Wild sunflower diversity in Argentina revealed by ISSR and SSR markers: An approach for conservation and breeding programmes

Annals of Applied Biology

Volumn 158, Issue 3, 2011, Pages 305-317

  Garayalde, A F ^a   Poverene, M ^a,b   Cantamutto, M ^b   Carrera, A D ^a,b  

^a National University of the South   (Argentina)

^b UNIVERSIDAD NACIONAL DEL SUR   (Argentina)

Author keywords

Conservation; genetic variability; Helianthus annuus; microsatellites; naturalised population

Indexed keywords

CONSERVATION GENETICS; DICOTYLEDON; DIVERGENCE; GENETIC MARKER; GENETIC VARIATION; INVASIVE SPECIES; MOLECULAR ANALYSIS; NATURALIZATION; PLANT BREEDING; SAMPLING; SPECIES CONSERVATION; SPECIES DIVERSITY; VARIANCE ANALYSIS; WILD POPULATION;

ARGENTINA;

HELIANTHUS; HELIANTHUS ANNUUS;

EID: 79954865488     PISSN: 00034746     EISSN: 17447348     Source Type: Journal    
DOI: 10.1111/j.1744-7348.2011.00465.x     Document Type: Article

References (72)

1. Anfinrud M.N., (1997) Planting hybrid seed production and seed quality evaluation. In Sunflower Technology and Production, pp. 697-708. Ed, A.A. Schneiter,. Madison, WI, USA: American Society of Agronomy.
2. Archibald J.K., Crawford D.J., Santos-Guerra A., Mort M.E., (2006) The utility of automated analysis of inter-simple sequence repeat (ISSR) loci for resolving relationships in the Canary Island species of Tolpis (Asteraceae). American Journal of Botany, 93, 1154-1162. (Pubitemid 44338211)
3. ASAGIR (2002) Asociación Argentina de Girasol. Simposio Argentino de girasol. C. Casares, 29 de agosto de 2002. URL www.asagir.org.ar/asagir2008/ simposio/clearfield%2012.doc
4. Baack E.J., Sapir Y., Chapman M.A., Burke J.M., Rieseberg L.H., (2008) Selection on domestication traits and quantitative trait loci in crop-wild sunflower hybrids. Molecular Ecology, 17, 666-677.
5. Barrett S.C.H., Husband B.C., (1990) Genetics of plant migration and colonization. In Plant Population Genetics, Breeding and Genetic Resources, pp. 254-277. Eds, A.H.D. Brown, M.T. Clegg, A.L. Kahler, and, B.S. Weir,. Sunderland, MA, USA: Sinauer Associates, Inc.
6. Bauer H.A., (1991) Cuarenta años en el mejoramiento del girasol (Helianthus annuus L.) en Argentina 1947-1987. Helia, 14, 63-68.
7. Bossdorf O., Auge H., Lafuma L., Rogers W.E., Siemann E., Prati D., (2005) Phenotypic and genetic differentiation between native and introduced plant populations. Oecologia, 144, 1-11. (Pubitemid 41175367)
8. Brown A.H.D., Briggs J.D., (1991) Sampling strategies for genetic variation in ex situ collections of endangered plant species. In Genetics and Conservation of Rare Plants, pp. 99-122. Eds, D.A. Falk, and, K.E. Holsinger,. New York, USA: Oxford University Press.
9. Burke J.M., Gardner K.A., Rieseberg L.H., (2002) The potential for gene flow between cultivated and wild sunflower (Helianthus annuus) in the United States. American Journal of Botany, 89, 1550-1552.
10. Burke J.M., Knapp S.J., Rieseberg L.H., (2005) Genetic consequences of selection during the evolution of cultivated sunflower. Genetics, 171, 1933-1940.
11. Cabrera A.L., (1971) Fitogeografía de la República Argentina. Boletín de la Sociedad Argentina de Botánica, 14, 1-42.
12. Cabrera A.L., (1974) Compositae. In Flora Ilustrada de Entre Ríos (Argentina), Parte VI. Ed, A. Burkart,. Buenos Aires, Argentina: Colección Científica del INTA.
13. Cantamutto M., Poverene M., Peinemann N., (2008) Multi-scale analysis of two annual Helianthus species naturalization in Argentina. Agriculture, Ecosystems and Environment, 123, 69-74. (Pubitemid 47599680)
14. Cantamutto M., Presotto A., Fernandez Moroni I., Alvarez D., Poverene M., Seiler G., (2010) High infraspecific diversity of wild sunflowers (Helianthus annuus L.) naturally developed in central Argentina. Flora-Morphology, Distribution, Functional Ecology of Plants, 205, 306-312.
