Functional categories of root exudate compounds and their relevance to AM fungal growth

Arbuscular Mycorrhizas: Physiology and Function

Volumn , Issue , 2010, Pages 33-56

  Nagahashi, Gerald ^a   Douds, David D ^a   Ferhatoglu, Yurdagul ^b  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b Phenomenome Discoveries   (Canada)

Author keywords

AM fungi; Categories; Components; Exudates; Functions; Identification; Molecular mass; Roots

Indexed keywords

EID: 79955163708     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-90-481-9489-6_2     Document Type: Chapter

References (71)

1. Aharoni A, Ric de Vos CH, Verhoeven HA, Maliepaard CA, Kruppa G, Bino R, Goodenowe DB (2002) Nontargeted metabolome analysis by use of Fourier Transform Ion Cyclotron Mass Spectrometry. Omics J Integr Biol 6:217-234
2. Akiyama K (2007) Chemical identification and functional analysis of apocarotenoids involved in the development of arbuscular mycorrhizal symbiosis. Biosci Biotech Biochem 71:1405-1414
3. Akiyama K, Matsuoka H, Hayashi H (2002) Isolation and identification of a phosphate deficiencyinduced C-glycosylflavonoid that stimulates arbuscular mycorrhiza formation in melon roots. Mol Plant Microbe Interact 15:334-340
4. Akiyama K, Matsuzaki K-I, Hayashi H (2005) Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi. Nature 435:824-827
5. Allen MF, Moore TS Jr, Christensen M (1982) Phytohormone changes in Bouteloua gracilis infected by vesicular-arbuscular mycorrhizae: II Altered levels of gibberellin-like substances and abscisic acid in the host plant. Can J Bot 60:468-471
6. Arai A, Goto Y, Hasegawa A, Hosaka K, Kikuchi H, Oshima Y, Tanaka S, Kubohara Y (2005) Dictyopyrones, novel a-pyronoids isolated from Dictyostelium ssp., promote stalk cell differentiation in Dictyostelium discoideum. Differentiation 73:377-384
7. Ayman A, Sato D, Kusumoto D, Kamioka H, Takeuchi Y, Yoneyama K (2006) Characterization of strigolactones, germination stimulants for the root parasitic plants Striga and Orobanche, produced by maize, millet and sorghum. Plant Growth Regul 48:221-227
8. Bago B, Bentivenga SP, Brenac V, Dodd JC, Piché Y, Simon L (1998) Molecular analysis of Gigaspora (Glomales, Gigasporaceae). New Phytol 139:581-588.
9. Barea JM, Azcon-Aguilar C (1982) Production of plant growth-regulating substances by the vesicular-arbuscular mycorrhizal fungus Glomus mosseae. Appl Environ Microbiol 43:810-813
10. 2 and root exudates in vesiculararbuscular mycorrhizal symbiosis. Appl Environ Microbiol 55:2320-2325
11. 2 and flavonols. Appl Environ Microbiol 58:821-825
12. Bécard G, Taylor LP, Douds DD Jr, Pfeffer P, Doner L (1995) Flavonoids are not necessary plant signal compounds in arbuscular mycorrhizal symbioses. Molec Plant Microbe Interact 8:252-258
13. Bel Rhid R, Chabot S, Piché Y, Chenevert R (1993) Isolation and identification of flavonoids from Ri T-DNA-transformed roots (Daucus carota) and their significance in vesicular-arbuscular mycorrhizal. Phytochemistry 33:1369-1371
14. Besserer A, Puech-PagésV KP, Gomez-Roldan V, Jauneau A, Roy S, Portais J-C, Roux C, Bécard G, Séjalon-Delmas N (2006) Strigolactones stimulate arbuscular mycorrhizal fungi by activating mitochondria. PLoS Biol 4(7, e 226):1239-1247
15. Buee M, Rossignol M, Jauneau A, Ranjeva R, Becard G (2000) The presymbiotic growth of arbuscular mycorrhizal fungi is induced by a branching factor partially purified from plant root exudates. Molec Plant Microbe Interact 13:693-698
