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Volumn 3, Issue 2, 2011, Pages 223-232

Humpback whales harbour a combination of specific and variable skin bacteria

Author keywords

[No Author keywords available]

Indexed keywords

ANIMALIA; BACTERIA (MICROORGANISMS); BACTEROIDETES; BACTEROIDETES PHYLUM; CETACEA; FLAVOBACTERIACEAE; MAMMALIA; MEGAPTERA; MEGAPTERA NOVAEANGLIAE; TENACIBACULUM;

EID: 79954588638     PISSN: None     EISSN: 17582229     Source Type: Journal    
DOI: 10.1111/j.1758-2229.2010.00213.x     Document Type: Article
Times cited : (42)

References (56)
  • 2
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R., Ludwig, W., and Schleifer, K. (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59: 143-169.
    • (1995) Microbiol Rev , vol.59 , pp. 143-169
    • Amann, R.1    Ludwig, W.2    Schleifer, K.3
  • 3
    • 0025198765 scopus 로고
    • Influence of seasonal migration on geographic distribution of mitochondrial DNA haplotypes in humpback whales
    • Baker, C.S., Palumbi, S.R., Lambertsen, R.H., Weinrich, M.T., Calambokidis, J., and O'Brien, S.J. (1990) Influence of seasonal migration on geographic distribution of mitochondrial DNA haplotypes in humpback whales. Nature 344: 238-240.
    • (1990) Nature , vol.344 , pp. 238-240
    • Baker, C.S.1    Palumbi, S.R.2    Lambertsen, R.H.3    Weinrich, M.T.4    Calambokidis, J.5    O'Brien, S.J.6
  • 5
    • 77954419671 scopus 로고    scopus 로고
    • Novel strains isolated from a coastal aquifer suggest a predatory role for Flavobacteria
    • Banning, E., Casciotti, K., and Kujawinski, E. (2010) Novel strains isolated from a coastal aquifer suggest a predatory role for Flavobacteria. FEMS Microbiol Ecol 73: 254-270.
    • (2010) FEMS Microbiol Ecol , vol.73 , pp. 254-270
    • Banning, E.1    Casciotti, K.2    Kujawinski, E.3
  • 6
    • 0035210037 scopus 로고    scopus 로고
    • Phylogenetic characterization of epibiotic bacteria in the accessory nidamental gland and egg capsules of the squid Loligo pealei (Cephalopoda: Loliginidae)
    • Barbieri, E., Paster, B.J., Hughes, D., Zurek, L., Moser, D.P., Teske, A., and Sogin, M.L. (2001) Phylogenetic characterization of epibiotic bacteria in the accessory nidamental gland and egg capsules of the squid Loligo pealei (Cephalopoda: Loliginidae). Environ Microbiol 3: 151-167.
    • (2001) Environ Microbiol , vol.3 , pp. 151-167
    • Barbieri, E.1    Paster, B.J.2    Hughes, D.3    Zurek, L.4    Moser, D.P.5    Teske, A.6    Sogin, M.L.7
  • 7
    • 64849112320 scopus 로고    scopus 로고
    • Skin lesions and physical deformities of coastal and offshore common bottlenose dolphins (Tursiops truncatus) in Santa Monica Bay and adjacent areas, California
    • Bearzi, M., Rapoport, S., Chau, J., and Saylan, C. (2009) Skin lesions and physical deformities of coastal and offshore common bottlenose dolphins (Tursiops truncatus) in Santa Monica Bay and adjacent areas, California. Ambio 38: 66-71.
    • (2009) Ambio , vol.38 , pp. 66-71
    • Bearzi, M.1    Rapoport, S.2    Chau, J.3    Saylan, C.4
  • 8
    • 67649471558 scopus 로고    scopus 로고
    • Cultivating microorganisms from dilute aquatic environments: melding traditional methodology with new cultivation techniques and molecular methods
    • Hurst, C.J., Crawford, R.L., Knudsen, G.R., McInerney, M.J., and Stetzenbach, L.D. (eds). Washington, DC, USA: ASM Press
    • Becker, J.W., Brandon, M.L., and Rappé, M.S. (2007) Cultivating microorganisms from dilute aquatic environments: melding traditional methodology with new cultivation techniques and molecular methods. In Manual of Environmental Microbiology. Hurst, C.J., Crawford, R.L., Knudsen, G.R., McInerney, M.J., and Stetzenbach, L.D. (eds). Washington, DC, USA: ASM Press, pp. 399-406.
