister P., Brady J., Smith S. Improved optimisation for the robust and accurate linear registration and motion correction of brain images. Neuroimage 2002, 17:825-841.
    • (2002) Neuroimage , vol.17 , pp. 825-841
    • Jenkinson, M.1    Bannister, P.2    Brady, J.3    Smith, S.4
  • 48
    • 44549086707 scopus 로고    scopus 로고
    • FreeSurfer-initiated fully-automated subcortical brain segmentation in MRI using large deformation diffeomorphic metric mapping
    • Khan A., Wang L., Beg M. FreeSurfer-initiated fully-automated subcortical brain segmentation in MRI using large deformation diffeomorphic metric mapping. Neuroimage 2008, 41:735-746.
    • (2008) Neuroimage , vol.41 , pp. 735-746
    • Khan, A.1    Wang, L.2    Beg, M.3
  • 51
    • 79955465190 scopus 로고    scopus 로고
    • Improved segmentation of hippocampus using landmark based large deformation diffeomorphic mapping
    • Lee N., Mori S., Miller M. Improved segmentation of hippocampus using landmark based large deformation diffeomorphic mapping. Neuroimage 2009, 47:S164.
    • (2009) Neuroimage , vol.47
    • Lee, N.1    Mori, S.2    Miller, M.3
  • 52
    • 75749142730 scopus 로고    scopus 로고
    • Enhanced detection of diffusion reductions in Creutzfeldt-Jakob disease at a higher B factor
    • Lee H., Hoffman C., Kingsley P., Degnan A., Cohen O., Prohovnik I. Enhanced detection of diffusion reductions in Creutzfeldt-Jakob disease at a higher B factor. Am. J. Neuroradiol. 2010, 31:49-54.
    • (2010) Am. J. Neuroradiol. , vol.31 , pp. 49-54
    • Lee, H.1    Hoffman, C.2    Kingsley, P.3    Degnan, A.4    Cohen, O.5    Prohovnik, I.6
  • 53
    • 66249143023 scopus 로고    scopus 로고
    • Fully automatic hippocampus segmentation and classification in Alzheimer's disease and mild cognitive impairment applied on data from ADNI
    • Lehéricy S., Benali H., Garnero L., Colliot O. Fully automatic hippocampus segmentation and classification in Alzheimer's disease and mild cognitive impairment applied on data from ADNI. Hippocampus 2009, 19:579-587.
    • (2009) Hippocampus , vol.19 , pp. 579-587
    • Lehéricy, S.1    Benali, H.2    Garnero, L.3    Colliot, O.4
  • 55
    • 34548183245 scopus 로고    scopus 로고
    • Hippocampal shape analysis of Alzheimer disease based on machine learning methods
    • Li S., Shi F., Pu F., Li X., Jiang T., Xie S., Wang Y. Hippocampal shape analysis of Alzheimer disease based on machine learning methods. Am. J. Neuroradiol. 2007, 28:1339-1345.
    • (2007) Am. J. Neuroradiol. , vol.28 , pp. 1339-1345
    • Li, S.1    Shi, F.2    Pu, F.3    Li, X.4    Jiang, T.5    Xie, S.6    Wang, Y.7
  • 57
    • 72449168369 scopus 로고    scopus 로고
    • Behavioral and neural evidence of incentive bias for immediate rewards relative to preference-matched delayed rewards
    • Luo S., Ainslie G., Giragosian L., Monterosso J. Behavioral and neural evidence of incentive bias for immediate rewards relative to preference-matched delayed rewards. J. Neurosci. 2009, 29:14820-14827.
    • (2009) J. Neurosci. , vol.29 , pp. 14820-14827
    • Luo, S.1    Ainslie, G.2    Giragosian, L.3    Monterosso, J.4
  • 58
    • 67349215018 scopus 로고    scopus 로고
    • MRI characteristics of the substantia nigra in Parkinson's disease: a combined quantitative T1 and DTI study
    • Menke R., Scholz J., Miller K., Deoni S., Jbabdi S., Matthews P., Zarei M. MRI characteristics of the substantia nigra in Parkinson's disease: a combined quantitative T1 and DTI study. Neuroimage 2009, 47:435-441.
