-
1
-
-
56949107362
-
Chemolithoautotrophic oxidation of thiosulfate and phylogenetic distribution of sulfur oxidation gene (soxB) in rhizobacteria isolated from crop plants
-
Anandham R., Indira Gandhi P., Madhaiyan M., Ryu K.Y., Jee H.J., Sa T.M. Chemolithoautotrophic oxidation of thiosulfate and phylogenetic distribution of sulfur oxidation gene (soxB) in rhizobacteria isolated from crop plants. Res. Microbiol. 2008, 159:579-589.
-
(2008)
Res. Microbiol.
, vol.159
, pp. 579-589
-
-
Anandham, R.1
Indira Gandhi, P.2
Madhaiyan, M.3
Ryu, K.Y.4
Jee, H.J.5
Sa, T.M.6
-
2
-
-
71449118073
-
Mixotrophic metabolism in Burkholderia kururiensis subsp. thiooxydans subsp. nov., a facultative chemolithoautotrophic thiosulfate oxidizing bacterium isolated from rhizosphere soil and proposal for classification of the type strain of Burkholderia kururiensis as Burkholderia kururiensis subsp. kururiensis subsp. nov
-
Anandham R., Indira Gandhi P., Kwon3 S.W., Sa T.M., Kim Y.K., Jee H.J. Mixotrophic metabolism in Burkholderia kururiensis subsp. thiooxydans subsp. nov., a facultative chemolithoautotrophic thiosulfate oxidizing bacterium isolated from rhizosphere soil and proposal for classification of the type strain of Burkholderia kururiensis as Burkholderia kururiensis subsp. kururiensis subsp. nov. Arch. Microbiol. 2009, 191:885-894.
-
(2009)
Arch. Microbiol.
, vol.191
, pp. 885-894
-
-
Anandham, R.1
Indira Gandhi, P.2
Kwon3, S.W.3
Sa, T.M.4
Kim, Y.K.5
Jee, H.J.6
-
3
-
-
0030801002
-
Gapped BLAST and PSI-BLAST; a new generation of protein database search programs
-
Atschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST; a new generation of protein database search programs. Nucleic. Acids. Res. 1997, 25:3389-3402.
-
(1997)
Nucleic. Acids. Res.
, vol.25
, pp. 3389-3402
-
-
Atschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
4
-
-
0037447834
-
Microbial communities in acid mine drainage. FEMS
-
Baker B.J., Banfield J.F. Microbial communities in acid mine drainage. FEMS. Microbiol. Ecol. 2003, 44:139-152.
-
(2003)
Microbiol. Ecol.
, vol.44
, pp. 139-152
-
-
Baker, B.J.1
Banfield, J.F.2
-
5
-
-
34547789876
-
Fluctuation in recoverable nickel and zinc resistant copiotrophic bacteria explained by the varying zinc ion content of Torsa river in different months
-
Bhadra B., Nanda A.K., Chakraborty R. Fluctuation in recoverable nickel and zinc resistant copiotrophic bacteria explained by the varying zinc ion content of Torsa river in different months. Arch. Microbiol. 2007, 188:215-224.
-
(2007)
Arch. Microbiol.
, vol.188
, pp. 215-224
-
-
Bhadra, B.1
Nanda, A.K.2
Chakraborty, R.3
-
6
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 1976, 72:248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
7
-
-
1842362290
-
Complete nucleotide sequence of a 16S ribosomal rRNA gene from Escherichia coli
-
Brosius J., Palmer M.L., Kennedy P.J., Noller H.F. Complete nucleotide sequence of a 16S ribosomal rRNA gene from Escherichia coli. Proc. Natl. Acad. Sci. USA 1978, 75:4801-4805.
-
(1978)
Proc. Natl. Acad. Sci. USA
, vol.75
, pp. 4801-4805
-
-
Brosius, J.1
Palmer, M.L.2
Kennedy, P.J.3
Noller, H.F.4
-
8
-
-
0036281237
-
Aciduric Proteobacteria isolated from pH 2.9 soil
-
Curtis P., Nakatsu C.H., Konopka A. Aciduric Proteobacteria isolated from pH 2.9 soil. Arch. Microbiol. 2002, 178:65-70.
-
(2002)
Arch. Microbiol.
, vol.178
, pp. 65-70
-
-
Curtis, P.1
Nakatsu, C.H.2
Konopka, A.3
-
9
-
-
0030459663
-
Insertional gene inactivation in a phototrophic sulfur bacterium: APS-reductase-deficient mutants of Chromatium vinosum
-
Dahl C. Insertional gene inactivation in a phototrophic sulfur bacterium: APS-reductase-deficient mutants of Chromatium vinosum. Microbiology 1996, 142:3363-3372.
