I-motif nanospheres: Unusual self-assembly of long cytosine strands

Small

Volumn 7, Issue 8, 2011, Pages 1029-1034

  Zikich, Dragoslav ^a   Liu, Ke ^b   Sagiv, Lior ^b   Porath, Danny ^b   Kotlyar, Alexander ^a  

^a TEL AVIV UNIVERSITY   (Israel)

^b HEBREW UNIVERSITY OF JERUSALEM   (Israel)

Author keywords

atomic force microscopy; DNA; i motifs; nanostructures; self assembly

Indexed keywords

DNA STRUCTURE; ELECTRICAL POLARIZABILITY; ELECTROSTATIC FORCE MICROSCOPY; HEIGHT DISTRIBUTION; I-MOTIF; I-MOTIFS; MILD ACIDIC CONDITIONS; SCANNING TUNNELING MICROSCOPY (STM); TETRAPLEX;

ATOMIC FORCE MICROSCOPY; DNA; ELECTROSTATIC FORCE; NANOSPHERES; NUCLEIC ACIDS; SCANNING TUNNELING MICROSCOPY; SELF ASSEMBLY;

ELECTRIC FORCE MICROSCOPY;

CYTOSINE; NANOSPHERE;

ARTICLE; ATOMIC FORCE MICROSCOPY; CHEMISTRY; CONFORMATION; PH; SCANNING TUNNELING MICROSCOPY; SPECTROSCOPY; STATIC ELECTRICITY; ULTRASTRUCTURE;

CYTOSINE; HYDROGEN-ION CONCENTRATION; MICROSCOPY, ATOMIC FORCE; MICROSCOPY, SCANNING TUNNELING; NANOSPHERES; NUCLEIC ACID CONFORMATION; SPECTRUM ANALYSIS; STATIC ELECTRICITY;

EID: 79954455102     PISSN: 16136810     EISSN: 16136829     Source Type: Journal    
DOI: 10.1002/smll.201002213     Document Type: Article

References (34)

1. K. Gehring, J.-L. Leroy, M. Gueron, Nature 1993, 363, 561.
2. L. Chen, L. Cai, X. Zhang, A. Rich, Biochemistry 1994, 33, 13540.
3. C. H. Kang, I. Berger, C. Lockshin, R. Ratliff, R. Moyzis, A. Rich, Proc. Natl. Acad Sci. USA 1994, 91, 11636.
4. G. Laughlan, A. I. Murchie, D. G. Norman, M. H. Moore, P. C. Moody, D. M. Lilley, B. Luisi, Science 1994, 265, 520.
5. J. T. Davis, Angew. Chem. Int. Ed. 2004, 43, 668.
6. N. Khan, A. Avino, R. Tauler, C. Gonzalez, R. Eritja, R. Gargallo, Biochimie 2007, 89, 1562.
7. S. Nonin-Lecomte, J. L. Leroy, J. Mol. Biol. 2001, 309, 491.
8. A. T. Phan, M. Gueron, J.-L. Leroy, J. Mol. Biol. 2000, 299, 123.
9. T. Simonsson, M. Pribylova, M. Vorlickova, Biochem. Biophys. Res. Commun. 2000, 278, 158.
10. G. Manzini, N. Yathindra, L. E. Xodo, Nucleic Acids Res. 1994, 22, 4634.
11. S. Ahmed, A. Kintanar, E. Henderson, Nat. Struct. Mol. Biol. 1994, 1, 83.
12. P. Fojtik, M. Vorlickova, Nucleic Acids Res. 2001, 29, 4684.
13. P. Kumar, A. Verma, S. Maiti, R. Gargallo, S. Chowdhury, Biochemistry 2005, 44, 16426.
14. V. Mathur, A. Verma, S. Maiti, S. Chowdhury, Biochem. Biophy. Res. Commun. 2004, 320, 1220.
15. H. Liu, D. Liu, ChemInform 2009, 40, 2625.
16. T. Liedl, F. C. Simmel, Nano Lett. 2005, 5, 1894.
17. S. Modi, M. G. Swetha, D. Goswami, G. D. Gupta, S. Mayor, Y. Krishnan, Nat. Nanotechnol. 2009, 4, 325.
18. W. Shu, D. Liu, M. Watari, C. K. Riener, T. Strunz, M. E. Welland, S. Balasubramanian, R. A. McKendry, J. Am. Chem. Soc. 2005, 127, 17054.
19. W. Wang, H. Liu, D. Liu, Y. Xu, Yang, D. Zhou, Langmuir 2007, 23, 11956.
20. H. B. Ghodke, K. Ramya, V. Kasinath, G. V. P. Kumar, N. Chandrabhas, K. Yamuna, Angew. Chem. Int. Ed. 2007, 46, 2646.
21. A. B. Kotlyar, N. Borovok, T. Molotsky, H. Cohen, E. Shapir, D. Porath, Adv. Mater. 2005, 17, 1901.
22. N. Borovok, N. Iram, D. Zikich, J. Ghabboun, G. I. Livshits, D. Porath, A. B. Kotlyar, Nucleic Acids Res. 2008, 36, 5050.
23. A. B. Kotlyar, N. Borovok, T. Molotsky, L. Fadeev, M. Gozin, Nucleic Acids Res. 2005, 33, 525.
24. K. Halder, V. Mathur, D. Chugh, A. Verma, S. Chowdhury, Biochem. Biophys. Res. Commun. 2005, 327, 49.
25. C. Gomez-Navarro, F. Moreno-Herrero, P. J. de Pablo, J. Colchero, J. Gomez-Herrero, A. M. Baro, Proc. Natl. Acad. Sci. USA 2002, 99, 8484.
26. H. Cohen, T. Sapir, N. Borovok, T. Molotsky, R. Di Felice, A. B. Kotlyar, D. Porath, Nano Lett. 2007, 7, 981.
27. I. Medalsy, O. Dgany, M. Sowwan, H. Cohen, A. Yukashevska, S. G. Wolf, A. Wolf, A. Koster, O. Almog, I. Marton, Y. Pouny, A. Altman, O. Shoseyov, D. Porath, Nano Lett. 2008, 8, 473.
28. E. Shapir, H. Cohen, N. Borovok, A. B. Kotlyar, D. Porath, J. Phys. Chem. B 2006, 110, 4430.
29. E. Shapir, H. Cohen, A. Calzolari, C. Cavazzoni, D. A. Ryndyk, G. Cuniberti, A. Kotlyar, R. Di Felice, D. Porath, Nat. Mater. 2008, 7, 68.
30. E. Shapir, L. Sagiv, N. Borovok, T. Molotski, A. B. Kotlyar, D. Porath, J. Phys. Chem. B 2008, 112, 9267.
31. E. Shapir, J. Yi, H. Cohen, A. B. Kotlyar, G. Cuniberti, D. Porath, J. Phys. Chem. B 2005, 109, 14270.
32. A. Lebrun, R. Lavery, Nucleic Acids Res. 1996, 24, 2260.
33. C. R. Cantor, M. M. Warshaw, H. Shapiro, Biopolymers 1970, 9, 1059.
34. I. Horcas, R. Fernandez, J. M. Gomez-Rodriguez, J. Colchero, J. Gomez-Herrero, A. M. Baro, Rev. Sci. Instrum. 2007, 78, 013705.