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Volumn 319, Issue 1, 2011, Pages 11-18

Burkholderia fungorum DBT1: A promising bacterial strain for bioremediation of PAHs-contaminated soils

Author keywords

Bioremediation; Burkholderia cepacia complex; Burkholderia fungorum DBT1; Degradation

Indexed keywords

DNA TOPOISOMERASE (ATP HYDROLYSING) A; NAPHTHALENE; PHENANTHRENE; POLYCYCLIC AROMATIC HYDROCARBON; RECA PROTEIN; RNA 16S;

EID: 79955043826     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/j.1574-6968.2011.02259.x     Document Type: Letter
Times cited : (50)

References (43)
  • 1
    • 41849121236 scopus 로고    scopus 로고
    • Comparative phylogenies of Burkholderia, Ralstonia, Comamonas, Brevundimonas and related organisms derived from rpoB, gyrB and rrs gene sequences
    • Ait Tayeb L, Lefere M, Passet V, Diancourt L, Brisse S & Grimont PAD (2008) Comparative phylogenies of Burkholderia, Ralstonia, Comamonas, Brevundimonas and related organisms derived from rpoB, gyrB and rrs gene sequences. Res Microbiol 159: 169-177.
    • (2008) Res Microbiol , vol.159 , pp. 169-177
    • Ait Tayeb, L.1    Lefere, M.2    Passet, V.3    Diancourt, L.4    Brisse, S.5    Grimont, P.A.D.6
  • 3
    • 0025875752 scopus 로고
    • Comparative analysis of Bacillus anthracis, Bacillus cereus, and related species on the basis of reverse transcriptase sequencing of 16S rRNA
    • Ash C, Farrow JAE, Dorsch M, Stackebrandt E & Collins MD (1991) Comparative analysis of Bacillus anthracis, Bacillus cereus, and related species on the basis of reverse transcriptase sequencing of 16S rRNA. Int J Syst Bacteriol 41: 343-346.
    • (1991) Int J Syst Bacteriol , vol.41 , pp. 343-346
    • Ash, C.1    Farrow, J.A.E.2    Dorsch, M.3    Stackebrandt, E.4    Collins, M.D.5
  • 4
    • 69949104495 scopus 로고    scopus 로고
    • Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation
    • Brennerova MV, Joseflova J, Brenner V, Pieper DH & Junca H (2009) Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation. Environ Microbiol 11: 2216-2227.
    • (2009) Environ Microbiol , vol.11 , pp. 2216-2227
    • Brennerova, M.V.1    Joseflova, J.2    Brenner, V.3    Pieper, D.H.4    Junca, H.5
  • 5
    • 0031919229 scopus 로고    scopus 로고
    • Burkholderia thailandensis sp. nov., a Burkholderia pseudomallei-like species
    • Brett PJ, De Shazer D & Woods DE (1998) Burkholderia thailandensis sp. nov., a Burkholderia pseudomallei-like species. Int J Syst Bacteriol 48: 317-320.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 317-320
    • Brett, P.J.1    De Shazer, D.2    Woods, D.E.3
  • 6
    • 0031025405 scopus 로고    scopus 로고
    • New metabolites in the degradation of fluorene by Arthrobacter sp. strain F101
    • Casellas M, Grifoll M, Bayona JM & Solanis AM (1997) New metabolites in the degradation of fluorene by Arthrobacter sp. strain F101. Appl Environ Microb 63: 819-826.
    • (1997) Appl Environ Microb , vol.63 , pp. 819-826
    • Casellas, M.1    Grifoll, M.2    Bayona, J.M.3    Solanis, A.M.4
  • 8
    • 33847168352 scopus 로고
    • Biodegradation of polycyclic aromatic hydrocarbons
    • Cerniglia CE (1992) Biodegradation of polycyclic aromatic hydrocarbons. Biodegradation 3: 351-368.
    • (1992) Biodegradation , vol.3 , pp. 351-368
    • Cerniglia, C.E.1
  • 9
    • 33745132697 scopus 로고    scopus 로고
    • Microbial dioxygenase gene population shifts during polycyclic aromatic hydrocarbon biodegradation
    • Chadhain SMN, Norman RS, Pesce KV, Kukor JJ & Zylstra GJ (2006) Microbial dioxygenase gene population shifts during polycyclic aromatic hydrocarbon biodegradation. Appl Environ Microb 72: 4078-4087.
    • (2006) Appl Environ Microb , vol.72 , pp. 4078-4087
    • Chadhain, S.M.N.1    Norman, R.S.2    Pesce, K.V.3    Kukor, J.J.4    Zylstra, G.J.5
  • 10
    • 0037632512 scopus 로고    scopus 로고
    • Development of a species-specific recA-based PCR test for Burkholderia fungorum
    • Chan CH, Stead DE & Coutts RHA (2003) Development of a species-specific recA-based PCR test for Burkholderia fungorum. FEMS Microbiol Lett 224: 133-138.
    • (2003) FEMS Microbiol Lett , vol.224 , pp. 133-138
    • Chan, C.H.1    Stead, D.E.2    Coutts, R.H.A.3
  • 11
    • 0034993324 scopus 로고    scopus 로고
