Morphological and molecular analysis of genetic variability within isolates of Corynespora cassiicola from different hosts

European Journal of Plant Pathology

Volumn 130, Issue 1, 2011, Pages 83-95

  Qi, Yan Xiang ^a,b   Zhang, Xin ^a,b   Pu, Jin Ji ^a,b   Liu, Xiao Mei ^c   Lu, Ying ^a,b   Zhang, He ^a,c   Zhang, Hui Qiang ^a,b   Lv, Yan Chao ^a,b   Xie, Yi Xian ^a,b  

^a AGRO ENVIRONMENTAL PROTECTION INSTITUTE   (China)

^b INSTITUTE OF TROPICAL BIOSCIENCE AND BIOTECHNOLOGY   (China)

^c HAINAN UNIVERSITY   (China)

Author keywords

Corynespora cassiicola; Inter simple sequence repeat (ISSR); Morphology; Plant pathogen

Indexed keywords

CLUSTER ANALYSIS; CORRELATION; FUNGUS; GENETIC MARKER; GENETIC VARIATION; MOLECULAR ANALYSIS; MORPHOLOGY; PATHOGENICITY; PHYLOGENETICS; RUBBER;

CARICA PAPAYA; CORYNESPORA; CORYNESPORA CASSIICOLA; CUCUMIS SATIVUS; HEVEA; HEVEA BRASILIENSIS; LYCOPERSICON ESCULENTUM; SESAMUM INDICUM; SOLANUM MELONGENA; VIGNA;

EID: 79953170872     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-010-9734-6     Document Type: Article

References (41)

