Genomic mechanisms of evolved physiological plasticity in killifish distributed along an environmental salinity gradient

Proceedings of the National Academy of Sciences of the United States of America

Volumn 108, Issue 15, 2011, Pages 6193-6198

  Whitehead, Andrew ^a   Roach, Jennifer L ^a   Zhang, Shujun ^a   Galvez, Fernando ^a  

^a LOUISIANA STATE UNIVERSITY   (United States)

Author keywords

Adaptive acclimation; Ecological genomics; Microarray

Indexed keywords

FRESH WATER;

CONFERENCE PAPER; CYPRINODONTIFORMES; FRESHWATER FISH; FUNDULUS HETEROCLITUS; GENOMICS; HABITAT; HOMEOSTASIS; HYPOOSMOTIC STRESS; NONHUMAN; PLASTICITY; POPULATION; PRIORITY JOURNAL; SALINITY;

CYPRINODONTOIDEI; FUNDULUS HETEROCLITUS;

EID: 79954995183     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1017542108     Document Type: Article

References (51)

1. itehead A (2010) The evolutionary radiation of diverse osmotolerant physiologies in killifish (Fundulus sp.). Evolution 64:2070-2085.
2. Kaneko T, Katoh F (2004) Functional morphology of chloride cells in killifish Fundulus heteroclitus, a euryhaline teleost with seawater preference. Fish Sci 70:723-733. (Pubitemid 39448041)
3. Wood CM, Grosell M (2009) TEP on the tide in killifish (Fundulus heteroclitus): Effects of progressively changing salinity and prior acclimation to intermediate or cycling salinity. J Comp Physiol B 179:459-467.
4. Wood CM, Grosell M (2008) A critical analysis of transepithelial potential in intact killifish (Fundulus heteroclitus) subjected to acute and chronic changes in salinity. J Comp Physiol B 178:713-727.
5. Copeland DE (1950) Adaptive behavior of the chloride cell in the gill of Fundulus heteroclitus. J Morphol 87:369-379.
6. Philpott CW, Copeland DE (1963) Fine structure of chloride cells from three species of Fundulus. J Cell Biol 18:389-404.
7. Choe KP, et al. (2005) NHE3 in an ancestral vertebrate: Primary sequence, distribution, localization, and function in gills. Am J Physiol Regul Integr Comp Physiol 289: R1520-R1534. (Pubitemid 41507419)
8. Wilson JM, Laurent P (2002) Fish gill morphology: Inside out. J Exp Zool 293:192-213. (Pubitemid 34780357)
9. Kidder GW, 3rd, Petersen CW, Preston RL (2006) Energetics of osmoregulation: I. Oxygen consumption by Fundulus heteroclitus. J Exp Zoolog A Comp Exp Biol 305:309-317.
10. Kidder GW, 3rd, Petersen CW, Preston RL (2006) Energetics of osmoregulation: II. Water flux and osmoregulatory work in the euryhaline fish, Fundulus heteroclitus. J Exp Zoolog A Comp Exp Biol 305:318-327.
11. Bekkevold D, et al. (2005) Environmental correlates of population differentiation in Atlantic herring. Evolution 59:2656-2668. (Pubitemid 43069946)
12. McCairns RJS, Bernatchez L (2008) Landscape genetic analyses reveal cryptic population structure and putative selection gradients in a large-scale estuarine environment. Mol Ecol 17:3901-3916.
13. Evans DH, Piermarini PM, Choe KP (2005) The multifunctional fish gill: Dominant site of gas exchange, osmoregulation, acid-base regulation, and excretion of nitrogenous waste. Physiol Rev 85:97-177. (Pubitemid 40173994)
14. Whitehead A, Galvez F, Zhang S, Williams LM, Oleksiak MF (2010) Functional genomics of physiological plasticity and local adaptation in killifish. J Hered 10.1093/ jhered/esq077.
