Mass spectrum patterns of 18O-tagged peptides labeled by enzyme-catalyzed oxygen exchange

Analytical Chemistry

Volumn 83, Issue 8, 2011, Pages 2890-2896

  Fernandez De Cossio, Jorge ^a  

^a CENTER FOR GENETIC ENGINEERING AND BIOTECHNOLOGY   (Cuba)

Author keywords

[No Author keywords available]

Indexed keywords

CARBOXYL TERMINUS; GENERAL MODEL; MASS SPECTRA; O INCORPORATION; OXYGEN EXCHANGE; PROTEIN CHEMISTRY; SHOTGUN PROTEOMICS; SOFTWARE DEVELOPMENT; TIME DEPENDENCY;

CATALYSIS; ENZYMES; MASS SPECTROMETRY; MOLECULAR BIOLOGY; OXYGEN; SOFTWARE DESIGN;

PEPTIDES;

BOVINE SERUM ALBUMIN; MYOGLOBIN; OXYGEN; PEPTIDE; TRYPSIN;

ANIMAL; ARTICLE; BIOCATALYSIS; CATTLE; CHEMISTRY; ELECTROSPRAY MASS SPECTROMETRY; HORSE; ISOTOPE LABELING; KINETICS; METABOLISM; PROTEOMICS;

ANIMALS; BIOCATALYSIS; CATTLE; HORSES; ISOTOPE LABELING; KINETICS; MYOGLOBIN; OXYGEN; OXYGEN ISOTOPES; PEPTIDES; PROTEOMICS; SERUM ALBUMIN, BOVINE; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TRYPSIN;

EID: 79954486675     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac1025368     Document Type: Article

References (24)

1. Desiderio, D.; Kai, M. Biomed. Mass Spectrom. 1983, 10 (8) 471-479
2. Takao, T.; Hori, H.; Okamoto, K.; Harada, A.; Kamachi, M.; Shimonishi, Y. Rapid Commun. Mass Spectrom. 1991, 5 (7) 312-335
3. Gonzalez, J.; Takao, T.; Hori, H.; Besada, V.; Rodriguez, R.; Padron, G.; Shimonishi, Y. Anal. Biochem. 1992, 205, 151-158
4. Rose, K.; Savoy, L.; Simona, M. G.; Offord, R. E.; Wingfied, P. Biochem. J. 1998, 250, 253-259
5. Kuster, B.; Mann, M. Anal. Chem. 1999, 71, 1431-1440
6. Yao, X.; Freas, A.; Ramirez, J.; Demirev, P. A.; Fenselau, C. Anal. Chem. 2001, 73, 2836-2842
7. Back, W. J.; Notenboom, V.; de Koning, L. J.; Muijsers, A. O.; Sixma, T. K.; de Koster, C. G.; de Jong, L. Anal. Chem. 2002, 72, 4417-4422
8. Staes, A.; Demol, H.; Damme, J. V.; Martens, L.; Vandekerckhove, J.; Gevaert, K. J. Proteome Res. 2004, 3, 786-791
9. Sun, G.; Anderson, V. E. Rapid Commun. Mass Spectrom. 2005, 19, 2849-2856
10. El-Shafey, A.; Tolic, N.; Young, M. M.; Sale, K.; Smith, R. D.; Kery, V. Protein Sci. 2006, 15 (3) 429-440
11. Stewart, I. I., Thomson, T., and Figeys, D. Rapid Commun. Mass Spectrom. 2001, 15, 2456-2465
12. Fenselau, C.; Yao, X. J. Proteome Res. 2009, 8 (5) 2140-2143
13. Schnolzer, M.; Jedrzejewski, P.; Lehmann, W. D. Electrophoresis 1996, 17, 945-953
14. Yao, X.; Afonso, C.; Fenselau, C. J. Proteome Res. 2003, 2, 147-152
15. Brown, K.; Fenselau, C. J Proteome Res. 2004, 3 (3) 455-462
16. Mirgorodskaya, O. A.; Kozmin, Y. P.; Titov, M. I.; Korner, R. P.; Sonksen, C.; Roepstorff, P. Rapid Commun. Mass Spectrom. 2000, 14, 1226-1232
17. Eckel-Passow, J. E.; Oberg, A. L.; Therneau, T. M.; Mason, C. J.; Mahoney, D. W.; Johnson, K. L.; Olson, J. E.; Bergen, H. R., III. Bioinformatics 2006, 22, 2739-2745
18. Ramos-Fernandez, A.; Lopez-Ferrer, D.; Vazquez, J. Mol. Cell. Proteomics 2007, 6, 1274-1286
19. Ye, X., Luke, B. T., Johann, D. J., Ono, A., Prieto, D. A., Chan, K. C., Issaq, H. J., Veenstra, T. D., and Blonder, J. Anal. Chem. 2010, 82, 5878-5886
20. Fernandez-de-Cossio, J.; Gonzalez, L. J.; Satomi, Y.; Betancourt, L.; Ramos, T.; Huerta, V.; Besada, V.; Padron, G.; Minamino, N.; Takao, T. Rapid Commun. Mass Spectrom. 2004, 18, 2465-2472
21. Fernandez-de-Cossio, J.; Gonzales, L. J.; Satomi, Y.; Besada, V.; Betancourt, L.; Ramos, Y.; Huerta, V.; Amaro, A.; Besada, V.; Padron, G.; Minamino, N.; Takao, T. Simulator, Matching. http://bioinformatica.cigb.edu.cu/ isotopica/ and http://coco.protein.osaka-u.ac.jp/isotopica/.
22. Johnson, K. L.; Muddiman, D. C. J. Am. Soc. Mass Spectrom. 2004, 15, 437-445
23. Mason, C. J.; Therneau, T. M.; Eckel-Passow, J. E.; Johnson, K. L.; Oberg, A. L.; Olson, J. E.; Nair, K. S.; Muddiman, D. C.; Bergen, H. R., III. Mol. Cell. Proteomics 2007, 6, 305-318
24. Zhu, Q.; Valkenborg, D.; Burzykowski, T. J. Proteome Res. 2010, 9 (5) 2669-2677