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Volumn 10, Issue 1, 2011, Pages 119-127

Biocircuit design through engineering bacterial logic gates

Author keywords

Biocircuit; Cell cell communication; Logic gate; Synthetic biology

Indexed keywords

DNA;

EID: 79952758982     PISSN: 15677818     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11047-010-9184-2     Document Type: Conference Paper
Times cited : (16)

References (28)
  • 1
    • 0141484562 scopus 로고    scopus 로고
    • The Tinkerer as an engineer science
    • U Alon 2003 The Tinkerer as an engineer science Biol Netw 301 5641 1866 1867
    • (2003) Biol Netw , vol.301 , Issue.5641 , pp. 1866-1867
    • Alon, U.1
  • 2
    • 4043107641 scopus 로고    scopus 로고
    • Biological laser printing of genetically modified Escherichia coli for biosensor applications
    • DOI 10.1016/j.bios.2004.01.011, PII S0956566304000296
    • JA Barron R Rosen J Jones-Meehan BJ Spargo S Belkin BR Ringeisen 2004 Biological laser printing of genetically modified Escherichia coli for biosensor applications Biosens Bioelectron 20 2 246 252 10.1016/j.bios.2004.01.011 (Pubitemid 39077628)
    • (2004) Biosensors and Bioelectronics , vol.20 , Issue.2 , pp. 246-252
    • Barron, J.A.1    Rosen, R.2    Jones-Meehan, J.3    Spargo, B.J.4    Belkin, S.5    Ringeisen, B.R.6
  • 3
    • 34548747486 scopus 로고    scopus 로고
    • Robustness analysis and tuning of synthetic gene networks
    • DOI 10.1093/bioinformatics/btm362
    • G Batt B Yordanov R Weiss C Belta 2007 Robustness analysis and tuning of synthetic gene networks Syst Biol 23 18 2415 2422 (Pubitemid 47423839)
    • (2007) Bioinformatics , vol.23 , Issue.18 , pp. 2415-2422
    • Batt, G.1    Yordanov, B.2    Weiss, R.3    Belta, C.4
  • 4
    • 31944434718 scopus 로고    scopus 로고
    • Advances in preservation methods: Keeping biosensor microorganisms alive and active
    • DOI 10.1016/j.copbio.2005.12.005, PII S0958166905001965, Analytical Biotechnology
    • J Bjerketorp S Hkansson S Belkin JK Jansson 2006 Advances in preservation methods: keeping biosensor microorganisms alive and active Curr Opin Biotechnol 17 1 43 49 10.1016/j.copbio.2005.12.005 (Pubitemid 43190756)
    • (2006) Current Opinion in Biotechnology , vol.17 , Issue.1 , pp. 43-49
    • Bjerketorp, J.1    Hakansson, S.2    Belkin, S.3    Jansson, J.K.4
  • 6
    • 67649887149 scopus 로고    scopus 로고
    • Robust synthetic biology design: Stochastic game theory approach
    • 10.1093/bioinformatics/btp310
    • BS Chen CH Chang HC Lee 2009 Robust synthetic biology design: stochastic game theory approach Bioinformatics 25 14 1822 1830 10.1093/bioinformatics/ btp310
    • (2009) Bioinformatics , vol.25 , Issue.14 , pp. 1822-1830
    • Chen, B.S.1    Chang, C.H.2    Lee, H.C.3
  • 8
    • 0033591467 scopus 로고    scopus 로고
    • Bacterial biofilms: A common cause of persistent infections
    • DOI 10.1126/science.284.5418.1318
    • JW Costerton PS Stewart EP Greenberg 1999 Bacterial biofilms: a common cause of persistent infections Science 284 1318 1322 10.1126/science.284.5418. 1318 (Pubitemid 29289651)
    • (1999) Science , vol.284 , Issue.5418 , pp. 1318-1322
    • Costerton, J.W.1    Stewart, P.S.2    Greenberg, E.P.3
  • 9
