Quantification of centimeter-scale spatial variation in PAH, glucose and benzoic acid mineralization and soil organic matter in road-side soil

Environmental Pollution

Volumn 159, Issue 5, 2011, Pages 1085-1091

  Hybholt, Trine K ^a   Aamand, Jens ^a   Johnsen, Anders R ^a  

^a GEOLOGICAL SURVEY OF DENMARK AND GREENLAND   (Denmark)

Author keywords

Geostatistics; PAH mineralization; Road side soil; Soil organic matter; Spatial heterogeneity

Indexed keywords

GEO-STATISTICS; PAH MINERALIZATION; ROAD-SIDE SOIL; SOIL ORGANIC MATTER; SPATIAL HETEROGENEITY;

BIOGEOCHEMISTRY; BIOLOGICAL MATERIALS; GLUCOSE; ORGANIC COMPOUNDS; ROADS AND STREETS; SOIL POLLUTION; SOILS;

MINERALOGY;

BENZOIC ACID; GLUCOSE; PHENANTHRENE; PYRENE; SOIL ORGANIC MATTER;

CARBON ISOTOPE; GEOSTATISTICS; GLUCOSE; HETEROGENEITY; MINERALIZATION; PAH; PHENANTHRENE; PYRENE; QUANTITATIVE ANALYSIS; SOIL ORGANIC MATTER; SOIL POLLUTION; SPATIAL VARIATION;

ARTICLE; BIOMINERALIZATION; GEOSTATISTICAL ANALYSIS; SOIL POLLUTION; SPATIAL SOIL VARIABILITY; URBAN AREA;

BENZOIC ACID; CARBON RADIOISOTOPES; GLUCOSE; ORGANIC CHEMICALS; POLYCYCLIC HYDROCARBONS, AROMATIC; SOIL; SOIL MICROBIOLOGY; SOIL POLLUTANTS;

EID: 79953784849     PISSN: 02697491     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.envpol.2011.02.028     Document Type: Article

References (31)