16. Chung M, Kim KH, Ahn JK, Chun SC, Kim CS, Kim JT, Kim SH (2002) Screening of allelochemicals on barnyardgrass (Echinochloa crus-galli) and indentification of potentially allelopathic compounds from rice (Oryza sativa) variety hull extracts. Crop Protect 21:913-920
17. Dormarr JF, Tovell BC, Willms WD (2002) Fingerprint composition of seedling root exudates of selected grasses. J Range Manag 55:420-423
18. Douds DD Jr, Nagahashi G, Abney GD (1996) The differential effects of cell wall-associated phenolics, cell walls, and cytosolic phenolics of host and non-host roots on the growth of two species of AM fungi. New Phytol 133:289-294
19. Dutra PV, Abad M, Almela V, Agusi M (1996) Auxin interactions with the vesicular-arbuscular mycorrhizal fungus Glomus intraradices Schenck and Smith improves vegetative growth of two citrus rootstocks. Scientia Horticulturae 66:77-83
20. El Ghachtouli N, Martin-Tanguy J, Paynot M, Gianinazzi S (1996) First report of the inhibition of arbuscular mycorrhizal infection of Pisum sativum by specific and irreversible inhibition of polyamine biosynthesis or by gibberellic acid treatment. FEBS Lett 385:189-192
21. Elias KS, Safir GR (1987) Hyphal elongation of Glomus fasiculatus in response to root exudates. Appl Environ Microbiol 53:1928-1933
22. Estabrook EM, Yoder JI (1998) Plant-plant communications: rhizosphere signaling between parasitic angiosperms and their hosts. Plant Physiol 116:1-7
23. Fernandez-Aparicio M, Flores F, Rubiales D (2009) Recognition of root exudates by seeds of broomrape (Orobanche and Phelipanche) species. Ann Bot 103:423-431
24. Fester T, Hause B (2007) Drought and symbiosis - why is abscisic acid necessary for arbuscular mycorrhizal? New Phytol 175:383-386
25. Fiehn O (2002) Metabolomics - the link between genotypes and phenotypes. Plant Molec Biol 48:155-171
26. Fiehn O, Kopka J, Dormann P, Altmann T, Trethewey RN, Willmitzer L (2000) Metabolite profiling for plant functional genomics. Nature Biotech 18:1157-1161
27. Giovannetti M, Sbrana C, Avio L, Citernesi AS, Logi C (1993) Differential hyphal morphogenesis in arbuscular-mycorrhizal fungi during pre-infection stages. New Phytol 125:587-593
28. Giovannetti M, Sbrana C, Citernesi AS, Avio L (1996) Analysis of factors involved in fungal recognition responses to host-derived signals by arbuscular mycorrhizal fungi. New Phytol 133:65-71
29. Hause B, Mrosk C, Isayenkov S, Strack D (2007) Jasmonates in arbuscular mycorrhizal associations. Phytochemistry 68:101-110
30. Hirsch AM, Kapulnik Y (1998) Signal transduction pathways in mycorrhizal associations: comparisons with the Rhizobium-legume symbiosis. Fungal Genet Bio 23:205-212
31. Horio T, Kawabata Y, Takayama T, Tahara S, Kawabata J, Fukushi Y, Nishimura H, Mizutani J (1992) A potent attractant of zoospores of Aphanomyces cochlioides isolated from its host, Spinacia oleracea. Experientia 48:410-414
32. Isobe K, Tateishi A, Nomura K, Inoue H, Tsuboki Y (2001) Flavonoids in the extract and root exudate of the roots of leguminous crops. Plant Prod Sci 4:278-279
33. Jenske R, Vetter W (2009) Concentrations of medium-chain 2- and 3-hydroxy fatty acids in foodstuffs. Food Chem 114:112-1129
34. Jentschel K, Theil D, Rehn F, Ludwig-Muller J (2007) Arbuscular mycorrhizal enhances auxin levels and alters auxin biosynthesis in Tropaeolum majus during early stages of colonization. Physiol Plant 129:320-333
35. Jr Frankenberger WT, Arshad M (1995) Microbial synthesis of auxins. In: Frankengerger WT, Arshad M (eds) Phytohormones in soils. Marcel Dekker, New York, pp 35-71
36. Kawai G, Ohnishi M, Fujino Y, Ikeda Y (1986) Stimulatory effect of certain plant sphingolipids on fruiting of Schizophyllum commune. J Biol Chem 261:779-784