15. Hughes I, et al. (2004) Otopetrin 1 is required for otolith formation in the zebrafish Danio rerio. Dev Biol 276:391-402. (Pubitemid 39592402)
16. Hughes I, Saito M, Schlesinger PH, Ornitz DM (2007) Otopetrin 1 activation by purinergic nucleotides regulates intracellular calcium. Proc Natl Acad Sci USA 104: 12023-12028. (Pubitemid 47185623)
17. Marshall WS, Grosell M (2005) Ion transport, osmoregulation, and acid-base balance. Physiology of Fishes, eds Evans DH, Claiborne JB (CRC, Boca Raton, FL), pp 177-230.
18. Matter K, Balda MS (2003) Functional analysis of tight junctions. Methods 30:228-234. (Pubitemid 36677557)
19. Van Itallie CM, Anderson JM (2004) The molecular physiology of tight junction pores. Physiology (Bethesda) 19:331-338. (Pubitemid 39636080)
20. Patrick ML, Part P, Marshall WS, Wood CM (1997) Characterization of ion and acidbase transport in the fresh water adapted mummichog (Fundulus heteroclitus). J Exp Zool 279:208-219. (Pubitemid 27439915)
21. Scott GR, Rogers JT, Richards JG, Wood CM, Schulte PM (2004) Intraspecific divergence of ionoregulatory physiology in the euryhaline teleost Fundulus heteroclitus: possible mechanisms of freshwater adaptation. J Exp Biol 207:3399-3410. (Pubitemid 39348342)
22. Bagherie-Lachidan M, Wright SI, Kelly SP (2008) Claudin-3 tight junction proteins in Tetraodon nigroviridis: cloning, tissue-specific expression, and a role in hydromineral balance. Am J Physiol Regul Integr Comp Physiol 294:R1638-R1647.
23. Evans DH, Piermarini PM, Potts WTW (1999) Ionic transport in the fish gill epithelium. J Exp Zool 283:641-652. (Pubitemid 29194440)
24. Laurent P, Chevalier C, Wood CM (2006) Appearance of cuboidal cells in relation to salinity in gills of Fundulus heteroclitus, a species exhibiting branchial Na+ but not Cluptake in freshwater. Cell Tissue Res 325:481-492. (Pubitemid 44126163)
25. Ahmed S, Brickner JH (2007) Regulation and epigenetic control of transcription at the nuclear periphery. Trends Genet 23:396-402. (Pubitemid 47088012)
26. Shimada Y, Shikano T, Merila J (2011) A high incidence of selection on physiologically important genes in the three-spined stickleback, Gasterosteus aculeatus. Mol Biol Evol 28:181-193.
27. Hoffmann EK, Schettino T, Marshall WS (2007) The role of volume-sensitive ion transport systems in regulation of epithelial transport. Comp Biochem Physiol A Mol Integr Physiol 148:29-43. (Pubitemid 47077657)
28. Marshall WS, Ossum CG, Hoffmann EK (2005) Hypotonic shock mediation by p38 MAPK, JNK, PKC, FAK, OSR1 and SPAK in osmosensing chloride secreting cells of killifish opercular epithelium. J Exp Biol 208:1063-1077. (Pubitemid 40518813)
29. Avella M, Ducoudret O, Pisani DF, Poujeol P (2009) Swelling-activated transport of taurine in cultured gill cells of sea bass: Physiological adaptation and pavement cell plasticity. Am J Physiol Regul Integr Comp Physiol 296:R1149-R1160.
30. Faggian J, Fosang AJ, Zieba M, Wallace MJ, Hooper SB (2007) Changes in versican and chondroitin sulfate proteoglycans during structural development of the lung. Am J Physiol Regul Integr Comp Physiol 293:R784-R792. (Pubitemid 47205064)
31. Michell RH (2008) Inositol derivatives: Evolution and functions. Nat Rev Mol Cell Biol 9:151-161. (Pubitemid 351158916)
32. Poulin R, Wechter RS, Pegg AE (1991) An early enlargement of the putrescine pool is required for growth in L1210 mouse leukemia cells under hypoosmotic stress. J Biol Chem 266:6142-6151. (Pubitemid 21906196)
