RecA K72R filament formation defects reveal an oligomeric RecA species involved in filament extension

Journal of Biological Chemistry

Volumn 286, Issue 10, 2011, Pages 7830-7840

  Britt, Rachel L ^a   Chitteni Pattu, Sindhu ^a   Page, Asher N ^a   Cox, Michael M ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ATP HYDROLYSIS; FILAMENT ASSEMBLY; FILAMENT FORMATION; FUNCTIONAL EXTENSION; MUTANT PROTEINS; RECA FILAMENT; RECA PROTEINS; WILD TYPES;

DEFECTS; HYDROLYSIS; OLIGOMERS;

PROTEINS;

ADENOSINE TRIPHOSPHATASE; ADENOSINE TRIPHOSPHATE; BACTERIAL DNA; CIRCULAR DNA; DEOXYADENOSINE TRIPHOSPHATE; RECA PROTEIN; SINGLE STRANDED DNA;

ARTICLE; BACTERIAL CELL; BACTERIAL FILAMENT; BINDING AFFINITY; DNA DAMAGE; DNA REPAIR; ESCHERICHIA COLI; FILAMENT EXTENSION PHASE; MUTANT; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN FUNCTION; PROTEIN HYDROLYSIS; PROTEIN INTERACTION; PROTEIN VARIANT; WILD TYPE;

ADENOSINE TRIPHOSPHATE; AMINO ACID SUBSTITUTION; DNA; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; HYDROLYSIS; MUTATION, MISSENSE; PROTEIN MULTIMERIZATION; REC A RECOMBINASES;

EID: 79953136232     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.194407     Document Type: Article

References (65)