37. Kikuchi K, Matsushita N, Suzuki K, Hogetsu T (2007) Flavonoids induce germination of basidiospores of the ectomycorrhizal fungus Suillus bovinus. Mycorrhiza 17:563-570
38. Kuwada K, Kuramoto M, Utamura M, Matsushita I, Ishii T (2006) Isolation and structural elucidation of a growth stimulant for arbuscular mycorrhizal fungus from Laminaria japonica Areschoug. J Appl Phycol 18:795-800
39. Lucas Garcia JA, Barbas C, Probanza A, Barrientos ML, Gutierrez Manero FJ (2000) Low molecular weight organic acids and fatty acids in root exudates of two Lupinus cultivars at flowering and fruiting stages. Phytochem Anal 12:305-311
40. Ludwig-Muller J (2000) Hormonal balance in plants during colonization by mycorrhizal fungi. In: Kapulnik Y, Douds DD Jr (eds) Arbuscular mycorrhizas: physiology and function. Kluwer, Boston/London/Dordrecht, pp 263-285
41. Mada RJ, Bagyaraj DJ (1993) Root exudation from Leucaena leucocephala in relation to mycorrhizal colonization. World J Micro Biotech 9:342-344
42. Maeda Y, Kikuchi H, Sasaki K, Amagai A, Sekiya J, Takaya Y, Ohima Y (2003) Multiple activities of a novel substance, dictyopyrone C (DPC) isolated from Dictyostelium discoideum, in cellular growth and differentiation. Protoplasma 221:185-192
43. Matusova R, Rani K, Verstappen FWA, Franssen MCR, Beale MH, Bouwmeester H (2005) The strigolactone germination stimulants of the plant-parasitic Striga and Orobanche spp. are derived from the carotenoid pathway. Plant Physiol 139:920-934
44. Mungur R, Glass ADM, Goodenow DB, Lightfoot DA (2005) Metabolite fingerprinting in transgenic Nicotiana tabacum by the Escherichia coli glutmate dehydrogenase gene. J Biomed Biotech 2:198-214
45. Nagahashi G, Douds DD Jr (1999) A rapid and sensitive bioassay to study signals between root exudates and arbuscular mycorrhizal fungi. Biotech Tech 13:893-897
46. Nagahashi G, Douds DD Jr (2000) Partial separation of root exudate components and their effects upon the growth of germinated spores of AM fungi. Mycol Res 104:1453-1464
47. Nagahashi G, Douds DD Jr (2007) Separated components of root exudate and cytosol stimulate different morphologically identifiable types of branching responses by arbuscular mycorrhizal fungi. Mycol Res 111:487-492
48. Nagahashi G, Abney G, Doner LW (1996) A comparative study of phenolic acids associated with cell walls and cytoplasmic extracts of host and non-host roots for AM fungi. New Phytol 133:281-288
49. Nair MG, Safir G, Siqueira JO (1991) Isolation and identification of vesicular-arbuscular mycorrhiza-stimulatory compounds from clover (Trifolium repens) roots. Appl Environ Microbiol 57:434-439
50. Perry LG, Weir TL, Prithiviraj B, Paschke MW, Vivanco JM (2006) Root exudation and rhizosphere biology: multiple functions of a plant secondary metabolite. In: Baluska F, Mancuso S, Volkmann D (eds) Communication in plants. Springer-Verlag, Berlin/Heidelberg, pp 403-420
51. 2 enrichment. J Chem Ecol 19:2317-2327
52. Roessner U, Luedemann A, Brust D, Fiehn O, Linke T, Willmitzer Fernie AR (2001) Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems. Plant Cell 13:11-29
53. Scervino JM, Ponce MA, Erra-Bassells R, Vierheilig H, Ocampo JA, Godeas A (2005) Flavonoids exhibit fungal species and genus specific effects on the presymbiotic growth of Gigaspora and Glomus. Mycol Res 109:789-794
54. Scervino JM, Ponce MA, Erra-Bassells MJ, Vierheilig H, Ocampo JA, Godeas A (2006) Glycosidation of apigenin results in a loss of its activity on different growth parameters of arbuscular mycorrhizal fungi from the genus Glomus and Gigaspora. Experientia 48:410-414