    • Burkholderia fungorum sp. nov. and Burkholderia caledonica sp. nov., two new species isolated from the environment, animals and human clinical samples
    • Coenye T, Laevens S, Willems A, Ohlén M, Hannant W, Govan JRW, Gillis M, Falsen E & Vandamme P (2001) Burkholderia fungorum sp. nov. and Burkholderia caledonica sp. nov., two new species isolated from the environment, animals and human clinical samples. Int J Syst Evol Micr 51: 1099-1107.
    • (2001) Int J Syst Evol Micr , vol.51 , pp. 1099-1107
    • Coenye, T.1    Laevens, S.2    Willems, A.3    Ohlén, M.4    Hannant, W.5    Govan, J.R.W.6    Gillis, M.7    Falsen, E.8    Vandamme, P.9
  • 12
    • 0036265949 scopus 로고    scopus 로고
    • Characterization of unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp. nov
    • Coenye T, Goris J, Spilker T, Vandamme P & LiPuma JJ (2002) Characterization of unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp. nov. J Clin Microbiol 40: 2062-2069.
    • (2002) J Clin Microbiol , vol.40 , pp. 2062-2069
    • Coenye, T.1    Goris, J.2    Spilker, T.3    Vandamme, P.4    LiPuma, J.J.5
  • 13
    • 28644451846 scopus 로고    scopus 로고
    • Risk mitigation of genetically modified bacteria and plants designed for bioremediation
    • Davison J (2005) Risk mitigation of genetically modified bacteria and plants designed for bioremediation. J Ind Microbiol Biot 32: 639-650.
    • (2005) J Ind Microbiol Biot , vol.32 , pp. 639-650
    • Davison, J.1
  • 14
    • 0014713693 scopus 로고
    • The quantitative measurement of DNA hybridization from renaturation rates
    • De Ley J, Cattoir H & Reynaerts A (1970) The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12: 133-142.
    • (1970) Eur J Biochem , vol.12 , pp. 133-142
    • De Ley, J.1    Cattoir, H.2    Reynaerts, A.3
  • 15
    • 1542410464 scopus 로고    scopus 로고
    • Identification of two new sets of genes for dibenzothiophene transformation in Burkholderia sp. DBT1
    • Di Gregorio S, Zocca C, Sidler S, Toffanin A, Lizzari D & Vallini G (2004) Identification of two new sets of genes for dibenzothiophene transformation in Burkholderia sp. DBT1. Biodegradation 15: 111-123.
    • (2004) Biodegradation , vol.15 , pp. 111-123
    • Di Gregorio, S.1    Zocca, C.2    Sidler, S.3    Toffanin, A.4    Lizzari, D.5    Vallini, G.6
  • 16
    • 0035101938 scopus 로고    scopus 로고
    • Phenotypic and phylogenetic characterization of Burkholderia (Pseudomonas) sp. strain LB400
    • Fain MG & Haddock JD (2001) Phenotypic and phylogenetic characterization of Burkholderia (Pseudomonas) sp. strain LB400. Curr Microbiol 42: 269-275.
    • (2001) Curr Microbiol , vol.42 , pp. 269-275
    • Fain, M.G.1    Haddock, J.D.2
  • 21
    • 0030761554 scopus 로고    scopus 로고
    • Four additional cases of Burkholderia gladioli infection with microbiological correlates and review
    • Graves M, Robin T, Chipman AM, Wong J, Khashe S & Janda JM (1997) Four additional cases of Burkholderia gladioli infection with microbiological correlates and review. Clin Infect Dis 25: 838-842.
    • (1997) Clin Infect Dis , vol.25 , pp. 838-842
    • Graves, M.1    Robin, T.2    Chipman, A.M.3    Wong, J.4    Khashe, S.5    Janda, J.M.6
  • 22
    • 0020549589 scopus 로고
    • Studies on the spectrophotometric determination of DNA hybridization from renaturation rates
    • Huss VAR, Festl H & Schleifer KH (1983) Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4: 184-192.
    • (1983) Syst Appl Microbiol , vol.4 , pp. 184-192
    • Huss, V.A.R.1    Festl, H.2    Schleifer, K.H.3
  • 24
    • 0017807466 scopus 로고
    • The catabolism of phenanthrene and naphthalene by bacteria
    • Kiyohara H & Nagao K (1977) The catabolism of phenanthrene and naphthalene by bacteria. J Gen Microbiol 105: 69-75.
    • (1977) J Gen Microbiol , vol.105 , pp. 69-75
    • Kiyohara, H.1    Nagao, K.2
  • 25
    • 0020032152 scopus 로고
    • Phenanthrene degrading phenotype of Alcaligenes faecalis AFK2
    • Kiyohara H, Nagao K, Kouno K & Yano K (1982) Phenanthrene degrading phenotype of Alcaligenes faecalis AFK2. Appl Environ Microb 43: 458-461.
    • (1982) Appl Environ Microb , vol.43 , pp. 458-461
    • Kiyohara, H.1    Nagao, K.2    Kouno, K.3    Yano, K.4
  • 26
    • 84996352276 scopus 로고