1. Brendel, V., Brocchieri, L., Sandler, S. J., Clark, A. J., and Karlin, S. (1997) J. Mol. Evol. 44, 528-541
2. Bishop, D. K., Park, D., Xu, L., and Kleckner, N. (1992) Cell 69, 439-456
3. Shinohara, A., Gasior, S., Ogawa, T., Kleckner, N., and Bishop, D. K. (1997) Genes to Cells 2, 615-629
4. Seitz, E. M., Brockman, J. P., Sandler, S. J., Clark, A. J., and Kowalczykowski, S. C. (1998) Genes Dev. 12, 1248-1253
5. Ogawa, T., Yu, X., Shinohara, A., and Egelman, E. H. (1993) Science 259, 1896-1899
6. Sung, P. (1994) Science 265, 1241-1243
7. Lusetti, S. L., and Cox, M. M. (2002) Ann. Rev. Biochem. 71, 71-100
8. Chen, Z., Yang, H., and Pavletich, N. P. (2008) Nature 453, 489-494
9. Heuser, J., and Griffith, J. (1989) J. Mol. Biol. 210, 473-484
10. Egelman, E. H., and Stasiak, A. (1986) J. Mol. Biol. 191, 677-697
11. Cox, M. M. (2003) Annu. Rev. Microbiol. 57, 551-577
12. Haruta, N., Yu, X., Yang, S., Egelman, E. H., and Cox, M. M. (2003) J. Biol. Chem. 278, 52710-52723
13. Kowalczykowski, S. C., Clow, J., and Krupp, R. A. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 3127-3131
14. Pugh, B. F., and Cox, M. M. (1987) J. Biol. Chem. 262, 1326-1336
15. Pugh, B. F., and Cox, M. M. (1988) J. Mol. Biol. 203, 479-493
16. Galletto, R., Amitani, I., Baskin, R. J., and Kowalczykowski, S. C. (2006) Nature 443, 875-878
17. van Loenhout, M. T., van der Heijden, T., Kanaar, R., Wyman, C., and Dekker, C. (2009) Nucleic Acids Res. 37, 4089-4099
18. Kowalczykowski, S. C., and Krupp, R. A. (1987) J. Mol. Biol. 193, 97-113
19. Thresher, R. J., Christiansen, G., and Griffith, J. D. (1988) J. Mol. Biol. 201, 101-113
20. Joo, C., McKinney, S. A., Nakamura, M., Rasnik, I., Myong, S., and Ha, T. (2006) Cell 126, 515-527
21. Cox, M. M. (2007) Crit. Rev. Biochem. Mol. Biol. 42, 41-63
22. Menetski, J. P., and Kowalczykowski, S. C. (1989) Biochemistry 28, 5871-5881
23. Eggler, A. L., Lusetti, S. L., and Cox, M. M. (2003) J. Biol. Chem. 278, 16389-16396
24. Witkin, E. M., McCall, J. O., Volkert, M. R., and Wermundsen, I. E. (1982) Mol. Gen. Genet. 185, 43-50
25. Lavery, P. E., and Kowalczykowski, S. C. (1992) J. Biol. Chem. 267, 20648-20658
26. Register, J. C., 3rd, and Griffith, J. (1985) J. Biol. Chem. 260, 12308-12312
27. Shan, Q., Bork, J. M., Webb, B. L., Inman, R. B., and Cox, M. M. (1997) J. Mol. Biol. 265, 519-540
28. Roca, A. I., and Cox, M. M. (1997) Prog. Nucleic Acid Res. Mol. Biol. 56, 129-223
29. Bork, J. M., Cox, M. M., and Inman, R. B. (2001) J. Biol. Chem. 276, 45740-45743
30. Arenson, T. A., Tsodikov, O. V., and Cox, M. M. (1999) J. Mol. Biol. 288, 391-401
31. Brenner, S. L., Mitchell, R. S., Morrical, S. W., Neuendorf, S. K., Schutte, B. C., and Cox, M. M. (1987) J. Biol. Chem. 262, 4011-4016
32. Cox, M. M. (2004) in The Bacterial Chromosome (Higgins, N. P., ed) pp. 369-388, American Society for Microbiology, Washington, D. C.
33. Cox, M. M. (2007) Nat. Rev. Mol. Cell Biol. 8, 127-138
34. Walker, J. E., Saraste, M., Runswick, M. J., and Gay, N. J. (1982) EMBO J. 1, 945-951
35. Cox, J. M., Abbott, S. N., Chitteni-Pattu, S., Inman, R. B., and Cox, M. M. (2006) J. Biol. Chem. 281, 12968-12975
36. Campbell, M. J., and Davis, R. W. (1999) J. Mol. Biol. 286, 417-435
37. Campbell, M. J., and Davis, R. W. (1999) J. Mol. Biol. 286, 437-445
38. Rehrauer, W. M., and Kowalczykowski, S. C. (1993) J. Biol. Chem. 268, 1292-1297
39. Sung, P., Higgins, D., Prakash, L., and Prakash, S. (1988) EMBO J. 7, 3263-3269
40. Dombroski, A. J., Brennan, C. A., Spear, P., and Platt, T. (1988) J. Biol. Chem. 263, 18802-18809
41. Myles, G. M., Hearst, J. E., and Sancar, A. (1991) Biochemistry 30, 3824-3834
42. Seeley, T. W., and Grossman, L. (1989) Proc. Natl. Acad. Sci. U.S.A. 86, 6577-6581
43. Seeley, T. W., and Grossman, L. (1990) J. Biol. Chem. 265, 7158-7165
44. Cox, M. M., and Lehman, I. R. (1981) Proc. Natl. Acad. Sci. U.S.A. 78, 3433-3437
45. Shan, Q., Cox, M. M., and Inman, R. B. (1996) J. Biol. Chem. 271, 5712-5724
46. Shan, Q., and Cox, M. M. (1996) J. Mol. Biol. 257, 756-774
47. Shan, Q., and Cox, M. M. (1997) J. Biol. Chem. 272, 11063-11073
48. Britt, R. L., Haruta, N., Lusetti, S. L., Chitteni-Pattu, S., Inman, R. B., and Cox, M. M. (2010) J. Biol. Chem. 285, 3211-3226
49. Drees, J. C., Lusetti, S. L., Chitteni-Pattu, S., Inman, R. B., and Cox, M. M. (2004) Mol. Cell 15, 789-798
50. Renzette, N., and Sandler, S. J. (2008) Mol. Microbiol. 67, 1347-1359
51. Gruenig, M. C., Renzette, N., Long, E., Chitteni-Pattu, S., Inman, R. B., Cox, M. M., and Sandler, S. J. (2008) Mol. Microbiol. 69, 1165-1179
52. Petrova, V., Chitteni-Pattu, S., Drees, J. C., Inman, R. B., and Cox, M. M. (2009) Mol. Cell 36, 121-130
53. Lohman, T. M., Green, J. M., and Beyer, R. S. (1986) Biochemistry 25, 21-25
54. Craig, N. L., and Roberts, J. W. (1981) J. Biol. Chem. 256, 8039-8044
55. Bindslev, N. (2008) Drug-Acceptor Interactions: Modeling Theoretical Tools to Test and Evaluate Experimental Equilibrium Effects, Co-Action Publishing, Stockholm, Sweden
56. Lusetti, S. L., Wood, E. A., Fleming, C. D., Modica, M. J., Korth, J., Abbott, L., Dwyer, D. W., Roca, A. I., Inman, R. B., and Cox, M. M. (2003) J. Biol. Chem. 278, 16372-16380
57. Morrical, S. W., Lee, J., and Cox, M. M. (1986) Biochemistry 25, 1482-1494
58. Lindsley, J. E., and Cox, M. M. (1990) J. Biol. Chem. 265, 9043-9054
59. Bochner, B. R., and Ames, B. N. (1982) J. Biol. Chem. 257, 9759-9769
60. Cox, J. M., Tsodikov, O. V., and Cox, M. M. (2005) PLoS Biol. 3, 231-243
61. Cox, M. M., and Lehman, I. R. (1982) J. Biol. Chem. 257, 8523-8532
62. Menetski, J. P., and Kowalczykowski, S. C. (1987) J. Biol. Chem. 262, 2093-2100
63. Takahashi, M. (1989) J. Biol. Chem. 264, 288-295
64. Stasiak, A., Di Capua, E., and Koller, T. (1981) J. Mol. Biol. 151, 557-564
65. Menetski, J. P., and Kowalczykowski, S. C. (1985) J. Mol. Biol. 181, 281-295