메뉴 건너뛰기




Volumn 6, Issue 1, 2011, Pages 81-87

Answering biological questions: Querying a systems biology database for nutrigenomics

Author keywords

Bioinformatics; Biological databases; Nutrigenomics; Querying; Systems biology

Indexed keywords

ACCESS TO INFORMATION; ARTICLE; BIOINFORMATICS; COMPUTER SYSTEM; INFORMATION PROCESSING; INFORMATION RETRIEVAL; MEDICAL RESEARCH; NUTRIGENOMICS; NUTRITIONAL PHENOTYPE DATABASE; REFERENCE DATABASE; SYSTEMS BIOLOGY;

EID: 79952631092     PISSN: 15558932     EISSN: 18653499     Source Type: Journal    
DOI: 10.1007/s12263-010-0190-x     Document Type: Article
Times cited : (5)

References (18)
  • 1
    • 53349143997 scopus 로고    scopus 로고
    • Word sense disambiguation in biomedical ontologies with term co-occurrence analysis and document clustering
    • 10.1504/IJDMB.2008.020522 10.1504/IJDMB.2008.020522 19024494
    • B Andreopoulos D Alexopoulou M Schroeder 2008 Word sense disambiguation in biomedical ontologies with term co-occurrence analysis and document clustering Int J Data Min Bioinform 2 3 193 215 10.1504/IJDMB.2008.020522 10.1504/IJDMB.2008.020522 19024494
    • (2008) Int J Data Min Bioinform , vol.2 , Issue.3 , pp. 193-215
    • Andreopoulos, B.1    Alexopoulou, D.2    Schroeder, M.3
  • 2
    • 13244249628 scopus 로고    scopus 로고
    • Visualization and analysis of microarray and gene ontology data with treemaps
    • DOI 10.1186/1471-2105-5-84
    • EH Baehrecke N Dang N Babaria B Shneiderman 2004 Visualization and analysis of microarray and gene ontology data with treemaps BMC Bioinformatics 5 84 10.1186/1471-2105-5-84 10.1186/1471-2105-5-84 15222902 (Pubitemid 40195419)
    • (2004) BMC Bioinformatics , vol.5 , pp. 84
    • Baehrecke, E.H.1    Dang, N.2    Babaria, K.3    Shneiderman, B.4
  • 3
    • 76549126453 scopus 로고    scopus 로고
    • Using pathway signatures as means of identifying similarities among microarray experiments
    • 10.1371/journal.pone.0004128 10.1371/journal.pone.0004128
    • L Beltrame L Rizzetto R Paola P Rocca-Serra L Gambineri C Battaglia D Cavalieri 2009 Using pathway signatures as means of identifying similarities among microarray experiments PLoS ONE 4 1 4128 10.1371/journal.pone.0004128 10.1371/journal.pone.0004128
    • (2009) PLoS ONE , vol.4 , Issue.1 , pp. 4128
    • Beltrame, L.1    Rizzetto, L.2    Paola, R.3    Rocca-Serra, P.4    Gambineri, L.5    Battaglia, C.6    Cavalieri, D.7
  • 5
    • 45749093727 scopus 로고    scopus 로고
    • Toward a standards-compliant genomic and metagenomic publication record
    • Mary Ann Liebert Inc. doi: 10.1089
    • Garrity GM, Field D, Kyrpides N, Hirschman L, Sanson S, Angiuoli S, Cole JR, Glöckner FO, Kolker E, Kowalchuk G, Moran MA, Ussery D, White O (2008) Toward a standards-compliant genomic and metagenomic publication record. OMICS 12(2), Mary Ann Liebert Inc. doi: 10.1089
    • (2008) OMICS , vol.12 , Issue.2
    • Garrity Gm, F.1
  • 6
    • 58149365542 scopus 로고    scopus 로고
    • Toward principles for the design of ontologies used for knowledge sharing
    • TR Gruber 1998 Toward principles for the design of ontologies used for knowledge sharing Int J Hum Comput Stud 43 5-6 907 928
    • (1998) Int J Hum Comput Stud , vol.43 , Issue.56 , pp. 907-928
    • Gruber, T.R.1
  • 8
    • 68149137101 scopus 로고    scopus 로고
    • Mining biological pathways using WikiPathways web services
    • 10.1371/journal.pone.0006447 10.1371/journal.pone.0006447
    • T Kelder AR Pico K Hanspers MP van Iersel C Evelo BR Conklin 2009 Mining biological pathways using WikiPathways web services PLoS One 4 7 07 10.1371/journal.pone.0006447 10.1371/journal.pone.0006447