-
(1996)
Microbiology
, vol.142
, pp. 3363-3372
-
-
Dahl, C.1
-
10
-
-
34249729451
-
The S4-intermediate pathway for the oxidation of thiosulfate by the chemolithoautotroph Tetrathiobacter kashmirensis and inhibition of tetrathionate oxidation by sulfite
-
Dam B., Mandal S., Ghosh W., Das Gupta S.K., Roy P. The S4-intermediate pathway for the oxidation of thiosulfate by the chemolithoautotroph Tetrathiobacter kashmirensis and inhibition of tetrathionate oxidation by sulfite. Res. Microbiol. 2007, 158:330-338.
-
(2007)
Res. Microbiol.
, vol.158
, pp. 330-338
-
-
Dam, B.1
Mandal, S.2
Ghosh, W.3
Das Gupta, S.K.4
Roy, P.5
-
11
-
-
0020933869
-
Parsimony in systematics; biological and statistical issues
-
Felsenstein J. Parsimony in systematics; biological and statistical issues. Ann. Rev. Ecol. Syst. 1983, 14:313-333.
-
(1983)
Ann. Rev. Ecol. Syst.
, vol.14
, pp. 313-333
-
-
Felsenstein, J.1
-
13
-
-
0035408581
-
Oxidation of inorganic sulfur compounds by bacteria: emergence of a common mechanism?
-
Friedrich C.G., Rother D., Bardischewsky F., Quentmeier A., Fischer J. Oxidation of inorganic sulfur compounds by bacteria: emergence of a common mechanism?. Appl. Environ. Microbiol. 2001, 67:2873-2882.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 2873-2882
-
-
Friedrich, C.G.1
Rother, D.2
Bardischewsky, F.3
Quentmeier, A.4
Fischer, J.5
-
14
-
-
70349781896
-
The role of Acidithiobacillus ferrooxidans in alleviating the inhibitory effect of thiosulfate on the growth of acidophilic Acidiphilium species isolated from acid mine drainage samples from Garubathan, India
-
Gurung A., Chakraborty R. The role of Acidithiobacillus ferrooxidans in alleviating the inhibitory effect of thiosulfate on the growth of acidophilic Acidiphilium species isolated from acid mine drainage samples from Garubathan, India. Can. J. Microbiol. 2009, 55:1040-1048.
-
(2009)
Can. J. Microbiol.
, vol.55
, pp. 1040-1048
-
-
Gurung, A.1
Chakraborty, R.2
-
15
-
-
33749989029
-
Thiosulfate oxidation in the phototrophic sulfur bacterium Allochromatium vinosum
-
Hensen D., Sperling D., Trüper H.G., Brune D.C., Dahl C. Thiosulfate oxidation in the phototrophic sulfur bacterium Allochromatium vinosum. Mol. Microbiol. 2006, 62:794-810.
-
(2006)
Mol. Microbiol.
, vol.62
, pp. 794-810
-
-
Hensen, D.1
Sperling, D.2
Trüper, H.G.3
Brune, D.C.4
Dahl, C.5
-
16
-
-
24644439237
-
Characteristics of sulfur oxidation by a newly isolated Burkholderia spp
-
Jung S.J., Jang K.H., Sihn E.H., Park S.K. Characteristics of sulfur oxidation by a newly isolated Burkholderia spp. J. Microbiol. Biotechnol. 2005, 15:716-721.
-
(2005)
J. Microbiol. Biotechnol.
, vol.15
, pp. 716-721
-
-
Jung, S.J.1
Jang, K.H.2
Sihn, E.H.3
Park, S.K.4
-
17
-
-
0031032795
-
Oxidative metabolism of inorganic sulfur compounds by bacteria
-
Kelly D.P., Shergill J.K., Lu W.P., Wood A.P. Oxidative metabolism of inorganic sulfur compounds by bacteria. Antonie Van Leeuwenhoek 1997, 71:95-107.
-
(1997)
Antonie Van Leeuwenhoek
, vol.71
, pp. 95-107
-
-
Kelly, D.P.1
Shergill, J.K.2
Lu, W.P.3
Wood, A.P.4
-
18
-
-
77949599376
-
Characterization of a novel trimethoprim resistance gene, dfrA28, in class 1 integron of an oligotrophic Acinetobacter johnsonii strain, MB52, isolated from river Mahananda, India
-
Kumar A., Mukherjee S., Chakraborty R. Characterization of a novel trimethoprim resistance gene, dfrA28, in class 1 integron of an oligotrophic Acinetobacter johnsonii strain, MB52, isolated from river Mahananda, India. Microb. Drug Resist. 2010, 16:29-37.
-
(2010)
Microb. Drug Resist.