15. Chapman H.M., Parh D., Oraguzie N., (2000) Genetic structure and colonizing success of a clonal, weedy species, Pilosella officinarum (Asteraceae). Heredity, 84, 401-409. (Pubitemid 30400026)
16. Darvishzadeh R., Poormohammad Kiani S., Dechamp-Guillaume G., Gentzbittel L., Sarrafi A., (2007) Quantitative trait loci associated with isolate specific and isolate nonspecific partial resistance to Phoma macdonaldii in sunflower. Plant Pathology, 56, 855-861. (Pubitemid 47389971)
17. De la Vega A.J., De Lacy I.H., Chapman S.C., (2007) Progress over 20 years of sunflower breeding in central Argentina. Field Crops Research, 100, 61-72. (Pubitemid 44550247)
18. Di Rienzo J.A., Casanoves F., Balzarini M.G., Gonzalez L., Tablada M., Robledo C.W., (2008) InfoStat, Versión 2008. Grupo InfoStat, FCA, Universidad Nacional de Córdoba, Argentina. URL.
19. Dry P.J., Burdon J.J., (1986) Genetic structure of natural populations of wild sunflowers (Helianthus annuus L.) in Australia. Australian Journal of Biological Science, 39, 255-270.
20. Ellis J.R., Pashley C.H., Burke J.M., McCauley D.E., (2006) High genetic diversity in a rare and endangered sunflower as compared to a common congener. Molecular Ecology, 15, 2345-2355. (Pubitemid 44050707)
21. Ellstrand N.C., (2003) Dangerous Liaisons? When Cultivated Plants Mate with their Wild Relatives. Baltimore and London: The John Hopkins University Press.
22. Excoffier L., Smouse P.E., Quattro J.M., (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479-491.
23. Fusari C.M., Lia V.V., Hopp H.E., Heinz R.A., Paniego N.B., (2008) Identification of single nucleotide polymorphisms and analysis of linkage disequilibrium in sunflower elite inbred lines using the candidate gene approach. BMC Plant Biology, 8, 7.
24. Gupta M., Chyi Y.-S., Romero-Severson J., Owen J.L., (1994) Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple-sequence repeats. Theoretical and Applied Genetics, 89, 998-1006.
25. Gutierrez A., Carrera A., Basualdo J., Rodríguez R., Cantamutto M., Poverene M., (2010) Gene flow between cultivated sunflower and Helianthus petiolaris (Asteraceae). Euphytica, 172, 67-76.
26. Hamrick J.L., Godt M.J.W., (1989) Allozyme diversity in plant species. In Plant Population Genetics, Breeding and Genetic Resources, pp. 43-63. Eds, A.H.D. Brown, M.T. Clegg, A.L. Kahler, and, B.S. Weir,. Sunderland, MA, USA: Sinauer Associates.
27. Hartl D.L., Clark A.G., (1997) Principles of Population Genetics. 3rd edn. Sunderland: Sinauer Associates, Inc.
28. Heesacker A., Kishore V.A., Gao W., Tang S., Kolkman J.M., Gingle A., Matvienko M., Kozik A., Michelmore R.M., Lai Z., Rieseberg L.H., Knapp S.J., (2008) SSRs and INDELs mined from the sunflower EST database: abundance, polymorphisms, and cross-taxa utility. Theoretical and Applied Genetics, 117, 1021-1029.
29. Heiser C.B., Smith D.M., Clegenger S., Martin W.C., (1969) The North American sunflowers (Helianthus). Memoirs of the Torrey Botanical Club, 22, 1-218.
30. Hoisington D., Khairallah M., González de León D., (1994) Laboratory Protocols: CIMMYT Applied Molecular Genetics Laboratory. 2nd edn. México, DF, Mexico: CIMMYT.
31. Huff D.R., Peakall R., Smouse P.E., (1993) RAPD variation within and among natural populations of outcrossing buffalograss [Buchloà dactyloides (Nutt.) Engelm]. Theoretical and Applied Genetics, 86, 927-934.
32. Jan C.C., Seiler G.J., (2007) Sunflower. In Genetic Resources, Chromosome Engineering, and Crop Improvement: Oilseed Crops. Volume 4, pp. 103-165. Ed, R.J. Singh,. New York: CRC Press, Taylor and Francis Group.
33. Kane N.C., Rieseberg L.H., (2008) Genetics and evolution of weedy Helianthus annuus populations: adaptation of an agricultural weed. Molecular Ecology, 17, 384-394. (Pubitemid 350292465)