    • (2007) Manual of Environmental Microbiology , pp. 399-406
    • Becker, J.W.1    Brandon, M.L.2    Rappé, M.S.3
  • 9
    • 0035989410 scopus 로고    scopus 로고
    • Pasteurella skyensis sp. nov., isolated from Atlantic salmon (Salmo salar L.)
    • Birkbeck, T.H., Laidler, L.A., Grant, A.N., and Cox, D.I. (2002) Pasteurella skyensis sp. nov., isolated from Atlantic salmon (Salmo salar L.). Int J Syst Evol Microbiol 52: 699-704.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 699-704
    • Birkbeck, T.H.1    Laidler, L.A.2    Grant, A.N.3    Cox, D.I.4
  • 10
    • 0026272811 scopus 로고
    • Bacteria associated with stranded cetaceans from the northeast USA and southwest Florida Gulf coasts
    • Buck, J.D., Overstrom, N.A., Patton, G.W., Anderson, H.F., and Gorzelany, J.F. (1991) Bacteria associated with stranded cetaceans from the northeast USA and southwest Florida Gulf coasts. Dis Aquat Organ 10: 147-152.
    • (1991) Dis Aquat Organ , vol.10 , pp. 147-152
    • Buck, J.D.1    Overstrom, N.A.2    Patton, G.W.3    Anderson, H.F.4    Gorzelany, J.F.5
  • 11
    • 0025350606 scopus 로고
    • Bacterial flora of fishes: a review
    • Cahill, M.M. (1990) Bacterial flora of fishes: a review. Microb Ecol 19: 21-41.
    • (1990) Microb Ecol , vol.19 , pp. 21-41
    • Cahill, M.M.1
  • 14
    • 0029667233 scopus 로고    scopus 로고
    • The social reproductive biology of humpback whales: an ecological perspective
    • Clapham, P.J. (1996) The social reproductive biology of humpback whales: an ecological perspective. Mammal Rev 26: 27-49.
    • (1996) Mammal Rev , vol.26 , pp. 27-49
    • Clapham, P.J.1
  • 15
    • 13444304367 scopus 로고    scopus 로고
    • The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
    • Cole, J.R., Chai, B., Farris, R.J., Wang, Q., Kulam, S.A., McGarrell, D.M., etal. (2005) The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Res 33: 294-296.
    • (2005) Nucleic Acids Res , vol.33 , pp. 294-296
    • Cole, J.R.1    Chai, B.2    Farris, R.J.3    Wang, Q.4    Kulam, S.A.5    McGarrell, D.M.6
  • 16
    • 72949091232 scopus 로고    scopus 로고
    • Bacterial community variation in human body habitats across space and time
    • Costello, E.K., Lauber, C.L., Hamady, M., Fierer, N., Gordon, J.I., and Knight, R. (2009) Bacterial community variation in human body habitats across space and time. Science 326: 1694-1697.
    • (2009) Science , vol.326 , pp. 1694-1697
    • Costello, E.K.1    Lauber, C.L.2    Hamady, M.3    Fierer, N.4    Gordon, J.I.5    Knight, R.6
  • 17
    • 56649124715 scopus 로고    scopus 로고
    • The influence of sex, handedness, and washing on the diversity of hand surface bacteria
    • Fierer, N., Hamady, M., Lauber, C.L., and Knight, R. (2008) The influence of sex, handedness, and washing on the diversity of hand surface bacteria. Proc Natl Acad Sci USA 105: 17994-17999.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 17994-17999
    • Fierer, N.1    Hamady, M.2    Lauber, C.L.3    Knight, R.4
  • 19
    • 1842527036 scopus 로고    scopus 로고
    • Tenacibaculum skagerrakense sp. nov., a marine bacterium isolated from the pelagic zone in Skagerrak, Denmark
    • Frette, L., Jorgensen, N.O.G., Irming, H., and Kroer, N. (2004) Tenacibaculum skagerrakense sp. nov., a marine bacterium isolated from the pelagic zone in Skagerrak, Denmark. Int J Syst Evol Microbiol 54: 519-524.
