Phylogeny and evolution of Indo-Pacific shrimp-associated gobies (Gobiiformes: Gobiidae)

Molecular Phylogenetics and Evolution

Volumn 59, Issue 1, 2011, Pages 168-176

  Thacker, Christine E ^a   Thompson, Andrew R ^b   Roje, Dawn M ^a,c  

^a NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY   (United States)

^b NOAA EARTH SYSTEM RESEARCH LABORATORY   (United States)

^c DIVISION OF INVERTEBRATE ZOOLOGY   (United States)

Author keywords

Amblyeleotris; Cryptocentrus; Evolution; Mahidolia; Mutualism; Symbiosis

Indexed keywords

CYTOCHROME C OXIDASE; DNA BINDING PROTEIN; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE; RHO FACTOR; V(D)J RECOMBINATION ACTIVATING PROTEIN 2;

ANIMAL; ARTICLE; BAYES THEOREM; CHEEK; CLASSIFICATION; DECAPODA (CRUSTACEA); DNA SEQUENCE; EVOLUTION; GENETICS; HISTOLOGY; INDIAN OCEAN; MOLECULAR GENETICS; PACIFIC OCEAN; PERCIFORMES; PHYLOGENY; SEQUENCE ALIGNMENT; SPECIES DIFFERENTIATION; SYMBIOSIS;

ANIMALS; BAYES THEOREM; BIOLOGICAL EVOLUTION; CHEEK; DECAPODA (CRUSTACEA); DNA-BINDING PROTEINS; ELECTRON TRANSPORT COMPLEX IV; GENETIC SPECIATION; INDIAN OCEAN; MOLECULAR SEQUENCE DATA; NADH DEHYDROGENASE; PACIFIC OCEAN; PERCIFORMES; PHYLOGENY; RHO FACTOR; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SYMBIOSIS;

ALPHEIDAE; AMBLYELEOTRIS; AMBLYELEOTRIS WHEELERI; ANTHOZOA; CALLOGOBIUS ATRATUS; CALLOGOBIUS SCLATERI; CRYPTOCENTRUS; CTENOGOBIOPS; DECAPODA (CRUSTACEA); GOBIIDAE; PISCES; VANDERHORSTIA;

EID: 79952736102     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2011.02.007     Document Type: Article

References (62)