34. Kane N.C., King M., Barker M.S., Raduski A., Karrenberg S., Yatabe Y., Knapp S.J., Rieseberg L.H., (2009) Comparative genomic and population genetic analyses indicate highly porous genomes and high levels of gene flow between divergent Helianthus species. Evolution, 63, 2061-2075.
35. Keeler K.H., (1989) Can genetically engineered crops become weeds? Biotechnology, 7, 1134-1139.
36. Knapp E.E., Rice K.J., (1998) Comparison of isozymes and quantitative traits for evaluating patters of genetic variation in purple needlegrass (Nassella pulchra). Conservation Biology, 12, 1031-1041. (Pubitemid 28478433)
37. Leclercq P., (1969) Cytoplasmic male sterility in sunflower. Annales de L'Amelioration de Plantes, 19, 99-106.
38. Litt M., Luty J.A., (1989) A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. American Journal of Human Genetics, 44, 398-401.
39. Lynch M., Milligan B.G., (1994) Analysis of population genetic structure with RAPD markers. Molecular Ecology, 3, 91-99. (Pubitemid 2073764)
40. Maguire T.L., Peakall R., Saenger P., (2002) Comparative analysis of genetic diversity in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicenniaceae) detected by AFLPs and SSRs. Theoretical and Applied Genetics, 104, 388-398. (Pubitemid 36065067)
41. Mantel N.A., (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209-220.
42. Marshall D.R., Brown A.H.D., (1975) Optimum sampling strategies in genetic conservation. In Crop Genetic Resources for Today and Tomorrow. pp. 53-80. Eds, O.H. Frankel, and, J.G. Hawkes,. London, UK: Cambridge University Press.
43. Miller J.F., Al-Khatib K., (2004) Registration of two oilseed sunflower genetic stocks, SURES-1 and SURES-2, resistant to tribenuron herbicide. Crop Science, 44, 1037-1038.
44. Miller J.F., Gulya T.J., (1999) Registration of eight Sclerotinia-tolerant sunflower germplasm lines. Crop Science, 39, 301-302.
45. Miller J.F., Seiler G.J., (2003) Registration of five oilseed maintainer (HA 429-HA 433) sunflower germplasm lines. Crop Science, 43, 2313-2314.
46. Mohsen H., Ali F., (2008) Study of genetic polymorphism of Artemisia herba-alba from Tunisia using ISSR markers. African Journal of Biotechnology, 7, 44-50.
47. Mokrani L., Gentzbittel L., Azanza F., Fitamant L., Al-Chaarani G., Sarrafi A., (2002) Mapping and analysis of quantitative trait loci for grain oil content and agronomic traits using AFLP and SSR in sunflower (Helianthus annuus L.). Theoretical and Applied Genetics, 106, 149-156. (Pubitemid 36599700)
48. Muller M.H., Arlie G., Bervillé A., David J., Delieux F., Fernandez-Martinez J.M., Jouffret P., Lecomte V., Reboud X., Rousselle Y., Serieys H., Teissere N., Tsitrone A., (2006) Le compartiment spontané du tournesol Helianthus annuus en Europe: prospections et premières caractérisations génétiques. Les Actes du BRG, 6, 335-353.
49. Muller M.E., Délieux F., Fernández Martínez J.M., Garric B., Lecomte V., Anglade G., Leflon M., Motard C., Segura R., (2009) Occurrence, distribution and distinctive morphological traits of weedy Helianthus annuus L. populations in Spain and France. Genetics and Resources in Crop Evolution, 56, 869-877.
50. Paniego N., Echaide M., Muñoz M., Fernández L., Torales S., Faccio P., Fuxan I., Carrera M., Zandomeni R., Suárez E.Y., Hopp H.E., (2002) Microsatellite isolation and characterization in sunflower (Helianthus annuus L.). Genome, 45, 34-43. DOI: 10.1139/G01-120. (Pubitemid 34190669)
51. Peakall R., Smouse P.E., Huff D.R., (1995) Evolutionary implications of allozyme and RAPD variation in diploid populations of buffalograss Buchloà dactyloides. (Nutt. Engelm.). Molecular Ecology, 4, 135-147.
52. Peakall R., Smouse P.E., (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes, 6, 288-295. (Pubitemid 43373825)
53. Poverene M.M., Cantamutto M.A., Carrera A.D., Ureta M.S., Salaberry M.T., Echeverria M.M., Rodriguez R.H., (2002) El girasol silvestre (Helianthus spp.) en la Argentina: caracterización para la liberación de cultivares transgénicos. Revista de Investigaciones Agropecuarias RIA, 31, 97-116.