    • 57549101206 scopus 로고    scopus 로고
    • Bacteria as computers making computers
    • 2520505 10.1111/j.1574-6976.2008.00137.x
    • A Danchin 2009 Bacteria as computers making computers FEMS Microbiol Rev 33 1 3 26 2520505 10.1111/j.1574-6976.2008.00137.x
    • (2009) FEMS Microbiol Rev , vol.33 , Issue.1 , pp. 3-26
    • Danchin, A.1
  • 12
    • 0020724032 scopus 로고
    • Bacterial bioluminescence: Isolation and genetic analysis of functions from Vibrio fischeri
    • 10.1016/0092-8674(83)90063-6
    • J Engebrecht K Nealson M Silverman 1983 Bacterial bioluminescence: isolation and genetic analysis of functions from Vibrio fischeri Cell 32 773 781 10.1016/0092-8674(83)90063-6
    • (1983) Cell , vol.32 , pp. 773-781
    • Engebrecht, J.1    Nealson, K.2    Silverman, M.3
  • 13
    • 0027957161 scopus 로고
    • Quorum sensing in bacteria: The LuxR-LuxI family of cell density- responsive transcriptional regulators
    • WC Fuqua SC Winans EP Greenberg 1994 Quorum sensing in bacteria: the LuxR-LuxI family of cell density-responsive transcriptional regulators J Bacteriol 176 269 275 (Pubitemid 24034041)
    • (1994) Journal of Bacteriology , vol.176 , Issue.2 , pp. 269-275
    • Fuqua, W.C.1    Winans, S.C.2    Greenberg, E.P.3
  • 14
    • 79952755667 scopus 로고    scopus 로고
    • Biosignal-based computing by AHL induced synthetic gene regulatory networks. from an in vivo flip-flop implementation to programmable computing agents
    • 10.2976/1.2968443
    • T Hinze T Lenser N Matsumaru P Dittrich S Hayat 2008 Biosignal-based computing by AHL induced synthetic gene regulatory networks. From an in vivo flip-flop implementation to programmable computing agents HFSP J 2 5 239 243 10.2976/1.2968443
    • (2008) HFSP J , vol.2 , Issue.5 , pp. 239-243
    • Hinze, T.1    Lenser, T.2    Matsumaru, N.3    Dittrich, P.4    Hayat, S.5
  • 15
    • 33745725673 scopus 로고    scopus 로고
    • The effect of negative feedback on noise propagation in transcriptional gene networks
    • DOI 10.1063/1.2208927
    • S Hooshangi R Weiss 2006 The effect of negative feedback on noise propagation in transcriptional gene networks Chaos 16 2 26108 10.1063/1.2208927 (Pubitemid 44000351)
    • (2006) Chaos , vol.16 , Issue.2 , pp. 026108
    • Hooshangi, S.1    Weiss, R.2
  • 16
    • 0031811851 scopus 로고    scopus 로고
    • RegulonDB: A database on transcriptional regulation in Escherichia coli
    • DOI 10.1093/nar/26.1.55
    • AM Huerta H Salgado D Thieffry J Collado-Vides 1998 RegulonDB: a database on transcriptional regulation in Escherichia coli Nucleic Acids Res 26 1 55 59 10.1093/nar/26.1.55 (Pubitemid 28291559)
    • (1998) Nucleic Acids Research , vol.26 , Issue.1 , pp. 55-59
    • Huerta, A.M.1    Salgado, H.2    Thieffry, D.3    Collado-Vides, J.4
  • 17
    • 67649863552 scopus 로고    scopus 로고
    • From analysis of complex networks to discovery of cis-regulatory elements methods
    • R Janky J van Heiden M Madan Babu 2009 From analysis of complex networks to discovery of cis-regulatory elements methods Investig Transcr Regul 48 3 277 286
    • (2009) Investig Transcr Regul , vol.48 , Issue.3 , pp. 277-286
    • Janky, R.1    Van Heiden, J.2    Madan Babu, M.3
  • 18
    • 50249153550 scopus 로고    scopus 로고