1. Barnes, R.J., Baxter, S.J., Lark, R.M., 2007. Spatial covariation of Azotobacter abundance and soil properties: a case study using the wavelet transform. Soil Biology and Biochemistry 39, 295-310. (Pubitemid 44738923)
2. Bastiaens, L., Springael, D., Wattiau, P., Harms, H., deWachter, R., Verachtert, H., Diels, L., 2000. Isolation of adherent polycyclic aromatic hydrocarbon (PAH)- degrading bacteria using PAH-sorbing carriers. Applied and Environmental Microbiology 66, 1834-1843. (Pubitemid 30253698)
3. Becker, J.M., Parkin, T., Nakatsu, C.H., Wilbur, J.D., Konopka, J.A., 2006. Bacterial activity, community structure, and centimeter-scale spatial heterogeneity in contaminated soil. Microbial Ecology 51, 220-231. (Pubitemid 43961435)
4. Biocatalysis/Biodegradation Database, 2010. University of Minnesota. http://umbbd. msi.umn.edu URL.
5. Campbell, C.D., Chapman, S.J., Cameron, C.M., Davidson, M.S., Potts, J.M., 2003. A rapid microtiter plate method to measure carbon dioxide evolved from carbon substrate amendments so as to determine the physiological profiles of soil microbial communities by using whole soil. Applied and Environmental Microbiology 69, 3593-3599. (Pubitemid 36693371)
6. Cebron, A., Norini, M.P., Beguiristain, T., Leyval, C., 2008. Real-time PCR quantification of PAH-ring hydroxylating dioxygenase (PAH-RHDα) genes from Gram positive and Gram negative bacteria in soil and sediment samples. Journal of Microbiological Methods 73, 148-159.
7. Efroymson, R.A., Alexander, M., 1991. Biodegradation by an Arthrobacter species of hydrocarbons partitioned into an organic solvent. Applied and Environmental Microbiology 57, 1441-1447.
8. Efroymson, R.A., Alexander, M., 1994. Biodegradation in soil of hydrophobic pollutants in nonaqueous-phase liquids (NAPLs). Environmental Toxicology and Chemistry 13, 405-411. (Pubitemid 24089852)
9. El Sebai, T., Lagacherie, B., Soulas, G., Martin-Laurent, F., 2007. Spatial variability of isoproturon mineralizing activity within an agricultural field: geostatistical analysis of simple physicochemical and microbiological soil parameters. Environmental Pollution 145, 680-690. (Pubitemid 46149172)
10. Furono, S., Päzolt, K., Rabe, C., Neu, T.R., Harms, H., Wick, L.Y., 2010. Fungal mycelia allow chemotactic dispersal of PAH degraders in water-unsaturated systems. Environmental Microbiology 12, 1391-1398.
11. Ghoshal, S., Ramashami, A., Luthy, R.G., 1996. Biodegradation of naphthalene from coal tar and heptamethylnonane in mixed batch systems. Environmental Science & Technology 30, 1282-1291. (Pubitemid 26100875)
12. Gonod, L.V., Chadoeuf, J., Chenu, C., 2006. Spatial distribution of microbial 2,4- dichlorophenoxy acetic acid mineralization from field to microhabitat scales. Soil Science Society of America Journal 70, 64-71. (Pubitemid 43199249)
13. --oxidizing bacteria and serotypes at the millimeter scale along a soil transect. FEMS Microbiology Ecology 34, 57-62.
14. Hill, P.W., Farrar, J.F., Jones, D.L., 2008. Decoupling of microbial glucose uptake and mineralization in soil. Soil Biology and Biochemistry 40, 616-624.
15. Ho, Y., Jackson, M., Yang, Y., Mueller, J.G., Pritchard, P.H., 2000. Characterization of fluoranthene- and pyrene-degrading bacteria isolated from PAH-contaminated soils and sediments and comparison of several Sphingomonas spp. Journal of Industrial Microbiology and Biotechnology 2, 100-112. (Pubitemid 30243602)
16. Johnsen, A.R., de Lipthay, J.R., Reichenberg, F., Sørensen, S.J., Andersen, O., Christensen, P., Binderup, M.L., Jacobsen, C.S., 2006. Biodegradation, bioaccessibility and genotoxicity of diffuse polycyclic aromatic hydrocarbon (PAH) pollution at amotorway site. Environmental Science &Technology 40, 3293-3298.
17. 14C]- compounds in a 96-well microplate format. Journal of Microbiological Methods 79, 114-116.
18. Johnsen, A.R., Karlson, U., 2007. Diffuse PAH contamination of surface soils: environmental occurrence, bioavailability, and microbial degradation. Applied Microbiology and Biotechnology 76, 533-543. (Pubitemid 47283119)
19. Johnsen, A.R., Schmidt, S., Hybholt, T.K., Henriksen, S., Jacobsen, C.S., Andersen, O., 2007. Strong impact on the polycyclic aromatic hydrocarbon (PAH)-degrading community of a PAH-polluted soil but marginal effect on PAH-degradation when priming with bioremediated soil dominated by Mycobacteria. Applied and Environmental Microbiology 73, 1474-1480. (Pubitemid 46417871)
20. Journel, A.G., Huijbergts, C.J., 1978. Mining Geostatistics. Academic Press, London.
21. Krivobok, S., Kuony, S., Meyer, C., Louwagie, M., Willison, J.C., Jouanneau, Y., 2003. Identification of pyrene-induced proteins in Mycobacterium sp. strain 6PY1: evidence for two ring-hydroxylating dioxygenases. Journal of Bacteriology 185, 3828-3841. (Pubitemid 36735934)
22. Lichtstein, H.C., Soule, M.H., 1944. Studies of the effect of sodium azide on microbic growth and respiration. Journal of Bacteriology 47, 253-257.
23. Philippot, L., Cuhel, J., Saby, P.A., Chèneby, D., Chronáková, A., Bru, D., Arrouays, D., Martin-Laurent, F., Simek, M., 2009. Mapping field-scale patterns of size and activity of the denitrifier community. Environmental Microbiology 1,1518-1526.
24. Price, O.R., Oliver, M., Walker, A., Wood, M., 2009. Estimating the spatial scale of herbicide and soil interactions by nested sampling, hierarchical analysis of variance and residual maximum likelihood. Environmental Pollution 157,1689-1696.
25. Schmidt, S.N., Christensen, J.H., Johnsen, A.R., 2010. Fungal PAH-metabolites resist mineralization by soil microorganisms. Environmental Science & Technology 44, 1677-1682.
26. Stenrød, M., Charnay, M.P., Benoiy, P., Eklo, O.M., 2006. Spatial variability of glyphosate mineralization and soil microbial characteristics in two Norwegian sandy loam soils as affected by surface topological features. Soil Biology and Biochemistry 38, 962-971.
27. Sørensen, S.R., Bending, B.D., Jacobsen, C.S., Walker, A., Aamand, J., 2003. Microbial degradation of isoproturon and related phenylurea herbicides in and below agricultural fields. FEMS Microbiology Ecology 45, 1-11. (Pubitemid 36694643)
28. Törneman, N., Yang, X., Bååth, E., Bengtsson, G., 2008. Spatial covariation of microbial community composition and polycyclic aromatic hydrocarbon composition in a creosote-polluted soil. Environmental Toxicology and Chemistry 27, 1039-1046. (Pubitemid 351684760)
29. Uyttebroek, M., Breugelmans, P., Janssen, M., Wattiau, P., Joffe, B., Karlson, U., Ortega-Calvo, J.J., Bastiaens, L., Ryngaert, A., Hausner, M., Springael, D., 2006. Distribution of the Mycobacterium community and polycyclic aromatic hydrocarbons (PAHs) among different size fractions of a long-term PAH-contaminated soil. Environmental Microbiology 8, 836-847.
30. Webster, R., 1985. Quantitative spatial analysis of soil in the field. In: Stewart, B.A. (Ed.), Advances in Soil Science. Springer, New York.
31. Wick, L.Y., Colangelo, T., Harms, H., 2001. Kinetics of mass-transfer limited bacterial growth on solid PAHs. Environmental Science & Technology 35, 354-361.