    • Microbial conversion of petro-sulfur compounds. Part III. Isolation and identification of products from dibenzothiophene
    • Kodama K, Nakatani S, Umehara K, Shimizu K, Minoda Y & Yamada K (1970) Microbial conversion of petro-sulfur compounds. Part III. Isolation and identification of products from dibenzothiophene. Agr Biol Chem 34: 1320-1324.
    • (1970) Agr Biol Chem , vol.34 , pp. 1320-1324
    • Kodama, K.1    Nakatani, S.2    Umehara, K.3    Shimizu, K.4    Minoda, Y.5    Yamada, K.6
  • 27
    • 0015822179 scopus 로고
    • Identification of microbial products from dibenzothiophene and its proposed oxidation pathway
    • Kodama K, Umehara K, Shimizu K, Nakatani S, Minoda Y & Yamada K (1973) Identification of microbial products from dibenzothiophene and its proposed oxidation pathway. Agr Biol Chem 37: 45-50.
    • (1973) Agr Biol Chem , vol.37 , pp. 45-50
    • Kodama, K.1    Umehara, K.2    Shimizu, K.3    Nakatani, S.4    Minoda, Y.5    Yamada, K.6
  • 29
    • 77249165590 scopus 로고    scopus 로고
    • Identification of tomato plant as a novel host model for Burkholderia pseudomallei
    • Lee YH, Chen Y, Ouyang X & Gan Y-H (2010) Identification of tomato plant as a novel host model for Burkholderia pseudomallei. BMC Microbiol 10: 28.
    • (2010) BMC Microbiol , vol.10 , pp. 28
    • Lee, Y.H.1    Chen, Y.2    Ouyang, X.3    Gan, Y.-H.4
  • 30
    • 0000889734 scopus 로고    scopus 로고
    • Bioremediation of environment contaminated by polycyclic aromatic hydrocarbon
    • (Crawford RL & Crawford DL, eds) - Cambridge University Press, Cambridge.
    • Mueller JG, Cerniglia CE & Pritchard PH (1996) Bioremediation of environment contaminated by polycyclic aromatic hydrocarbon. Bioremediation: Principles and Applications (Crawford RL & Crawford DL, eds), pp. 125-194. Cambridge University Press, Cambridge.
    • (1996) Bioremediation: Principles and Applications , pp. 125-194
    • Mueller, J.G.1    Cerniglia, C.E.2    Pritchard, P.H.3
  • 32
    • 0034794149 scopus 로고    scopus 로고
    • Diversity of the Burkholderia cepacia complex and implications for risk assessment of biological control strains
    • Parke JL & Gurian-Sherman D (2001) Diversity of the Burkholderia cepacia complex and implications for risk assessment of biological control strains. Annu Rev Phytopathol 39: 225-258.
    • (2001) Annu Rev Phytopathol , vol.39 , pp. 225-258
    • Parke, J.L.1    Gurian-Sherman, D.2
  • 35
    • 33748551051 scopus 로고    scopus 로고
    • Novel upper meta-pathway extradiol dioxygenase gene diversity in polluted soil
    • Sipilä TP, Riisiö H & Yrjälä K (2006) Novel upper meta-pathway extradiol dioxygenase gene diversity in polluted soil. FEMS Microbiol Ecol 58: 134-144.
    • (2006) FEMS Microbiol Ecol , vol.58 , pp. 134-144
    • Sipilä, T.P.1    Riisiö, H.2    Yrjälä, K.3
  • 37
    • 0344126423 scopus 로고
    • Identification of sulfur compound in petroleum and alternative fossil fuel
    • Freidlina RK & Skorova AE, eds) - Pergamon Press, Oxford.
    • Thompson CJ (1981) Identification of sulfur compound in petroleum and alternative fossil fuel. Organic Sulfur Chemistry (Freidlina RK & Skorova AE, eds), pp. 189-208. Pergamon Press, Oxford.
    • (1981) Organic Sulfur Chemistry , pp. 189-208
    • Thompson, C.J.1
  • 41
    • 0030827928 scopus 로고    scopus 로고
    • Occurrence of multiple genomovars of Burkholderia cepacia in cystic fibrosis patients and proposal of Burkholderia multivorans sp. nov
    • Vandamme P, Holmes B, Vancanneyt M et al. (1997) Occurrence of multiple genomovars of Burkholderia cepacia in cystic fibrosis patients and proposal of Burkholderia multivorans sp. nov. Int J Syst Bacteriol 47: 1188-1200.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 1188-1200
    • Vandamme, P.1    Holmes, B.2    Vancanneyt, M.3
  • 42
    • 0000770675 scopus 로고
    • International committee on systematic bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
    • Wayne LG, Brenner DJ & Colwell RR (1987) International committee on systematic bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37: 463-464.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 463-464
    • Wayne, L.G.1    Brenner, D.J.2    Colwell, R.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.