, vol.16
, pp. 29-37
-
-
Kumar, A.1
Mukherjee, S.2
Chakraborty, R.3
-
19
-
-
0003735885
-
Cellular location and partial purification of the 'thiosulphate-oxidizing enzyme' and 'trithionate hydrolase' from Thiobacillus tepidarius
-
Lu W.P., Kelly D.P. Cellular location and partial purification of the 'thiosulphate-oxidizing enzyme' and 'trithionate hydrolase' from Thiobacillus tepidarius. J. Gen. Microbiol. 1988, 134:877-885.
-
(1988)
J. Gen. Microbiol.
, vol.134
, pp. 877-885
-
-
Lu, W.P.1
Kelly, D.P.2
-
20
-
-
85010439719
-
A procedure for the isolation of deoxyribonucleic acid from microorganisms
-
Marmur J. A procedure for the isolation of deoxyribonucleic acid from microorganisms. J. Mol. Biol. 1961, 3:208-218.
-
(1961)
J. Mol. Biol.
, vol.3
, pp. 208-218
-
-
Marmur, J.1
-
21
-
-
0017832015
-
Organic nutrition of chemolithotrophic bacteria
-
Matin A. Organic nutrition of chemolithotrophic bacteria. Annu. Rev. Microbiol. 1978, 32:433-468.
-
(1978)
Annu. Rev. Microbiol.
, vol.32
, pp. 433-468
-
-
Matin, A.1
-
22
-
-
35448951067
-
Molecular analysis of the distribution and phylogeny of the soxB gene among sulfur-oxidizing bacteria- evolution of the Sox sulfur oxidation enzyme system
-
Meyer B., Imhoff J.F., Kuever J. Molecular analysis of the distribution and phylogeny of the soxB gene among sulfur-oxidizing bacteria- evolution of the Sox sulfur oxidation enzyme system. Environ. Microbiol. 2007, 9:2957-2977.
-
(2007)
Environ. Microbiol.
, vol.9
, pp. 2957-2977
-
-
Meyer, B.1
Imhoff, J.F.2
Kuever, J.3
-
23
-
-
33645034091
-
Incidence of class 1 integrons in multiple antibiotic-resistant gram-negative copiotrophic bacteria from the river Torsa in India
-
Mukherjee S., Chakraborty R. Incidence of class 1 integrons in multiple antibiotic-resistant gram-negative copiotrophic bacteria from the river Torsa in India. Res. Microbiol. 2006, 157:220-226.
-
(2006)
Res. Microbiol.
, vol.157
, pp. 220-226
-
-
Mukherjee, S.1
Chakraborty, R.2
-
24
-
-
0033927420
-
A soxA gene encoding a diheme cytochrome c and a sox locus, essential for sulfur oxidation in new sulfur lithotrophic bacterium
-
Mukhopadhyaya P.N., Deb C., Lahiri C., Roy P. A soxA gene encoding a diheme cytochrome c and a sox locus, essential for sulfur oxidation in new sulfur lithotrophic bacterium. J. Bacteriol. 2000, 182:4278-4287.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 4278-4287
-
-
Mukhopadhyaya, P.N.1
Deb, C.2
Lahiri, C.3
Roy, P.4
-
25
-
-
0018080902
-
Dissolution of pyrite (FeS2) pure and mixed cultures of some acidophilic bacteria
-
Norris P.R., Kelly D.P. Dissolution of pyrite (FeS2) pure and mixed cultures of some acidophilic bacteria. FEMS Microbiol. Lett. 1978, 4:143-146.
-
(1978)
FEMS Microbiol. Lett.
, vol.4
, pp. 143-146
-
-
Norris, P.R.1
Kelly, D.P.2
-
26
-
-
60849116674
-
A novel laboratory cultivation method to examine antibiotic-resistance-related microbial risks in urban water environments
-
Oh H., Lee J., Kim K., Kim J., Choung Y., Park J. A novel laboratory cultivation method to examine antibiotic-resistance-related microbial risks in urban water environments. Water Sci. Technol. 2009, 59:346-352.
-
(2009)
Water Sci. Technol.
, vol.59
, pp. 346-352
-
-
Oh, H.1
Lee, J.2
Kim, K.3
Kim, J.4
Choung, Y.5
Park, J.6
-
27
-
-
63649152969
-
Genus I. Burkholderia Yabuuchi et al. 1993
-
Springer Science + Business, Inc, NewYork, J.T. Staley (Ed.)
-
Palleroni N.J. Genus I. Burkholderia Yabuuchi et al. 1993. Bergey's Manual of Systemic Bacteriology 2005, 575-599. Springer Science + Business, Inc, NewYork. J.T. Staley (Ed.).
