Monitoring surface chemical changes in the bacterial cell wall: Multivariate analysis of cryo-X-ray photoelectron spectroscopy data

Journal of Biological Chemistry

Volumn 286, Issue 14, 2011, Pages 12389-12396

  Ramstedt, Madeleine ^a   Nakao, Ryoma ^a,b   Wai, Sun Nyunt ^a   Uhlin, Bernt Eric ^a   Boily, Jean François ^a  

^a UMEÅ UNIVERSITY   (Sweden)

^b NATIONAL INSTITUTE OF INFECTIOUS DISEASES   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTICAL METHOD; BACTERIAL CELL SURFACE; BACTERIAL CELLS; BIOFILM FORMATION; BIOLOGICAL SAMPLES; CHEMICAL COMPOSITIONS; CHEMICAL INFORMATION; EXTERNAL STIMULUS; GRAM-NEGATIVE BACTERIA; GROWTH CONDITIONS; HOST TISSUES; LIPOPOLYSACCHARIDES; MICROBIOLOGICAL ASSAYS; MICROSCOPIC ANALYSIS; MULTI VARIATE ANALYSIS; MULTIVARIATE CURVE RESOLUTION ANALYSIS; OUTER MEMBRANE; OUTER MEMBRANE VESICLES; PEPTIDOGLYCANS; POLYSACCHARIDE CONTENTS; SURFACE CHEMICAL COMPOSITION; SURFACE CHEMICALS;

BACTERIOLOGY; CELL MEMBRANES; CHEMICAL ANALYSIS; ESCHERICHIA COLI; MULTIVARIANT ANALYSIS; PHOTOELECTRICITY; PHOTONS; SURFACE CHEMISTRY; X RAY PHOTOELECTRON SPECTROSCOPY;

BACTERIA;

OUTER MEMBRANE PROTEIN;

ANALYTIC METHOD; ARTICLE; BACTERIAL CELL WALL; BACTERIAL OUTER MEMBRANE; BIOFILM; CONTROLLED STUDY; GRAM NEGATIVE BACTERIUM; MEMBRANE VESICLE; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; X RAY PHOTOELECTRON SPECTROSCOPY;

CELL WALL; ESCHERICHIA COLI; LIPOPOLYSACCHARIDES; MULTIVARIATE ANALYSIS; PEPTIDOGLYCAN; PHOTOELECTRON SPECTROSCOPY;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA;

EID: 79953294707     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.209536     Document Type: Article

References (30)

1. Hancock, I. C. (1991) Microbial Cell Surface Analysis (Mozes, N., Handley, P. S., Busscher, H. J., and Rouxhet, P. G., eds) pp. 23-59, VCH Publishing, Inc., New York
2. Ohl, M. E., and Miller, S. I. (2001) Annu. Rev. Med. 52, 259-274
3. Saka, K., Tadenuma, M., Nakade, S., Tanaka, N., Sugawara, H., Nishikawa, K., Ichiyoshi, N., Kitagawa, M., Mori, H., Ogasawara, N., and Nishimura, A. (2005) DNA Res. 12, 63-68
4. Flemming, C. A., Palmer, R. J., Jr., Arrage, A. A., van der Mei, H. C., and White, D. C. (1998) Biofouling 13, 213-231
5. Sabra, W., Lûnsdorf, H., and Zeng, A. P. (2003) Microbiology 149, 2789-2795
6. Kadurugamuwa, J. L., Lam, J. S., and Beveridge, T. J. (1993) Antimicrob. Agents Chemother. 37, 715-721
7. Hoffman, L. R., D'Argenio, D. A., MacCoss, M. J., Zhang, Z., Jones, R. A., and Miller, S. I. (2005) Nature 436, 1171-1175
8. Dufrêne, Y. F., van der Wal, A., Norde, W., and Rouxhet, P. G. (1997) J. Bacteriol. 179, 1023-1028
9. Rouxhet, P. G., Misselyn-Bauduin, A. M., Ahimou, F., Genet, M. J., Adriaensen, Y., Desille, T., Bodson, P., and Deroanne, C. (2008) Surface Interface Anal. 40, 718-724
10. Ahimou, F., Boonaert, C. J., Adriaensen, Y., Jacques, P., Thonart, P., Paquot, M., and Rouxhet, P. G. (2007) J. Colloid Interface Sci. 309, 49-55
11. van der Mei, H. C., de Vries, J., and Busscher, H. J. (2000) Surface Sci. Rep. 39, 1-24
12. Ramstedt, M., Shchukarev, A. V., and Sjöberg, S. (2002) Surface Interface Anal. 34, 632-636
13. Leone, L., Loring, J., Sjöberg, S., Persson, P., and Shchukarev, A. (2006) Surface Interface Anal. 38, 202-205
14. Hochella, M. (1988) in Spectroscopic Methods in Mineralogy and Geology (Hawthorne, F. C., ed) pp. 573-637, Mineralogical Society of America, Washington, D. C.
15. Golub, G. H., and Reinsch, C. (1970) Numer. Math. 14, 403-420
16. Jaumot, J., Gargallo, R., de Juan, A., and Tauler, R. (2005) Chemometr. Intell. Lab. 76, 101-110
17. Beamson, G., and Briggs, D. (1992) High Resolution XPS of Organic Polymers: The Scienta ESCA300 Database, Wiley, Chichester, UK
18. Smit, J., Kamio, Y., and Nikaido, H. (1975) J. Bacteriol. 124, 942-958
19. Koplow, J., and Goldfine, H. (1974) J. Bacteriol. 117, 527-543
20. Ellis, T. N., and Kuehn, M. J. (2010) Microbiol. Mol. Biol. Rev. 74, 81-94
21. Metzler, D. E., and Metzler, C. M. (2001) Biochemistry: The Chemical Reactions of Living Cells, Vol. 2, Academic Press, San Diego, CA
22. Costerton, J. W., Ingram, J. M., and Cheng, K. J. (1974) Bacteriol. Rev. 38, 87-110
23. De Petris, S. (1967) J. Ultrastruct. Res. 19, 45-83
24. Strauss, J., Burnham, N. A., and Camesano, T. A. (2009) J. Mol. Recognit. 22, 347-355
25. Liu, D., and Reeves, P. R. (1994) Microbiology 140, 49-57
26. Shroll, R. M., and Straatsma, T. P. (2002) Biopolymers 65, 395-407
27. Yao, X., Jericho, M., Pink, D., and Beveridge, T. (1999) J. Bacteriol. 181, 6865-6875
28. Baba, T., Ara, T., Hasegawa, M., Takai, Y., Okumura, Y., Baba, M., Datsenko, K. A., Tomita, M., Wanner, B. L., and Mori, H. (2006) Mol. Systems Biol. 2, 2006.0008
29. Bielig, H., Rompikuntal, P. K., Mitesh D., Zurek, B., Lindmark, B., Ramstedt, M., Wai, S. N., and Kufer, T. A. (2011) Infect. Immun., in press
30. Mekalanos, J. J. (1983) Cell 35, 253-263