55. Scervino JM, Ponce M, Erra-Bassells R, Bompadre J, Vierheilig H, Ocampo JA, Godeas A (2007) The effect of flavones and flavonols on the colonization of tomato plants by arbuscular mycorrhizal fungi of the genera Gigaspora and Glomus. Can J Microbiol 53:702-709
56. Shaul-Keinan O, Gadkar V, Ginzberg I, Grunzweig JM, Chet I, Elad Y, Wininger S, Belausov E, Eshed Y, Atzmon N, Ben-Tal Y, Kapulnik Y (2002) Hormone concentrations in tobacco roots change during arbuscular mycorrhizal colonization with Glomus intraradices. New Phytol 154:501-507
57. Sjögren J, Magnusson J, Broberg A, Kenne JS (2003) Antifungal 3-hydroxy fatty acids from Lactobacillus planta. Appl Environ Microbiol 69:7554-7557
58. Sumner LW, Mendes P, Ra D (2003) Plant metabolomics: large scale phytochemistry in the functional genomics era. Phytochemistry 62:817-836
59. Tawaraya K, Hashimoto K, Wagatsuma T (1998) Effect of root exudate fractions from P-deficient and P-sufficient onion plants on root colonization by the arbuscular mycorrhizal fungus Gigspora margarita. Mycorrhiza 8:67-70
60. Trépanier M, Bécard G, Moutoglis P, Willemot C, Gagné S, Avis TJ, Rioux J-A (2005) Dependence of arbuscular-mycorrhizal fungi on their plant host for palmitic acid synthesis. Appl Environ Microbiol 71:5341-5347
61. Tsitsigiannis DI, Keller NP (2007) Oxylipins as developmental and host-fungal communication signals. Trends Micro 15:109-118
62. Tweeddale H, Notley-McRobb L, Ferenci T (1996) Effect of slow growth on metabolism of Escherichia coli as revealed by global metabolite pool ("metabolome") analysis. J Bact 180:5109-5116
63. Walker TS, Bais HP, Grotewold E, Vivanco JM (2003a) Root exudation and rhizophere biology. Plant Physiol 132:44-51
64. Walker TS, Bais HP, Halligan KM, Stermitz FR, Vivanco JM (2003b) Metabolic profiling of root exudates of Arabidopsis thaliana. J Agric Food Chem 51:2548-2554
65. Worsham AD, Klingman GC, Moreland DE (1962) Promotion of germination of Striga asiatica seed by coumarin derivatives and effects on seedling development. Nature 195:199-201
66. Yamane A, Nishimura H, Mizutani J (1992) Allelopathy of yellow fieldgrass (Rorippa sylvestris): identification and characterization of phytotoxic constituents. J Chem Ecol 18:683-691
67. Yasuda N, Sugimoto Y, Kato IS, Yoneyama K (2003) (+)-Strigol, a witchweed seed germination stimulant, from Menispermum dauricum root culture. Phytochemistry 62:1115-1119
68. Yoneyama K, Sato D, Takeuchi Y, Sekimoto H, Yokota T, Sassa T (2006) Search for germination stimulants and inhibitors for parasitic weeds. In: Duke SO, Rimando A (eds) Natural products for pest management. ACS, Washington, DC, pp 88-98
69. Yoneyama K, Xie X, Kusumoto D, Sekimoto H, Sugimoto Y, Takeuchi Y, Yoneyama K (2007a) Nitrogen deficiency as well as phosphorus deficiency in sorghum promotes the production and exudation of 5-deoxystrigol, the host recognition signal for arbuscular mycorrhizal fungi and root parasites. Planta 227:125-132
70. Yoneyama K, Yoneyama K, Takeuchi Y, Sekimoto H (2007b) Phosphorus deficiency in red clover promotes exudation of orobanchol, the signal for mycorrhizal symbionts and germination stimulant for root parasites. Planta 225:1031-1038
71. Zulak KG, Cornish C, Daskalchuk TE, Deyholos MK, Goodenowe DB, Gordon PMK, Klassen D, Pelcher L, Sensen CW, Facchini PJ (2007) Gene transcript and metabolite profiling of elicitorinduced opium poppy cell cultures reveals the coordinate regulation of primary and secondary metabolism. Planta 225:1085-1096