    • Bacterial quorum sensing: Signals, circuits, and implications for biofilms and disease
    • 10.1146/annurev.bioeng.10.061807.160536
    • A Jayaraman TK Wood 2008 Bacterial quorum sensing: signals, circuits, and implications for biofilms and disease Annu Rev Biomed Eng 10 145 67 10.1146/annurev.bioeng.10.061807.160536
    • (2008) Annu Rev Biomed Eng , vol.10 , pp. 145-67
    • Jayaraman, A.1    Wood, T.K.2
  • 20
    • 0030908719 scopus 로고    scopus 로고
    • 22 for expression of the alginate regulon in Pseudomonas aeruginosa and localization of its antagonist proteins MucA and MucB (AlgN)
    • K Mathee CJ McPherson DE Ohman 1997 Posttranslational control of the algT (algU)-encoded sigma22 for expression of the alginate regulon in Pseudomonas aeruginosa and localization of its antagonist proteins MucA and MucB (AlgN) J Bacteriol 179 11 3711 3720 (Pubitemid 27233014)
    • (1997) Journal of Bacteriology , vol.179 , Issue.11 , pp. 3711-3720
    • Mathee, K.1    McPherson, C.J.2    Ohman, D.E.3
  • 23
    • 54249113318 scopus 로고    scopus 로고
    • Higher-Order cellular information processing with synthetic RNA devices
    • 10.1126/science.1160311
    • M Nyan ChD Smolke 2008 Higher-Order cellular information processing with synthetic RNA devices Science 322 5900 456 460 10.1126/science.1160311
    • (2008) Science , vol.322 , Issue.5900 , pp. 456-460
    • Nyan, M.1    Chd, S.2
  • 24
    • 38049049900 scopus 로고    scopus 로고
    • A model of the quorum sensing system in Vibrio fischeri
    • 10.1162/artl.2008.14.1.95
    • FJ Romero-Campero MJ Perez-Jimenez 2008 A model of the quorum sensing system in Vibrio fischeri Artif Life 14 1 95 109 10.1162/artl.2008.14.1.95
    • (2008) Artif Life , vol.14 , Issue.1 , pp. 95-109
    • Romero-Campero, F.J.1    Perez-Jimenez, M.J.2
  • 25
    • 33748846417 scopus 로고    scopus 로고
    • Transcriptional regulatory networks in bacteria: from input signals to output responses
    • DOI 10.1016/j.mib.2006.08.007, PII S1369527406001299, Antimicrobials/Genomics
    • ASN Seshasayee P Bertone GM Fraser NM Luscombe 2006 Transcriptional regulatory networks in bacteria: from input signals to output responses Curr Opin Microbiol 9 5 511 519 10.1016/j.mib.2006.08.007 (Pubitemid 44419503)
    • (2006) Current Opinion in Microbiology , vol.9 , Issue.5 , pp. 511-519
    • Seshasayee, A.S.1    Bertone, P.2    Fraser, G.M.3    Luscombe, N.M.4
  • 26
    • 60149089144 scopus 로고    scopus 로고
    • Regulatory RNAs in bacteria
    • 10.1016/j.cell.2009.01.043
    • G Storz L Waters 2009 Regulatory RNAs in bacteria Cell 136 4 615 628 10.1016/j.cell.2009.01.043
    • (2009) Cell , vol.136 , Issue.4 , pp. 615-628
    • Storz, G.1    Waters, L.2
  • 28
    • 38549146907 scopus 로고    scopus 로고
    • DBD-taxonomically broad transcription factor predictions: New content and functionality
    • D Wilson V Charoensawan SK Kummerfeld SA Teichmann 2008 DBD-taxonomically broad transcription factor predictions: new content and functionality Nucleic Acids Res 36 Database issue D88 D92
    • (2008) Nucleic Acids Res , vol.36 , Issue.DATABASE ISSUE
    • Wilson, D.1    Charoensawan, V.2    Kummerfeld, S.K.3    Teichmann, S.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.