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 519-524
    • Frette, L.1    Jorgensen, N.O.G.2    Irming, H.3    Kroer, N.4
  • 20
    • 50549099726 scopus 로고    scopus 로고
    • Substantial alterations of the cutaneous bacterial biota in psoriatic lesions
    • Gao, Z., Tseng, C.-h., Strober, B.E., Pei, Z., and Blaser, M.J. (2008) Substantial alterations of the cutaneous bacterial biota in psoriatic lesions. PLoS ONE 3: e2719.
    • (2008) PLoS ONE , vol.3
    • Gao, Z.1    Tseng, C.-H.2    Strober, B.E.3    Pei, Z.4    Blaser, M.J.5
  • 21
    • 0000262823 scopus 로고    scopus 로고
    • Evolution, diversity, and molecular ecology of marine prokaryotes
    • Kirchman, D.L. (ed.). New York, NY, USA: Wiley-Liss
    • Giovannoni, S.J., and Rappé, M.S. (2000) Evolution, diversity, and molecular ecology of marine prokaryotes. In Microbial Ecology of the Oceans. Kirchman, D.L. (ed.). New York, NY, USA: Wiley-Liss, pp. 47-84.
    • (2000) Microbial Ecology of the Oceans , pp. 47-84
    • Giovannoni, S.J.1    Rappé, M.S.2
  • 22
    • 66349083859 scopus 로고    scopus 로고
    • Topographical and temporal diversity of the human skin microbiome
    • Grice, E.A., Kong, H.H., Conlan, S., Deming, C.B., Davis, J., Young, A.C., etal. (2009) Topographical and temporal diversity of the human skin microbiome. Science 324: 1190-1192.
    • (2009) Science , vol.324 , pp. 1190-1192
    • Grice, E.A.1    Kong, H.H.2    Conlan, S.3    Deming, C.B.4    Davis, J.5    Young, A.C.6
  • 23
    • 31544474021 scopus 로고    scopus 로고
    • Skin lesions on North Atlantic right whales: categories, prevalence and change in occurrence in the 1990s
    • Hamilton, P.K., and Marx, M.K. (2005) Skin lesions on North Atlantic right whales: categories, prevalence and change in occurrence in the 1990s. Dis Aquat Organ 68: 71-82.
    • (2005) Dis Aquat Organ , vol.68 , pp. 71-82
    • Hamilton, P.K.1    Marx, M.K.2
  • 25
    • 44449137672 scopus 로고    scopus 로고
    • Tenacibaculum adriaticum sp. nov., from a bryozoan in the Adriatic Sea
    • Heindl, H., Wiese, J., and Imhoff, J.F. (2008) Tenacibaculum adriaticum sp. nov., from a bryozoan in the Adriatic Sea. Int J Syst Evol Microbiol 58: 542-547.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 542-547
    • Heindl, H.1    Wiese, J.2    Imhoff, J.F.3
  • 26
    • 78649726417 scopus 로고    scopus 로고
    • Novel diversity of bacterial communities associated with bottlenose dolphin upper respiratory tracts
    • Johnson, W.R., Torralba, M., Fair, P.A., Bossart, G.D., Nelson, K.E., and Morris, P.J. (2009) Novel diversity of bacterial communities associated with bottlenose dolphin upper respiratory tracts. Environ Microbiol Rep 1: 555-562.
    • (2009) Environ Microbiol Rep , vol.1 , pp. 555-562
    • Johnson, W.R.1    Torralba, M.2    Fair, P.A.3    Bossart, G.D.4    Nelson, K.E.5    Morris, P.J.6
  • 27
    • 33746265921 scopus 로고    scopus 로고
    • Tenacibaculum aestuarii sp. nov., isolated from a tidal flat sediment in Korea
    • Jung, S.-Y., Oh, T.-K., and Yoon, J.-H. (2006) Tenacibaculum aestuarii sp. nov., isolated from a tidal flat sediment in Korea. Int J Syst Evol Microbiol 56: 1577-1581.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 1577-1581
    • Jung, S.-Y.1    Oh, T.-K.2    Yoon, J.-H.3
  • 28
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Stackebrandt, E., and Goodfellow, M. (eds). Chichester, UK: John Wiley & Sons
    • Lane, D.J. (1991) 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics. Stackebrandt, E., and Goodfellow, M. (eds). Chichester, UK: John Wiley & Sons, pp. 115-175.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 30
    • 33845873289 scopus 로고    scopus 로고
    • Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
    • Letunic, I., and Bork, P. (2006) Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics 23: 127-128.