1. Akihito, Meguro K. Myersina nigrivirgata, a new species of shrimp goby from Okinawa Prefecture in Japan. Jpn. J. Ichthyol. 1983, 29:343-348.
2. Allen G., Steene R., Humann P., Deloach N. Reef Fish Identification: Tropical Pacific 2003, New World Publications, Jacksonville, Florida.
3. Böhlke J., Robins C. Western Atlantic seven-spined gobies, with descriptions of ten new species and a new genus, and comments on Pacific relatives. Proc. Acad. Nat. Sci. Phila. 1968, 120:45-174.
4. Boucher D.H., James S., Keeler K.H. The ecology of mutualism. Ann. Rev. Ecol. Syst. 1982, 13:315-347.
5. Bradbury J.W., Vehrencamp S.L. Principles of Animal Communication 1998, Sinauer Associates, Inc.
6. Chen I.-S., Fang L.-S. A new marine goby of genus Flabelligobius (Teleostei: Gobiidae) from Taiwan. Ichthyol. Res. 2003, 50:333-338.
7. Chen J.-P., Chen I.-S., Shao K.-T. Review of the marine gobiid genus Amblyeleotris (Pisces: Gobiidae) with seven new records from Taiwan. Zool. Stud. 1998, 37(2):111-118.
8. Chen W.-J., Bonillo C., Lecointre G. Repeatability of clades as a criterion of reliability: a case study for molecular phylogeny of Acanthomorpha (Teleostei) with larger number of taxa. Mol. Phyl. Evol. 2003, 26:262-288.
9. Connor R.C. The benefits of mutualism: a conceptual framework. Biol. Rev. 1995, 70:427-457.
10. Cote I.M. Evolution and ecology of cleaning symbioses in the sea. Ocean. Mar. Biol. 2000, 38:311-355.
11. Cummins, R.A., 1979. Ecology of Gobiid Fishes Associated with Alpheid Shrimps at One Tree Reef. Ph.D. Thesis, University of Sydney, Australia.
12. Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl. Acid Res. 2004, 32:1792-1797.
13. Fautin D.G., Allen G.R. Anemonefishes and their Host Sea Anemones 1997, Western Australian Museum, Perth, Australia. revised ed.
14. Foster K.R., Wenseleers T. A general model for the evolution of mutualisms. J. Evol. Biol. 2006, 19:1283-1293.
15. Goodale E., Beauchamp G., Magrath R.D., Nieh J.C., Ruxton G.D. Interspecific information transfer influences animal community structure. Trends Ecol. Evol. 2010, 25:354-361.
16. Harada E. On the interspecific association of a snapping shrimp and gobioid fishes. Pub. Seto Mar. Biol. Lab. 1969, XXVI(5):315-334.
17. Hayashi, M., Shiratori, T., 2003. Gobies of Japanese Waters. TBS Buritanica, Tokyo (in Japanese).
18. Hoese D., Larson H.K. Description of a new species of Cryptocentrus (Teleostei: Gobiidae) from northern Australia, with comments on the genus. Beagle, Rec. Mus. Art Gal. North. Ter. 2004, 20:167-174.
19. Hoese D., Lubbock R. A review of the genus Myersina (Pisces: Gobiidae), with the description of a new species. Aust. Zool. 1982, 21(1):47-54.
20. Hoese D., Randall J.E. Revision of the gobiid fish genus Stonogobiops. Indo-Pacific Fishes 1982, 1:1-18.
21. Hoese D., Steene R. Amblyeleotris randalli, a new species of gobiid fish living in association with alpheid shrimps. Rec. West. Aust. Mus. 1978, 6(4):379-389.
22. Huelsenbeck J.P., Ronquist F. MRBAYES: Bayesian inference of phylogeny. Bioinformatics 2001, 17:754-755.
23. Iwata A., Ohnishi N., Hirata T. Tomiyamichthys alleni: a new species of Gobiidae from Japan and Indonesia. Copeia 2000, 2000(3):771-776.
24. Karplus I. The association between gobiid fishes and burrowing alpheid shrimps. Oceanogr. Mar. Biol. Ann. Rev. 1987, 25:507-562.
25. Karplus I. Obligatory and facultative goby-shrimp partnerships in the western tropical Atlantic. Symbiosis 1992, 12:275-291.
26. Karplus I., Tsurnamal M., Szlep R., Algom D. Film analysis of the tactile communication between Cryptocentrus steinitzi (Pisces, Gobiidae) and Alpheus purpurilenticularis (Crustaceae, Alpheidae). Z. Tierpsychol. 1979, 49:337-351.
27. Karplus I., Szlep R., Tsurnamal M. Goby-shrimp partner specificity I: distribution in the northern Red-Sea and partner specificity. J. Exp. Mar. Biol. Ecol. 1981, 51:1-19.
28. Karplus I., Thompson A.R. The partnership between gobiid fishes and burrowing alpheid shrimps. Biology of Gobies 2011, Science Publishers, Inc. R.A. Patzner, J.L. Van Tassell, M. Kovacic, B.G. Kapoor (Eds.).
29. Karplus I., Vercheson A. A method for collecting live alpheid shrimp and their symbiotic gobiid fish partners. Crustaceana 1978, 34:220-221.
30. Kawakita A., Kato M. Repeated independent evolution of obligate pollination mutualism in the Phyllantheae-Epicephala association. Proc. Roy. Soc. B 2009, 276:417-426.
31. Klausewitz W. Fische aus dem Roten Meer IV. Einige systematisch und ökologisch bemerkenswerte Meergrundeln (Pisces, Gobiidae). Senck. Biol. 1960, 41(3/4):149-162.
32. Kramer A., Van Tassell J.L., Patzner R.A. A comparative study of two goby shrimp associations in the Caribbean Sea. Symbiosis 2009, 49:137-141.