33. Rhee HJ, Kim EJ, Lee JK (2007) Physiological polyamines: Simple primordial stress molecules. J Cell Mol Med 11:685-703. (Pubitemid 47313311)
34. Capp MW, et al. (1996) Compensating effects of opposing changes in putrescine (2+) and K+ concentrations on lac repressor-lac operator binding: in Vitro thermodynamic analysis and in vivo relevance. J Mol Biol 258:25-36. (Pubitemid 26123407)
35. Prabhu N, Sharp K (2006) Protein-solvent interactions. Chem Rev 106:1616-1623. (Pubitemid 43792774)
36. Shinohara T, Piatigorsky J (1977) Regulation of protein synthesis, intracellular electrolytes and cataract formation in vitro. Nature 270:406-411. (Pubitemid 8229397)
37. Hoffmann EK (1992) Cell swelling and volume regulation. Can J Physiol Pharmacol 70 (Suppl):S310-S313. (Pubitemid 23091639)
38. Greenberg CS, Birckbichler PJ, Rice RH (1991) Transglutaminases: Multifunctional cross-linking enzymes that stabilize tissues. FASEB J 5:3071-3077. (Pubitemid 21892867)
39. Fiol DF, Kültz D (2005) Rapid hyperosmotic coinduction of two tilapia (Oreochromis mossambicus) transcription factors in gill cells. Proc Natl Acad Sci USA 102:927-932. (Pubitemid 40282767)
40. McCormick SD (2001) Endocrine control of osmoregulation in teleost fish. Am Zool 41: 781-794. (Pubitemid 33770250)
41. López-Bojórquez L, Villalobos P, García-G C, Orozco A, Valverde-R C (2007) Functional identification of an osmotic response element (ORE) in the promoter region of the killifish deiodinase 2 gene (FhDio2). J Exp Biol 210:3126-3132. (Pubitemid 47522707)
42. Kitano J, et al. (2010) Adaptive divergence in the thyroid hormone signaling pathway in the stickleback radiation. Curr Biol 20:2124-2130.
43. Evans TG, Somero GN (2008) A microarray-based transcriptomic time-course of hyperand hypoosmotic stress signaling events in the euryhaline fish Gillichthys mirabilis: Osmosensors to effectors. J Exp Biol 211:3636-3649.
44. Fiol DF, Chan SY, Kültz D (2006) Identification and pathway analysis of immediate hyperosmotic stress responsivemolecular mechanisms in tilapia (Oreochromismossambicus) gill. Comp Biochem Physiol Part D Genomics Proteomics 1:344-356. (Pubitemid 44437819)
45. Whitehead A, Crawford DL (2006) Variation within and among species in gene expression: Raw material for evolution. Mol Ecol 15:1197-1211.
46. Fisher MA, Oleksiak MF (2007) Convergence and divergence in gene expression among natural populations exposed to pollution. BMC Genomics 8:108.
47. Oleksiak MF, Churchill GA, Crawford DL (2002) Variation in gene expression within and among natural populations. Nat Genet 32:261-266.
48. Whitehead A, Crawford DL (2006) Neutral and adaptive variation in gene expression. Proc Natl Acad Sci USA 103:5425-5430.
49. Aubin-Horth N, Renn SCP (2009) Genomic reaction norms: Using integrative biology to understand molecular mechanisms of phenotypic plasticity. Mol Ecol 18:3763-3780.
50. Lockwood BL, Sanders JG, Somero GN (2010) Transcriptomic responses to heat stress in invasive and native blue mussels (genus Mytilus): Molecular correlates of invasive success. J Exp Biol 213:3548-3558.
51. Whitehead A, Triant DA, Champlin D, Nacci D (2010) Comparative transcriptomics implicates mechanisms of evolved pollution tolerance in a killifish population. Mol Ecol 19:5186-5203.