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Volumn 79, Issue 3, 2011, Pages 102-113

Inference on the strength of balancing selection for epistatically interacting loci

Author keywords

Balancing selection; Epistatic interactions; Statistical inference

Indexed keywords

ALGORITHM; ALLELE; ANTAGONISM; EPISTASIS; GENOTYPE; IMMUNE SYSTEM; MARKOV CHAIN; MUTATION; SYNERGISM; THEORETICAL STUDY;

EID: 79953028407     PISSN: 00405809     EISSN: 10960325     Source Type: Journal    
DOI: 10.1016/j.tpb.2011.01.002     Document Type: Article
Times cited : (7)

References (35)
  • 1
    • 60149103563 scopus 로고    scopus 로고
    • The pseudo-marginal approach for efficient Monte Carlo computations
    • Andrieu C., Roberts G.O. The pseudo-marginal approach for efficient Monte Carlo computations. Annals of Statistics 2009, 37:697-725.
    • (2009) Annals of Statistics , vol.37 , pp. 697-725
    • Andrieu, C.1    Roberts, G.O.2
  • 2
    • 0043210659 scopus 로고    scopus 로고
    • Estimation of population growth or decline in genetically monitored populations
    • Beaumont M.A. Estimation of population growth or decline in genetically monitored populations. Genetics 2003, 164:1139-1160.
    • (2003) Genetics , vol.164 , pp. 1139-1160
    • Beaumont, M.A.1
  • 3
    • 68249120662 scopus 로고    scopus 로고
    • Maximum likelihood estimates under k-allele models with selection can be numerically unstable
    • Buzbas E.O., Joyce P. Maximum likelihood estimates under k-allele models with selection can be numerically unstable. Annals of Applied Statistics 2009, 3:1147-1162.
    • (2009) Annals of Applied Statistics , vol.3 , pp. 1147-1162
    • Buzbas, E.O.1    Joyce, P.2
  • 5
    • 8644285268 scopus 로고    scopus 로고
    • Empirical supremum rejection sampling
    • Caffo B.S., Booth J.G., Davison A.C. Empirical supremum rejection sampling. Biometrika 2002, 89:745-754.
    • (2002) Biometrika , vol.89 , pp. 745-754
    • Caffo, B.S.1    Booth, J.G.2    Davison, A.C.3
  • 7
    • 0034754512 scopus 로고    scopus 로고
    • Likelihood and simulation methods for a class of nonneutral population genetics models
    • Donnelly P., Nordborg M., Joyce P. Likelihood and simulation methods for a class of nonneutral population genetics models. Genetics 2001, 159:853-867.
    • (2001) Genetics , vol.159 , pp. 853-867
    • Donnelly, P.1    Nordborg, M.2    Joyce, P.3
  • 8
    • 0024528762 scopus 로고
    • Diffusion approximations of the two-locus Wright-Fisher model
    • Ethier S.N., Nagylaki T. Diffusion approximations of the two-locus Wright-Fisher model. Journal of Mathematical Biology 1989, 27:17-28.
    • (1989) Journal of Mathematical Biology , vol.27 , pp. 17-28
    • Ethier, S.N.1    Nagylaki, T.2
  • 10
    • 0034898704 scopus 로고    scopus 로고
    • Perfect simulation of population genetic models with selection
    • Fearnhead P. Perfect simulation of population genetic models with selection. Theoretical Population Biology 2001, 59:263-279.
    • (2001) Theoretical Population Biology , vol.59 , pp. 263-279
    • Fearnhead, P.1
  • 11
    • 33749243154 scopus 로고    scopus 로고
    • The stationary distribution of allele frequencies when selection acts at unlinked loci
    • Fearnhead P. The stationary distribution of allele frequencies when selection acts at unlinked loci. Theoretical Population Biology 2006, 70:376-386.
    • (2006) Theoretical Population Biology , vol.70 , pp. 376-386
    • Fearnhead, P.1
  • 12
    • 34249798263 scopus 로고    scopus 로고
    • Computation of the normalizing constant for exponentially weighted Dirichlet distribution integrals
    • Genz A., Joyce P. Computation of the normalizing constant for exponentially weighted Dirichlet distribution integrals. Computing Science and Statistics 2003, 35:557-563.