    • (2006) Bioinformatics , vol.23 , pp. 127-128
    • Letunic, I.1    Bork, P.2
  • 32
    • 0030661563 scopus 로고    scopus 로고
    • Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA
    • Liu, W.T., Marsh, T.L., Cheng, H., and Forney, L.J. (1997) Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl Environ Microbiol 63: 4516-4522.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4516-4522
    • Liu, W.T.1    Marsh, T.L.2    Cheng, H.3    Forney, L.J.4
  • 34
    • 79954587014 scopus 로고    scopus 로고
    • Cetacean surveys in the Cape Verde Islands and the use of cookie-cutter shark bite lesions as a population marker for fin whales
    • Moore, M., Steiner, L., and Jann, B. (2003) Cetacean surveys in the Cape Verde Islands and the use of cookie-cutter shark bite lesions as a population marker for fin whales. Aquatic Mammals 29: 383-389.
    • (2003) Aquatic Mammals , vol.29 , pp. 383-389
    • Moore, M.1    Steiner, L.2    Jann, B.3
  • 35
    • 0031961966 scopus 로고    scopus 로고
    • A heavily parasitized humpback whale (Megaptera novaeangliae)
    • Osmond, M.G., and Kaufman, G.D. (1998) A heavily parasitized humpback whale (Megaptera novaeangliae). Mar Mamm Sci 14: 146-149.
    • (1998) Mar Mamm Sci , vol.14 , pp. 146-149
    • Osmond, M.G.1    Kaufman, G.D.2
  • 36
    • 0002975912 scopus 로고
    • Sampling of skin biopsies from free-ranging large cetaceans in West Greenland: development of new biopsy tips and bolt designs
    • Palsbøll, P., Larsen, F., and Hansen, E. (1991) Sampling of skin biopsies from free-ranging large cetaceans in West Greenland: development of new biopsy tips and bolt designs. Rep Int Whaling Comm 13: 71-79.
    • (1991) Rep Int Whaling Comm , vol.13 , pp. 71-79
    • Palsbøll, P.1    Larsen, F.2    Hansen, E.3
  • 37
    • 40449094874 scopus 로고    scopus 로고
    • Tenacibaculum discolor sp. nov. and Tenacibaculum gallaicum sp. nov., isolated from sole (Solea senegalensis) and turbot (Psetta maxima) culture systems
    • Pineiro-Vidal, M., Riaza, A., and Santos, Y. (2008a) Tenacibaculum discolor sp. nov. and Tenacibaculum gallaicum sp. nov., isolated from sole (Solea senegalensis) and turbot (Psetta maxima) culture systems. Int J Syst Evol Microbiol 58: 21-25.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 21-25
    • Pineiro-Vidal, M.1    Riaza, A.2    Santos, Y.3
  • 39
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse, E., Quast, C., Knittel, K., Fuchs, B., Ludwig, W., Peplies, J., and Glöckner, F.O. (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196.
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.4    Ludwig, W.5    Peplies, J.6    Glöckner, F.O.7
  • 40
  • 41
    • 0042878464 scopus 로고    scopus 로고
    • Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation
    • Rocap, G., Larimer, F.W., Lamerdin, J., Malfatti, S., Chain, P., Ahlgren, N.A., etal. (2003) Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. Nature 424: 1042-1047.
    • (2003) Nature , vol.424 , pp. 1042-1047
    • Rocap, G.1    Larimer, F.W.2    Lamerdin, J.3    Malfatti, S.4    Chain, P.5    Ahlgren, N.A.6
  • 42
    • 0034890481 scopus 로고    scopus 로고
    • Diversity of bacteria associated with the Caribbean coral Montastraea franksi
    • Rohwer, F., Breitbart, M., Jara, J., Azam, F., and Knowlton, N. (2001) Diversity of bacteria associated with the Caribbean coral Montastraea franksi. Coral Reefs 20: 85-95.
    • (2001) Coral Reefs , vol.20 , pp. 85-95
    • Rohwer, F.1    Breitbart, M.2    Jara, J.3    Azam, F.4    Knowlton, N.5
  • 43
    • 0041888806 scopus 로고
    • Cyamids: the louse that moored
    • Roundtree, V.J. (1983) Cyamids: the louse that moored. J Am Cetacean Soc 17: 14-17.