-
(2005)
Bergey's Manual of Systemic Bacteriology
, pp. 575-599
-
-
Palleroni, N.J.1
-
28
-
-
64549112999
-
Thiosulfate oxidation by Comamonas sp. S23 isolated from sulfur spring
-
Pandey S.K., Narayan K.D., Bandopadhyay S., Nayak K.C., Das S.K. Thiosulfate oxidation by Comamonas sp. S23 isolated from sulfur spring. Curr. Microbiol. 2009, 58:516-521.
-
(2009)
Curr. Microbiol.
, vol.58
, pp. 516-521
-
-
Pandey, S.K.1
Narayan, K.D.2
Bandopadhyay, S.3
Nayak, K.C.4
Das, S.K.5
-
29
-
-
0035853451
-
Phylogeny and distribution of the soxB gene among thiosulfate-oxidizing bacteria
-
Petri R., Podgorsek L., Imhoff J.F. Phylogeny and distribution of the soxB gene among thiosulfate-oxidizing bacteria. FEMS Microbial. Lett. 2001, 197:171-178.
-
(2001)
FEMS Microbial. Lett.
, vol.197
, pp. 171-178
-
-
Petri, R.1
Podgorsek, L.2
Imhoff, J.F.3
-
30
-
-
0031864741
-
Sulfide oxidation in the phototrophic sulfur bacterium Chromatium vinosum
-
Reinartz M., Tschape J., Bruser T., Trüper H.G., Dahl C. Sulfide oxidation in the phototrophic sulfur bacterium Chromatium vinosum. Arch. Microbiol. 1998, 170:59-68.
-
(1998)
Arch. Microbiol.
, vol.170
, pp. 59-68
-
-
Reinartz, M.1
Tschape, J.2
Bruser, T.3
Trüper, H.G.4
Dahl, C.5
-
31
-
-
0023375195
-
The neighbor-joining method; a new method for reconstructing phylogenetic trees
-
Saitou N., Nei M. The neighbor-joining method; a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 1987, 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
32
-
-
0028855307
-
Oligotrophic bacteria isolated from clinical materials
-
Tada Y., Ihmori M., Yamaguchi J. Oligotrophic bacteria isolated from clinical materials. J. Clin. Microbiol. 1995, 33:493-494.
-
(1995)
J. Clin. Microbiol.
, vol.33
, pp. 493-494
-
-
Tada, Y.1
Ihmori, M.2
Yamaguchi, J.3
-
33
-
-
0031574072
-
The CLUSTAL_X windows interface; flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The CLUSTAL_X windows interface; flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic. Acids Res. 1997, 25:4876-4882.
-
(1997)
Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
34
-
-
0009612516
-
Thiosulfate oxidation and cytochromes in ThiobacillusX2. thiosulfate oxidizing enzyme
-
Trudinger P.A. Thiosulfate oxidation and cytochromes in ThiobacillusX2. thiosulfate oxidizing enzyme. Biochem. J. 1961, 78:680-686.
-
(1961)
Biochem. J.
, vol.78
, pp. 680-686
-
-
Trudinger, P.A.1
-
35
-
-
33750021164
-
Burkholderia ferrariae sp. nov., isolated from an iron ore in Brazil
-
Valverde A., Delvasto P., Peix A., Velá zquez E., Santa-Regina I., Ballester A., Barrueco C.R., Garcá-Balboa C., Igual M.J. Burkholderia ferrariae sp. nov., isolated from an iron ore in Brazil. Int. J. Syst. Evol. Microbiol. 2006, 56:2421-2425.
-
(2006)
Int. J. Syst. Evol. Microbiol.
, vol.56
, pp. 2421-2425
-
-
Valverde, A.1
Delvasto, P.2
Peix, A.3
Velá zquez, E.4
Santa-Regina, I.5
Ballester, A.6
Barrueco, C.R.7
Garcá-Balboa, C.8
Igual, M.J.9
-
36
-
-
0343230361
-
Identification of eubacteria isolated from leaf cavities of four species of the N-fixing Azolla fern as Arthrobacter Conn & Dimmick
-
Wallace W.H., Gates J.E. Identification of eubacteria isolated from leaf cavities of four species of the N-fixing Azolla fern as Arthrobacter Conn & Dimmick. Appl. Environ. Microbiol. 1986, 52:425-429.
-
(1986)
Appl. Environ. Microbiol.
, vol.52
, pp. 425-429
-
-
Wallace, W.H.1
Gates, J.E.2
-
37
-
-
58249126338
-
Microbial communities in acid water environments of two mines, China
-
Xiao S., Xie X., Liu J. Microbial communities in acid water environments of two mines, China. Environ. Pollut. 2009, 157:1045-1050.
-
(2009)
Environ. Pollut.
, vol.157
, pp. 1045-1050
-
-
Xiao, S.1
Xie, X.2
Liu, J.3
|