    • (2003) Computing Science and Statistics , vol.35 , pp. 557-563
    • Genz, A.1    Joyce, P.2
  • 15
    • 0032426345 scopus 로고    scopus 로고
    • Natural selection at major histocompatibility complex loci of vertebrates
    • Hughes A.L., Yeager M. Natural selection at major histocompatibility complex loci of vertebrates. Annual Review of Genetics 1998, 32:415-435.
    • (1998) Annual Review of Genetics , vol.32 , pp. 415-435
    • Hughes, A.L.1    Yeager, M.2
  • 16
    • 29144525031 scopus 로고    scopus 로고
    • High level functional polymorphism indicates a unique role of natural selection at human immune system loci
    • Hughes A.L., Packer B., Welch R., Chanock S.J., Yeager M. High level functional polymorphism indicates a unique role of natural selection at human immune system loci. Immunogenetics 2005, 57:821-827.
    • (2005) Immunogenetics , vol.57 , pp. 821-827
    • Hughes, A.L.1    Packer, B.2    Welch, R.3    Chanock, S.J.4    Yeager, M.5
  • 18
    • 0001493328 scopus 로고
    • Genetic equilibrium when more than one ecological niche is available
    • Levene H. Genetic equilibrium when more than one ecological niche is available. American Naturalist 1953, 87:331-333.
    • (1953) American Naturalist , vol.87 , pp. 331-333
    • Levene, H.1
  • 21
    • 0034744361 scopus 로고    scopus 로고
    • How selection shapes variation of the human major histocompatibility complex: a review
    • Meyer D., Thomson G. How selection shapes variation of the human major histocompatibility complex: a review. Annals of Human Genetics 2001, 65:1-26.
    • (2001) Annals of Human Genetics , vol.65 , pp. 1-26
    • Meyer, D.1    Thomson, G.2
  • 25
    • 0030006049 scopus 로고    scopus 로고
    • Population biology of antigen presentation by MHC class I Molecules
    • Parham P., Ohta T. Population biology of antigen presentation by MHC class I Molecules. Science 1996, 272:67-74.
    • (1996) Science , vol.272 , pp. 67-74
    • Parham, P.1    Ohta, T.2
  • 28
    • 0033388724 scopus 로고    scopus 로고
    • Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism
    • Sette A., Sidney J. Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism. Immunogenetics 1999, 50:201-212.
    • (1999) Immunogenetics , vol.50 , pp. 201-212
    • Sette, A.1    Sidney, J.2
  • 32
    • 0036215134 scopus 로고    scopus 로고
    • KIR: Diverse, rapidly evolving receptors of Innate and Adaptive immunity
    • Vilches C., Parham P. KIR: Diverse, rapidly evolving receptors of Innate and Adaptive immunity. Annual Review of Immunology 2002, 20:217-251.
    • (2002) Annual Review of Immunology , vol.20 , pp. 217-251
    • Vilches, C.1    Parham, P.2
  • 33
    • 0017642207 scopus 로고
    • Heterosis or neutrality?
    • Watterson G.A. Heterosis or neutrality?. Genetics 1977, 85:789-814.
    • (1977) Genetics , vol.85 , pp. 789-814
    • Watterson, G.A.1
  • 34
    • 0002920493 scopus 로고
    • Adaptation and selection
    • Princeton Univ. Press, Princeton, NJ, G.L. Jepson, G.G. Simpson, E. Mayr (Eds.)
    • Wright S. Adaptation and selection. Genetics, Paleontology, and Evolution, p. 383 1949, 365-389. Princeton Univ. Press, Princeton, NJ. G.L. Jepson, G.G. Simpson, E. Mayr (Eds.).
    • (1949) Genetics, Paleontology, and Evolution, p. 383 , pp. 365-389
    • Wright, S.1
  • 35
    • 34548757361 scopus 로고    scopus 로고
    • Haplotype inference for present-absent genotype data using previously identified haplotypes and haplotype patterns
    • Yoo Y.J., Tang J., Kaslow R.A., Zhang K. Haplotype inference for present-absent genotype data using previously identified haplotypes and haplotype patterns. Bioinformatics 2007, 23:2399-2406.
    • (2007) Bioinformatics , vol.23 , pp. 2399-2406
    • Yoo, Y.J.1    Tang, J.2    Kaslow, R.A.3    Zhang, K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.