1. Anonym. (1984). Comparative virulence of different isolates of Corynespora cassiicola. AVRDC Progress Report, 75-76.
2. Atan, S., & Hamid, N. H. (2003). Differentiating races of Corynespora cassiicola using RAPD and internal transcribed spacer markers. Journal of Rubber Research, 6, 58-64.
3. Blazquez, C. H. (1967). Corynespora leaf spot of cucumber. Proceedings of the Florida State Horticultural Society, 80, 177-182.
4. Bornet, B., & Branchard, M. (2001). Nonanchored inter simple sequence repeat (ISSR) markers: reproducible and specific tools for genome fingerprinting. Plant Molecular Biology Reporter, 19, 209-215.
5. Chee, K. H. (1988). Studies on sporulation, pathogenicity and epidemiology of Corynespora cassiicola on Hevea rubber. Journal Natural Rubber Research, 3, 21-29.
6. Darmono, T. W., Darussamin, A., & Pawirosoemardjo, S. (1996). Variation among isolates of Corynespora cassiicola associated with Hevea brasiliensis in Indonesia. In: Proceedings of the workshop on Corynespora leaf fall disease of Hevea rubber, 16-17 December, Medan, Indonesia, pp. 79-91.
7. Dixon, L. J., Schlub, R. L., Pernezny, K., & Datnoff, L. E. (2009). Host specialization and phylogenetic diversity of Corynespora cassiicola. Phytopathology, 99, 1015-1027.
8. Deighton, F. C. (1936). Preliminary list of fungi and diseases of plants in Sierra Leone. Kew Bulletin, 7, 397-424.
9. Duarte, M. L. R., Asano, S., & Albuquerque, F. C. (1981). Comparative study of the morphological and physical characteristics of two Corynespora cassiicola isolates. Fitopatologia Brasileira, 8, 205-214.
10. Ellis, M. B. & Holliday, P. (1971). Corynespora cassiicola. C. M. I. Description of Pathogenic Fungi and Bacteria, 303.
11. Fajola, A. O., & Alasoadura, S. O. (1973). Corynespora leaf spot, a new disease of tobacco (Nicotiana tabacum). Plant Disease Reporter, 57, 375-378.
12. Farr, D. F., Rossman, A. Y., Palm, M. E., & McCray, E. B. (2007). Fungal databases. Systematic Botany and Mycology Laboratory, ARS, USDA. Retrieved Dec 13, from http://nt. arsgrin. gov/fungal databases/.
13. Ismail, H., & Jeyanayagi, I. (1999). Occurrence and identification of physiological races of Corynespora cassiicola of Hevea. In Q. B. Chen & J. N. Zhou (Eds.), Proceedings of the IRRDB Symposium 1999 (pp. 263-272). Haikou: Hainnan Publishing House.
14. Jaccard, P. (1908). Nouvelles resecherches sur la distribution florale. Société Vaudoise des Sciences Naturelles, 44, 22-270.
15. Jones, J. P. (1961). A leaf spot of cotton caused by Corynespora cassiicola. Phytopathology, 51, 305-308.
16. Kilger, C., & Schmid, K. (1994). Rapid characterisarion of bacterial clones by microwave treatment and PCR. Trends in Genetics, 10, 49.
17. Kumar, S., Tamura, K., Jakobsen, I. B., & Nei, M. (2001). MEGA2: Molecular evolutionary genetics analysis software. Tempe: Arizona State University. MEGA version 4. 1 (Kumar et al., 2001) software packages.
18. Pavlicek, A., Hrda, S., & Flegr, J. (1999). FreeTree-Freeware program for construction of phylogenetic trees on the basis of distance data and bootstrap/jackknife analysis of the tree robustness. Application in the RAPD analysis of the genus Frenkelia. Folia Biologica (Praha), 45, 97-99.
19. Maclean, D. J., Braithwaite, K. S., Manners, J. M., & Irwin, J. A. G. (1993). How do we identify and classify fungal plant pathogens in the era of DNA analysis? Advances in Plant Pathology, 10, 207-244.
20. Miller, J. W., & Alfieri, S. A., Jr. (1973). Leaf spot of Ligustrum sinense caused by Corynespora cassiicola and its control. Phytopathology, 64, 255-256.
21. Mohanty, N. N., & Mohanty, N. W. (1955). Target spot of tomatoes. Science and Culture, 21, 330-332.
22. Nghia, N. A., Kadir, J., Sunderasan, E., Abdullah, M. P., Malik, A., & Napis, S. (2008). Morphological and Inter Simple Sequence Repeat (ISSR) markers analyses of Corynespora cassiicola isolates from rubber plantations in Malaysia. Mycopathologia, 166, 189-201. doi: 10. 1007/s11046-008-9138-8.
23. Olive, L. S., Baun, D. C., & Lefevbe, C. L. (1945). A leaf spot of cowpea and soybean caused by an undescribed species of Helminthosporium. Phytopathology, 50, 263-266.
24. Onesirosan, P. T., Arny, D. C., & Durbin, R. D. (1974). Host-specificity of Nigerian and North American isolates of Corynespora cassiicola. Phytopathology, 64, 1364-1367.
25. Othman, R., Benong, M., Ong, S. H., & Ismail, H. (1996). Strategies and development of resistant Hevea clones against Corynespora leaf fall. In: Proceeding workshop on Corynespora leaf fall disease of Hevea rubber, 16-17 December, Medan, Indonesia. pp. 177-194.
26. Pu, J. J., Zhang, X., Qi, Y. X., Xie, Y. X., Zhang, H. Q., & Zhang, H. (2007). First record of Corynespora leaf fall disease of Hevea rubber in China. Australasian Plant Disease Notes, 2, 35-36. doi: 10. 1071/DN07017.
27. Qi, Y. X., Xie, Y. X., Zhang, X., & Zhang, H. Q. (2005). Comparative study of genomic DNA from Fusarium oxysporum f. sp. cubense by SDS-CTAB and high-concentration-salt precipitation methods. China Biotechnology, 25, 49-52.
28. Qi, Y. X., Xie, Y. X., Zhang, X., Pu, J. J., Zhang, H. Q., Huang, S. L., et al. (2009a). Molecular and pathogenic variation identified among isolates of Corynespora cassiicola. Molecular Biotechnology, 41, 145-151. doi: 10. 1007/s12033-008-9109-9.
29. Qi, Y. X., Zhang, X., Pu, J. J., Xie, Y. X., Zhang, H. Q., Huang, S. L., et al. (2009b). Nested PCR assay for detection of Corynespora leaf fall disease caused by Corynespora cassiicola. Australasian Plant Pathology, 38, 141-148. doi: 10. 1071/AP08086.
30. Rohlf, F. J. (1998). NTSYS-pc: Numerical taxonomy and multivariate analysis system, version 2. 1. Applied Biostatics, New York.
31. Romruensukharom, P., Tragoonrung, S., Vanavichit, A., & Toojinda, T. (2005). Genetic variability of Corynespora cassiicola population in Thailand. Journal of Rubber Research, 8, 38-49.
32. Saha, T., Arun, K. A., Sreena, S., Joseph, A., Kuruvilla, J. C., Kothandaraman, R., et al. (2000). Genetic variability of Corynespora cassiicola infecting Hevea brasiliensis isolated from the traditional rubber growing areas in India. Indian Journal of Nature Rubber Research, 13, 1-10.
33. Sato, R., & Kitazawa, K. (1980). Occurrence of soybean root rot caused by Corynespora cassiicola (Berk. and Curt.) Wei in Hokkaido. Annals of the Phytopathological Society of Japan, 2, 193-199.
34. Seaman, W. L., & Shoermaker, R. A. (1964). Corynespora cassiicola on soybean in Ontario. Plant Disease Reporter, 48, 90.
35. Silva, W. P. K., Karunanayake, E. H., Wijesundera, R. L. C., & Priyanka, U. M. S. (2003). Genetic variation in Corynespora cassiicola: a possible relationship between host origin and virulence. Mycological Research, 107, 567-571. doi: 10. 1017/S0953756203007755.
36. Spencer, J. A., & Walters, H. J. (1969). Variations in certain isolates of Corynespora cassiicola. Phytopathology, 59, 58-60.
37. Stone, W. J., & Jone, J. P. (1960). Corynespora blight of seasame. Phytopathology, 50, 263-266.
38. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmouginand, J., & Higgins, D. G. (1997). The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 24, 4876-4882.
39. Toshiko, F., Kinjim, U., & Kunihei, K. (2008). Corynespora leaf spot of scarlet sage caused by Corynespora cassiicola. Journal of General Plant Pathology, 74, 117-119.
40. White, T. J., Bruns, T., Lee, S., & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In D. H. Gelfand, J. J. Sninsky, T. White, & M. Innis (Eds.), PCR protocols: A guide to methods and applications (pp. 315-322). USA: Academic.
41. Ziekiewicz, E., Rafalski, A., & Labuda, D. (1994). Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics, 20, 176-183.