libfbi: A C++ implementation for fast box intersection and application to sparse mass spectrometry data

Bioinformatics

Volumn 27, Issue 8, 2011, Pages 1166-1167

  Kirchner, Marc ^a,b   Xu, Buote ^a   Steen, Hanno ^a,b   Steen, Judith A J ^a  

^a BOSTON CHILDREN S HOSPITAL   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; COMPUTER PROGRAM; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METHODOLOGY;

ALGORITHMS; CHROMATOGRAPHY, LIQUID; MASS SPECTROMETRY; SOFTWARE;

EID: 79954539505     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr084     Document Type: Article

References (3)

1. Cox,J. and Mann,M. (2008) Maxquant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat. Biotechnol., 26, 1367-1372.
2. Khan,Z. et al. (2009) Protein quantification across hundreds of experimental conditions. Proc. Natl Acad. Sci. USA, 106, 15544-15548.
3. Zomorodian,A. and Edelsbrunner,H. (2000) Fast software for box intersections. In SCG '00: Proceedings of the sixteenth annual symposium on Computational geometry, ACM, New York, NY, USA, pp. 129-138.