    • (1983) J Am Cetacean Soc , vol.17 , pp. 14-17
    • Roundtree, V.J.1
  • 44
    • 0029668453 scopus 로고    scopus 로고
    • Feeding, distribution, and reproductive behavior of cyamids (Crustacea: Amphipoda) living on humpback and right whales
    • Roundtree, V.J. (1996) Feeding, distribution, and reproductive behavior of cyamids (Crustacea: Amphipoda) living on humpback and right whales. Can J Zool 74: 103-109.
    • (1996) Can J Zool , vol.74 , pp. 103-109
    • Roundtree, V.J.1
  • 45
    • 33947238287 scopus 로고    scopus 로고
    • The Sorcerer II global ocean sampling expedition: Northwest Atlantic through Eastern Tropical Pacific
    • Rusch, D.B., Halpern, A.L., Sutton, G., Heidelberg, K.B., Williamson, S., Yooseph, S., etal. (2007) The Sorcerer II global ocean sampling expedition: Northwest Atlantic through Eastern Tropical Pacific. PLoS Biol 5: e77.
    • (2007) PLoS Biol , vol.5
    • Rusch, D.B.1    Halpern, A.L.2    Sutton, G.3    Heidelberg, K.B.4    Williamson, S.5    Yooseph, S.6
  • 46
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 48
    • 0036566806 scopus 로고    scopus 로고
    • Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by 'reconditioning PCR
    • Thompson, J.R., Marcelino, L.A., and Polz, M.F. (2002) Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by 'reconditioning PCR. Nucleic Acids Res 30: 2083-2088.
    • (2002) Nucleic Acids Res , vol.30 , pp. 2083-2088
    • Thompson, J.R.1    Marcelino, L.A.2    Polz, M.F.3
  • 51
  • 52
    • 0035344779 scopus 로고    scopus 로고
    • Streamlined method to analyze 16S rRNA gene clone libraries
    • Vergin, K.L., Rappe, M.S., and Giovannoni, S.J. (2001) Streamlined method to analyze 16S rRNA gene clone libraries. Biotechniques 30: 938-944.
    • (2001) Biotechniques , vol.30 , pp. 938-944
    • Vergin, K.L.1    Rappe, M.S.2    Giovannoni, S.J.3
  • 53
    • 34548293679 scopus 로고    scopus 로고
    • Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • Wang, Q., Garrity, G.M., Tiedje, J.M., and Cole, J.R. (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73: 5261-5267.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 54
    • 47249091340 scopus 로고    scopus 로고
    • Tenacibaculum aiptasiae sp. nov., isolated from a sea anemone Aiptasia pulchella
    • Wang, J.-T., Chou, Y.-J., Chou, J.-H., Chen, C.A., and Chen, W.-M. (2008) Tenacibaculum aiptasiae sp. nov., isolated from a sea anemone Aiptasia pulchella. Int J Syst Evol Microbiol 58: 761-766.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 761-766
    • Wang, J.-T.1    Chou, Y.-J.2    Chou, J.-H.3    Chen, C.A.4    Chen, W.-M.5
  • 55
    • 52149085893 scopus 로고    scopus 로고
    • The All-Species Living Tree Project: a 16S rRNA-based phylogenetic tree of all sequenced type strains
    • Yarza, P., Richter, M., Peplies, J., Euzeby, J., Amann, R., Schleifer, K.H., etal. (2008) The All-Species Living Tree Project: a 16S rRNA-based phylogenetic tree of all sequenced type strains. Syst Appl Microbiol 31: 241-250.
    • (2008) Syst Appl Microbiol , vol.31 , pp. 241-250
    • Yarza, P.1    Richter, M.2    Peplies, J.3    Euzeby, J.4    Amann, R.5    Schleifer, K.H.6
  • 56
    • 16844365760 scopus 로고    scopus 로고
    • Tenacibaculum lutimaris sp., nov., isolated from a tidal flat in the Yellow Sea, Korea
    • Yoon, J.-H., Kang, S.-J., and Oh, T.-K. (2005) Tenacibaculum lutimaris sp., nov., isolated from a tidal flat in the Yellow Sea, Korea. Int J Syst Evol Microbiol 55: 793-798.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 793-798
    • Yoon, J.-H.1    Kang, S.-J.2    Oh, T.-K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.