    • (2009) PLoS One , vol.4 , Issue.7 , pp. 07
    • Kelder, T.1    Pico, A.R.2    Hanspers, K.3    Van Iersel, M.P.4    Evelo, C.5    Conklin, B.R.6
  • 11
    • 58349107900 scopus 로고    scopus 로고
    • MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB
    • 10.1093/bioinformatics/btn617 1:CAS:528:DC%2BD1MXntFWhtA%3D%3D 10.1093/bioinformatics/btn617 19038988
    • TF Rayner F Ibne Rezwan M Lukk X Zheng Bradley A Farne E Holloway J Malone E Williams H Parkinson 2009 MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB Bioinformatics 25 2 279 280 10.1093/bioinformatics/btn617 1:CAS:528:DC%2BD1MXntFWhtA%3D%3D 10.1093/bioinformatics/btn617 19038988
    • (2009) Bioinformatics , vol.25 , Issue.2 , pp. 279-280
    • Rayner, T.F.1    Ibne Rezwan, F.2    Lukk, M.3    Zheng Bradley, X.4    Farne, A.5    Holloway, E.6    Malone, J.7    Williams, E.8    Parkinson, H.9
  • 12
    • 77956548952 scopus 로고    scopus 로고
    • ISA software suite: Supporting standards-compliant experimental annotation and enabling curation at the community level
    • 10.1093/bioinformatics/btq415 1:CAS:528:DC%2BC3cXhtFGhu7rM 10.1093/bioinformatics/btq415 20679334
    • P Rocca-Serra M Brandizi E Maguire N Sklyar C Taylor K Begley F Field S Harris W Hide O Hofmann S Neumann P Sterk W Tong SA Sansone 2010 ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level Bioinformatics 26 18 2354 2356 10.1093/bioinformatics/btq415 1:CAS:528:DC%2BC3cXhtFGhu7rM 10.1093/ bioinformatics/btq415 20679334
    • (2010) Bioinformatics , vol.26 , Issue.18 , pp. 2354-2356
    • Rocca-Serra, P.1    Brandizi, M.2    Maguire, E.3    Sklyar, N.4    Taylor, C.5    Begley, K.6    Field, F.7    Harris, S.8    Hide, W.9    Hofmann, O.10    Neumann, S.11    Sterk, P.12    Tong, W.13    Sansone, S.A.14
  • 17
    • 77349123063 scopus 로고    scopus 로고
    • The BridgeDb framework: Standardized access to gene, protein and metabolite identifier mapping services
    • 10.1186/1471-2105-11-5 20047655
    • MP van Iersel AR Pico T Kelder J Gao I Ho K Hanspers BR Conklin CT Evelo 2010 The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services BMC Bioinformatics 11 1 5 10.1186/1471-2105-11-5 20047655
    • (2010) BMC Bioinformatics , vol.11 , Issue.1 , pp. 5
    • Van Iersel, M.P.1    Pico, A.R.2    Kelder, T.3    Gao, J.4    Ho, I.5    Hanspers, K.6    Conklin, B.R.7    Evelo, C.T.8
  • 18
    • 77958104174 scopus 로고    scopus 로고
    • Challenges of molecular nutrition research 6: The nutritional phenotype database to store, share and evaluate nutritional systems biology studies. the nutritional phenotype database to store, share and evaluate nutritional systems biology studies
    • 10.1007/s12263-010-0167-9 10.1007/s12263-010-0167-9 21052526
    • B van Ommen J Bouwman L Dragsted CA Drevon R Elliott P de Groot J Kaput JC Mathers M Muller F Pepping J Saito A Scalbert M Radonjic P Rocca-Serra T Travis S Wopereis CT Evelo 2010 Challenges of molecular nutrition research 6: the nutritional phenotype database to store, share and evaluate nutritional systems biology studies. The nutritional phenotype database to store, share and evaluate nutritional systems biology studies Genes and Nutrition 5 189 203 10.1007/s12263-010-0167-9 10.1007/s12263-010-0167-9 21052526
    • (2010) Genes and Nutrition , vol.5 , pp. 189-203
    • Van Ommen, B.1    Bouwman, J.2    Dragsted, L.3    Drevon, C.A.4    Elliott, R.5    De Groot, P.6    Kaput, J.7    Mathers, J.C.8    Muller, M.9    Pepping, F.10    Saito, J.11    Scalbert, A.12    Radonjic, M.13    Rocca-Serra, P.14    Travis, T.15    Wopereis, S.16    Evelo, C.T.17


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.