33. Lachner E.A., McKinney J.F. A new fish species of the genus Vanderhorstia (Teleostei: Gobiidae) from the Amirante Islands, Indian Ocean. Proc. Biol. Soc. Wash. 1980, 93(4):963-970.
34. Larson, H.K., Lim, K.K.P., 2005. A guide to the gobies of Singapore. Singapore Science Center, 164 p.
35. Miller, D.J., Lea, R.N., 1972. Guide to the Coastal Marine Fishes of California, California Department of Fish and Game Fish Bulletin 157.
36. Mohlmann M.S., Randall J.E. Three new species of gobiid fishes of the genus Amblyeleotris from the central and western Pacific. Raffles Bull. Zool. 2002, 50(1):215-226.
37. Myers, R.F., 1999. Micronesian Reef Fishes: A Comprehensive Guide to the Coral Reef Fishes of Micronesia, third ed. Coral Graphics, Guam.
38. Palumbi, S.R., 1996. Nucleic acids II: the polymerase chain reaction. In: Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Molecular Systematics, second ed. Sinauer and Associates, Sunderland, MA.
39. Pellmyr O. Why is active pollination so rare?. Ecology 1997, 78:1655-1660.
40. Pellmyr O., Kren H.W. Origin of a complex key innovation in an obligate insect-plant mutualism. PNAS 2002, 99:5498-5502.
41. Pellmyr O., Thompson J.N., Brown J.M., Harrison R.G. Evolution of pollination and mutualism in the yucca moth lineage. Am. Nat. 1996, 148:827-847.
42. Polunin N.V.C., Lubbock R. Prawn-associated gobies (Teleostei: Gobiidae) from the Seychelles, Western Indian Ocean: systematics and ecology. J. Zool. Lond. 1977, 183:63-101.
43. Posada D. jModelTest: phylogenetic model averaging. Mol. Biol. Evol. 2008, 25(7):1253-1256.
44. Randall J.E., Lobel P.S., Kennedy C.W. Comparative ecology of the gobies Nes longus and Ctenogobius saepepallens, both symbiotic with the snapping shrimp Alpheus floridanus. Env. Biol. Fish. 2005, 74:119-127.
45. Randall J.E., Chen I.-S. Tomiyamichthys tanyspilus, a new species of gobiid fish from Indonesia. Zool. Stud. 2007, 46(6):651-655.
46. Randall J.E., Shao K.-T., Chen J.-P. A review of the Indo-Pacific gobiid fish genus Ctenogobiops, with descriptions of two new species. Zool. Stud. 2003, 42(4):506-515.
47. Ronquist F., Huelsenbeck J.P. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
48. Sachs J.L., Mueller U.G., Wilcox T.P., Bull J.J. The evolution of cooperation. Q. Rev. Biol. 2004, 79:135-160.
49. Santini S., Polacco G. Finding Nemo: Molecular phylogeny and evolution of the unusual life style of anemonefish. Gene 2006, 385:19-27.
50. Satapoomin U., Winterbottom R. Redescription of the gobioid fish Cryptocentrus pavoninoides (Bleeker, 1849), with notes on sexual dichromatism in shrimp gobies. Aqua 2002, 5(2):53-64.
51. Schultz T.R., Brady S.G. Major evolutionary transitions in ant agriculture. PNAS 2008, 105:5435-5440.
52. Shibukawa K., Suzuki T. Vanderhorstia papilio, a new shrimp-associated goby from the Ryukyu Islands, Japan (Perciformes: Gobiidae: Gobiinae), with comments on the limits of the genus. Ichthyol. Res. 2004, 51:113-119.
53. Smith J.L.B. An interesting new gobioid fish from Madagascar, with a note on Cryptocentrus oni Tomiyama, 1936. Ann. Mag. Nat. Hist. 1956, 9:554-556.
54. Syms C., Jones G.P. Habitat structure, disturbance and the composition of sand-dwelling goby assemblages in a coral reef lagoon. Mar. Ecol. Prog. Ser. 2004, 268:221-230.
55. Thacker C.E. Molecular phylogeny of the gobioid fishes (Teleostei: Perciformes: Gobioidei). Mol. Phyl. Evol. 2003, 26:354-368.
56. Thacker C.E., Hardman M.A. Molecular phylogenetics of basal gobioid fishes: Rhyacichthyidae, Odontobutidae, Xenisthmidae, Eleotridae (Teleostei: Perciformes: Gobioidei). Mol. Phyl. Evol. 2005, 37(3):858-871.
57. Thacker C.E. Phylogeny of Gobiodei and placement within Acanthomorpha, with a new classification and investigation of diversification and character evolution. Copeia 2009, 93-104.
58. Thacker C.E., Thompson A.R., Adam T.C., Chen J.-P. Phylogeny and character evolution in the Indo-Pacific genus Ctenogobiops (Gobiiformes: Gobiidae). Ichthy. Res. 2010, 57:231-239.
59. Thompson A.R. Dynamics of demographically open mutualists: immigration, intraspecific competition, and predation impact goby populations. Oecologia 2005, 143:61-69.
60. Thompson A.R., Nisbet R.M., Schmitt R.J. Dynamics of mutualist populations that are demographically open. J. Anim. Ecol. 2006, 75:1239-1251.
61. Trench R.K. Microalgal-invertebrate symbioses - a review. Endocyto. Cell. Res. 1993, 9:135-175.
62. Winterbottom R. A redescription of Cryptocentrus crocatus Wongratana, a redefinition of Myersina Herre (Acanthopterygii: Gobiidae), a key to the species, and comments on relationships. Ichthyol. Res. 2001, 49:69-75.