    • (2009) Neuroimage , vol.47 , pp. 435-441
    • Menke, R.1    Scholz, J.2    Miller, K.3    Deoni, S.4    Jbabdi, S.5    Matthews, P.6    Zarei, M.7
  • 60
    • 0035545737 scopus 로고    scopus 로고
    • A review of deformable surfaces: topology, geometry and deformation
    • Montagnat J., Delingette H., Ayache N. A review of deformable surfaces: topology, geometry and deformation. Image Vis. Comput. 2001, 19:1023-1040.
    • (2001) Image Vis. Comput. , vol.19 , pp. 1023-1040
    • Montagnat, J.1    Delingette, H.2    Ayache, N.3
  • 61
  • 62
    • 78649531345 scopus 로고    scopus 로고
    • Scan-rescan reliability of subcortical brain volumes derived from automated segmentation
    • Morey R., Selgrade E., Wagner H., Huettel S., Wang L., McCarthy G. Scan-rescan reliability of subcortical brain volumes derived from automated segmentation. Hum. Brain Mapp. 2010, 31:1751-1762.
    • (2010) Hum. Brain Mapp. , vol.31 , pp. 1751-1762
    • Morey, R.1    Selgrade, E.2    Wagner, H.3    Huettel, S.4    Wang, L.5    McCarthy, G.6
  • 63
    • 74949102081 scopus 로고    scopus 로고
    • Hippocampal volume assessment in temporal lobe epilepsy: how good is automated segmentation?
    • Pardoe H., Pell G., Abbott D., Jackson G. Hippocampal volume assessment in temporal lobe epilepsy: how good is automated segmentation?. Epilepsia 2009, 50:2586-2592.
    • (2009) Epilepsia , vol.50 , pp. 2586-2592
    • Pardoe, H.1    Pell, G.2    Abbott, D.3    Jackson, G.4
  • 66
    • 33747434409 scopus 로고    scopus 로고
    • A Bayesian model for joint segmentation and registration
    • Pohl K.M., Fisher J., Kikinis R., Wells W.M. A Bayesian model for joint segmentation and registration. Neuroimage 2006, 31:228-229.
    • (2006) Neuroimage , vol.31 , pp. 228-229
    • Pohl, K.M.1    Fisher, J.2    Kikinis, R.3    Wells, W.M.4
  • 69
    • 61449196584 scopus 로고    scopus 로고
    • Regional shape abnormalities in mild cognitive impairment and Alzheimer's disease
    • Qiu A., Fennema-Notestine C., Dale A., Miller M. Regional shape abnormalities in mild cognitive impairment and Alzheimer's disease. Neuroimage 2009, 45:656-661.
    • (2009) Neuroimage , vol.45 , pp. 656-661
    • Qiu, A.1    Fennema-Notestine, C.2    Dale, A.3    Miller, M.4
  • 72
    • 71049138852 scopus 로고    scopus 로고
    • Putaminal volume and diffusion in early familial Creutzfeldt-Jakob Disease
    • Seror I., Lee H., Cohen O., Hoffmann C., Prohovnik I. Putaminal volume and diffusion in early familial Creutzfeldt-Jakob Disease. J. Neurol. Sci. 2010, 288:129-134.
    • (2010) J. Neurol. Sci. , vol.288 , pp. 129-134
    • Seror, I.1    Lee, H.2    Cohen, O.3    Hoffmann, C.4    Prohovnik, I.5
  • 73
    • 79952142427 scopus 로고    scopus 로고
    • Active Volume Models for Medical Image Segmentation
    • Shen T., Li H., Huang X. Active Volume Models for Medical Image Segmentation. IEEE Trans. Med. Imaging 2011, 30:774-791.