54. Poverene M., Carrera A., Ureta S., Cantamutto M., (2004) Wild Helianthus species and wild-sunflower hybridization in Argentina. Helia, 27, 133-142.
55. Poverene M., Cantamutto M., Seiler G.J., (2008) Ecological characterization of wild Helianthus annuus and H. petiolaris germplasm in Argentina. Plant Genetic Resources Characterization and Utilization (UK), 7, 42-49.
56. Powell W., Morgante M., Andre C., Hanafey M., Vogel J., Tingey S., Rafalski A., (1996) The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Molecular Breeding, 2, 225-238. (Pubitemid 126706643)
57. Reagon M., Snow A.A., (2006) Cultivated Helianthus annuus (Asteraceae) volunteers as a genetic 'bridge' to weedy sunflower populations in North America. American Journal of Botany, 93, 127-133. (Pubitemid 43187879)
58. Rieseberg L.H., Seiler G.J., (1990) Molecular evidence and the origin and development of the domesticated sunflower (Helianthus annuus, Asteraceae.). Economic Botany, 44, 79-91.
59. Rogers C.E., Thompson T.E., Seiler G.J., (1982) Sunflower Species of the United States. Fago, ND, USA: National Sunflower Association.
60. Slotta T.A.B., Horvath D.P., Foley M.E., (2005) Development of polymorphic markers for Cirsium arvense, Canada thistle, and their amplification in closely related taxa. Molecular Ecology Notes, 5, 917-919. (Pubitemid 43278011)
61. Smouse P.E., Long J.C., Sokal R.R., (1986) Multiple regression and correlation extensions of the Mantel test of matrix correspondence. Systematic Zoology, 35, 627-632.
62. Smouse P.E., Peakall R., (1999) Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure. Heredity, 82, 561-573. (Pubitemid 29285226)
63. Snow A.A., Pilson D., Rieseberg L.H., Paulsen M.J., Pleskac N., Reagon M.R., Wolf D.E., Selbo S.M., (2003) A Bt transgene reduces herbivory and enhances fecundity in wild sunflowers. Ecological Applications, 13, 279-286. (Pubitemid 36872841)
64. Tang S., Kishore V.K., Knapp S.J., (2003) PCR-multiplexes for a genome-wide framework of simple sequence repeat marker loci in cultivated sunflower. Theoretical and Applied Genetics, 107, 6-19. (Pubitemid 36803486)
65. Tang S., Knapp S.J., (2003) Microsatellites uncover extraordinary diversity in Native American land races and wild populations of cultivated sunflower. Theoretical and Applied Genetics, 106, 990-1003. (Pubitemid 36599807)
66. Ureta M.S., Carrera A., Cantamutto M.A., Poverene M.M., (2008a) Gene flow among wild and cultivated sunflower, Helianthus annuus in Argentina. Agriculture, Ecosystems and Environment, 123, 343-349. (Pubitemid 350087261)
67. Ureta S., Cantamutto M., Carrera A., Delucchi C., Poverene M., (2008b) Natural hybrids between wild and cultivated sunflower. Genetic Resources in Crop Evolution, 55, 1267-1277.
68. Wang T., Su Y., Chen G., (2008) Population genetic variation and structure of the invasive weed Mikania micrantha in Southern China: consequences of rapid range expansion. Journal of Heredity, 99, 22-33. (Pubitemid 351261482)
69. Wolfe A.D., Xiang Q.-Y., Kephart S.R., (1998) Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable inter simple sequence repeat markers. Molecular Ecology, 7, 1107-1125. (Pubitemid 28428489)
70. Yatabe Y., Kane N.C., Scotti-Saintagne C., Rieseberg L.H., (2007) Rampant gene exchange across a strong reproductive barrier between the annual sunflowers, Helianthus annuus and H. petiolaris. Genetics, 175, 1883-1893. (Pubitemid 46789970)
71. Zietkiewicz E., Rafalski A., Labuda D., (1994) Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics, 20, 176-183. (Pubitemid 24108394)
72. Zuloaga F., Morrone O., (1999) Catálogo de las plantas vasculares de la Argentina. Monographs in Systematic Botany. St. Louis, MO, USA: Missouri Botanical Gardens. URL