    • (2011) IEEE Trans. Med. Imaging , vol.30 , pp. 774-791
    • Shen, T.1    Li, H.2    Huang, X.3
  • 74
    • 0036828879 scopus 로고    scopus 로고
    • Fast robust automated brain extraction
    • Smith S. Fast robust automated brain extraction. Hum. Brain Mapp. 2002, 17:143-155.
    • (2002) Hum. Brain Mapp. , vol.17 , pp. 143-155
    • Smith, S.1
  • 75
    • 71849102319 scopus 로고    scopus 로고
    • Brain tractography using Q-ball imaging and graph theory: improved connectivities through fibre crossings via a model-based approach
    • Sotiropoulos S., Bai L., Morgan P., Constantinescu C., Tench C. Brain tractography using Q-ball imaging and graph theory: improved connectivities through fibre crossings via a model-based approach. Neuroimage 2010, 49:2444-2456.
    • (2010) Neuroimage , vol.49 , pp. 2444-2456
    • Sotiropoulos, S.1    Bai, L.2    Morgan, P.3    Constantinescu, C.4    Tench, C.5
  • 76
    • 78651277186 scopus 로고    scopus 로고
    • Hippocampi, thalami, and accumbens microstructural damage in schizophrenia: a volumetry, diffusivity, and neuropsychological study
    • Spoletini I., Cherubini A., Banfi G., Rubino I.A., Peran P., Caltagirone C., Spalletta G. Hippocampi, thalami, and accumbens microstructural damage in schizophrenia: a volumetry, diffusivity, and neuropsychological study. Schizophr. Bull. 2009, 10.1093/schbul/sbp, 058, 1-13.
    • (2009) Schizophr. Bull.
    • Spoletini, I.1    Cherubini, A.2    Banfi, G.3    Rubino, I.A.4    Peran, P.5    Caltagirone, C.6    Spalletta, G.7
  • 77
    • 0041324902 scopus 로고    scopus 로고
    • Statistical shape analysis of neuroanatomical structures based on medial models
    • Styner M., Gerig G., Lieberman J., Jones D., Weinberger D. Statistical shape analysis of neuroanatomical structures based on medial models. Med. Image Anal. 2003, 7:207-220.
    • (2003) Med. Image Anal. , vol.7 , pp. 207-220
    • Styner, M.1    Gerig, G.2    Lieberman, J.3    Jones, D.4    Weinberger, D.5
  • 78
    • 10244264665 scopus 로고    scopus 로고
    • Mutual information in coupled multi-shape model for medical image segmentation
    • Tsai A., Wells W., Tempany C., Grimson E., Willsky A. Mutual information in coupled multi-shape model for medical image segmentation. Med. Image Anal. 2004, 8:429-445.
    • (2004) Med. Image Anal. , vol.8 , pp. 429-445
    • Tsai, A.1    Wells, W.2    Tempany, C.3    Grimson, E.4    Willsky, A.5
  • 79
    • 41649091676 scopus 로고    scopus 로고
    • Brain anatomical structure segmentation by hybrid discriminative/generative models
    • Tu Z., Narr K., Dollár P., Dinov I., Thompson P., Toga A. Brain anatomical structure segmentation by hybrid discriminative/generative models. IEEE Trans. Med. Imaging 2008, 27:495-508.
    • (2008) IEEE Trans. Med. Imaging , vol.27 , pp. 495-508
    • Tu, Z.1    Narr, K.2    Dollár, P.3    Dinov, I.4    Thompson, P.5    Toga, A.6
  • 87
    • 0034745001 scopus 로고    scopus 로고
    • Segmentation of brain MR images through a hidden Markov random field model and the expectation maximization algorithm
    • Zhang Y., Brady M., Smith S. Segmentation of brain MR images through a hidden Markov random field model and the expectation maximization algorithm. IEEE Trans. Med. Imaging 2001, 20:45-57.
    • (2001) IEEE Trans. Med. Imaging , vol.20 , pp. 45-57
    • Zhang, Y.1    Brady, M.2    Smith, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.